KEGG   Oryctolagus cuniculus (rabbit): 100349566
Entry
100349566         CDS       T03373                                 
Name
(RefSeq) synphilin-1 isoform X1
  KO
K04558  synphilin-1
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu05012  Parkinson disease
ocu05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05012 Parkinson disease
    100349566
   05022 Pathways of neurodegeneration - multiple diseases
    100349566
SSDB
Motif
Pfam: SNCAIP_SNCA_bd Ank_2 Ank_4 Ank Ank_5 Ank_3
Other DBs
NCBI-GeneID: 100349566
NCBI-ProteinID: XP_051700087
Ensembl: ENSOCUG00000008627
LinkDB
Position
3:6532817..6698551
AA seq 968 aa
MEAPEYLDLDEIDFSDDISYSVTSLKTIPELCRRCDSQNEDRSVSGSGWNCGVSTLITNT
QKPTGIADVYSKFRPVKRVSPLKHQPETLDSNESDDQKNQKGDLQKGGDSDAGPQPEELG
PEEGVGGLPGKGSEPSPALGELEHYDLDMDEILDVPYIKSNQQLASFSKVASDKRILGLC
TTINGLATGKACCAGGAENPPPTTTPFCVLSPVKSPHLRKASTAIRDQHKLGPEESESAP
ALVSCVSAYEPETQSRDFPNKAFAEPHGGKAEKALPDCQLRAFRLPCSAAEATLEEQVNG
VSWPTCQGPEEKTEHQKKVKSILNIVREGQISLLPHLAADNLDKIHDENGNNLLHIAASQ
GHAECLQHLTSLMGEDGLNERNAGKLTPAGLAIKNGQLECVRWMVSETEAIAELSCSRDF
PSLIHYAGCYGQEKILLWLLQFMQEQGISLDEVDQDGNSAVHVASQHGFLGCIQTLVEYG
ANVTMQNHAGEKPSQSAERHGHTLCSRYLVVVETCMSLASQVVKLTKQLKEQTVERVTLQ
TQLQQLLEAQKTEGKSLPSSPSSPSSPASKTAQWKAPDTDEESAARTKPGIQEGIQVLGS
LSAASRARAKAKDEDSDKILRQLLGKEISENVCTQEKLSLEFQDAQTSRNPKKIPAEKRE
LKLARLRQLMQRSLSESDTDPTNPEDPKSTPVRKSDRPRPQPIVESVEGAEGTESLHLMI
KKHSLASGRRFPFGIKASRSLDGHSPSPTSESCEADLESQYPGPGSAPPSQAPGDPTQPS
PDSPAAQKVATSPKSALKSPSSKRRTSQNLKLRVTFEEPVVQMEQTSPDPSGERDKDRGR
TLPRTSPGSESGDQLKRPFGTFRSIMETLSGNQNNSNNYQVASQLKTSTLPLTSLGRKTT
DAKGSPVSSAGKGKNKAGLFGSCVSLSSNTLTEEHLPGCARPNDISRKMKKSYSIKHIAE
PEPEELFL
NT seq 2907 nt   +upstreamnt  +downstreamnt
atggaagcccctgaataccttgatttggatgaaatagacttcagcgatgacatatcttat
tcagtcacgtcgctcaagaccatcccagaactgtgccgaagatgcgattcacaaaacgaa
gacagatcagtttccggctctggctggaattgtggcgtctcaactcttattaccaacaca
cagaagcccaccgggatcgccgatgtatatagcaagttccgcccggtgaaacgggtttcc
ccactgaaacaccagccggagaccctggacagcaatgaaagcgatgatcaaaagaaccag
aagggggacctccagaaagggggtgattctgatgcaggcccccagcctgaggagctgggc
cccgaagagggagtcgggggcctgcctgggaagggctcggagcccagcccggcgctgggc
gagctggagcactatgacctcgacatggatgagatcctggatgtgccttacatcaagtcc
aaccaacagcttgcctctttcagcaaggtggcttcagacaaaaggattttgggtttatgc
acgaccatcaacggcctcgccaccggcaaagcctgctgtgcaggaggtgccgagaaccca
ccacccaccacaacgcccttctgtgtcctgtctcccgtgaaaagccctcacctgagaaaa
