KEGG   Oryctolagus cuniculus (rabbit): 100349532
Entry
100349532         CDS       T03373                                 
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    100349532
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ocu03400]
    100349532
DNA repair and recombination proteins [BR:ocu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     100349532
SSDB
Motif
Pfam: Tyr-DNA_phospho RMMBL
Other DBs
NCBI-GeneID: 100349532
NCBI-ProteinID: XP_002719650
Ensembl: ENSOCUG00000002106
UniProt: G1SGT8
LinkDB
Position
20:complement(15132274..15219576)
AA seq 609 aa
MSQEGNYGKWTISSSDESEDEKPKLDKPSTSAPPHAGQGTACEPRYTCSEARKAAHRRQA
SPVRFSNTDSASPPKKQKSGSQGDLGWCLSSSDDEVSPESQPKQAKEAVGCEEPDVSSPR
DGTAQTGGNHGPAASHRLKEEGEDKHETAGEGQDLWDMLDRGNPFRFYLTRVSGIKPKYN
SGALHIKDILSPLFGTLVSSAQFNYCFDVDWLIKQYPPEFRRKPILLVHGDKREAKAHLH
AQAKPYENIALCQAKLDIAFGTHHTKMMLLLYEEGLRVVIHTSNLIHEDWHQKTQGIWLS
PLYPRLVHGTHRSGESTTHFKADLISYLMAYNAPSLQEWIDTIHGHDLSETNVYLIGSTP
GRFQGNQKDNWGHFRLRKLLKEHTSSVPQAESWPIVGQFSSIGSLGADESKWLCSEFKES
LLTLGQASRTAGKSTVPLHLIYPSVENVRTSLEGYPAGGSLPYSIQTAEKQNWLHSYFHK
WSAETSGRSNAMPHIKTYMRPSPDFSKIAWFLVTSANLSKAAWGALEKNGTQLMIRSYEL
GVLFLPATFGLDSFNVKQKFFSSHQEPAAAFPVPYDLPPELYGSKDRPWIWNIPYVKAPD
THGNMWVPS
NT seq 1830 nt   +upstreamnt  +downstreamnt
atgtctcaggaaggtaattacgggaagtggacaatatccagtagtgatgagagtgaggac
gaaaagccgaaactggacaagccatccacttctgcccctccccacgccgggcaaggcaca
gcatgtgagccaaggtacacctgttctgaggctcgcaaagctgcgcacaggagacaggcg
tcccctgtgagattcagcaacacagattcggcttcacctcccaaaaagcaaaaaagtggt
tcccagggagacctgggctggtgtctctccagcagcgacgatgaggtctccccagagtcc
cagccaaagcaggccaaggaagccgtgggctgcgaggagccagacgtctcttctcccaga
gacggcactgcccagacaggtggaaatcacggccctgctgccagccacaggctcaaagag
gagggggaagacaagcatgagacggcgggggaaggccaggacctttgggacatgttggat
cgagggaaccccttccgcttttacctcactagagtctcgggaatcaagcccaagtacaac
tccggagccctccacatcaaggatattttatctcctctatttgggacacttgtttcttca
gcgcagtttaactactgcttcgatgtggactggctcataaaacagtacccaccagagttc
aggaggaaacccatcctgctggtgcatggtgataaacgagaggccaaggctcacttacat
gcccaggccaagccttacgaaaacattgccctctgccaggcaaagttagatattgcgttt
ggaacacatcacacgaaaatgatgctgctgctttatgaggaaggcctccgggttgtcatc
cacacctccaacctcatccacgaggactggcaccagaaaactcaggggatatggttgagc
cccttgtacccacgacttgtccatggaacccacagatctggagaatcgacaacacatttt
aaagctgatctcatcagttatttgatggcttacaatgctccttctctccaggagtggata
gacaccatccatgggcatgacctctctgaaacaaacgtttaccttattggttcaaccccg
ggacgctttcaaggaaatcaaaaagataattggggacattttaggctgaggaagcttctg
aaagaacacacctcgtccgtcccccaggccgagtcctggcccatcgtgggccagttttct
agcattggctccttgggggctgatgagtcaaagtggctctgctcggagtttaaagagagt
ttgctgaccctggggcaggcaagcaggactgcagggaaaagcaccgttcctctgcatttg
atctatccttctgtggaaaatgtgcggaccagcttagaaggatatcctgctgggggctct
cttccctatagcatccagacagctgaaaaacagaattggctgcattcctattttcacaaa
tggtcagccgagacatctggccgcagcaacgccatgccacatattaagacctacatgagg
ccctctccagacttcagcaaaattgcttggttccttgtcacaagcgccaatctgtccaag
gccgcctggggcgcgctggagaagaacggcacccagctgatgatccgctcctacgagctt
ggggtcctcttcctccctgctacatttggcctggacagcttcaacgtgaaacagaaattc
ttctccagtcaccaggagccagcagctgccttccctgtgccgtatgatctgcccccagaa
ctgtatggaagtaaagatcggccgtggatttggaacatcccttacgtcaaagcgccagac
acacatgggaacatgtgggtgccctcctga

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