gcatccactgccatccgcgatcagcacaagctgggcccggaagaatctgagagcgcgccc
gctctggtttcttgtgtctctgcgtatgagcctgagacccagagcagagacttcccaaac
aaggccttcgcagaaccacatggcggaaaggccgagaaggcactgcccgactgccagctc
cgggccttccgcctgccgtgctcggccgcagaagccacgctggaggagcaggtcaacggc
gtgagctggcccacttgccagggccccgaggagaagactgagcaccagaagaaagtcaag
agcatcctgaacattgtcagagaagggcagatctcgctcctgccacacctcgccgcagac
aacctggacaagattcacgacgagaacgggaacaacctgctgcacatcgccgcctcgcag
ggccacgccgagtgcctgcagcacctcacctccctcatgggggaagacggcctcaatgag
cgcaacgcgggcaagctgacccccgcgggcctggccatcaagaacggccagctggagtgt
gtgcgctggatggtgagtgagacggaagccatcgcagagctgagttgttccagggacttc
cccagcctcatccattacgcgggctgctatggccaggaaaagattctgctctggctcctc
cagtttatgcaagagcagggcatctcactggacgaagtggaccaggacggcaacagtgct
gttcacgtggcctcgcagcacggcttcctgggctgcatacagaccctggtggaatacgga
gcaaacgtcaccatgcagaaccatgcgggggagaagccatcccagagcgccgagcggcat
ggccacaccctgtgctcccggtacctggtggtggtcgagacctgcatgtcactggcctca
caagtggtgaagctgaccaagcagctcaaggaacagacggtggagcgcgtcaccctccag
acccagctccagcagcttctggaagcccagaagacagagggcaagtcactcccctcctcg
cccagctcgccatcctcaccggcttccaaaacagcacagtggaaggccccagacacagat
gaggagtccgcggccaggaccaagccggggatccaagaagggattcaggtgctcggcagc
ctgtccgcggccagccgcgccagggccaaagccaaagacgaagattctgataaaatcctg
cgtcagttactggggaaagaaatctcagaaaatgtctgcacccaagagaagctgtccttg
gaattccaggatgctcagacttctagaaatccaaagaagatcccggcggagaagagggag
ctgaagttggccaggctgagacagctgatgcagaggtctctgagtgagtccgacacagac
cccaccaaccctgaggaccccaaaagcaccccagtgaggaagtccgacaggcccaggcca
cagcccatcgtggagagcgtggaaggcgcggagggcaccgagagcttgcacctgatgata
aagaaacacagcttggcctcgggacgcaggtttccttttggtatcaaggcctccagatcc
ctggatggccacagcccttctcccacctcagagagctgcgaagcggacctggaatcccag
tacccaggccccgggagcgctcctccaagccaggcccctggagaccccactcagcccagc
cccgacagccctgcagcccagaaagtggccaccagtcccaagagcgccctcaagtctcca
tcttccaagcgccggacatctcagaacttgaaactcagagtgacttttgaggagcccgtg
gtgcagatggagcaaacaagccctgacccaagtggggagagagacaaagacaggggcagg
accctccctcggacctccccggggagcgagtccggggatcagctgaaaaggccttttggg
accttccggtccatcatggagacactaagtggcaaccagaacaacagtaataactaccag
gtggccagccagctgaagacctcaaccttgcccttaacctcgctcggaaggaagacgaca
gatgccaagggaagccctgtgagctctgccggcaaaggaaagaacaaggcagggctgttc
ggcagctgcgtcagtctgtcctctaacacgctgaccgaagagcacctgcctggctgtgca
cggcctaatgacatcagtagaaaaatgaagaaatcctacagcataaagcacattgctgag
ccagagccagaagaactcttcttgtaa

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