Oryctolagus cuniculus (rabbit): 100349566
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Entry
100349566 CDS
T03373
Name
(RefSeq) synphilin-1 isoform X1
KO
K04558
synphilin-1
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu05012
Parkinson disease
ocu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05012 Parkinson disease
100349566
05022 Pathways of neurodegeneration - multiple diseases
100349566
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Ortholog
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GFIT
Motif
Pfam:
SNCAIP_SNCA_bd
Ank_2
Ank_4
Ank
Ank_5
Ank_3
Motif
Other DBs
NCBI-GeneID:
100349566
NCBI-ProteinID:
XP_051700087
Ensembl:
ENSOCUG00000008627
LinkDB
All DBs
Position
3:6532817..6698551
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AA seq
968 aa
AA seq
DB search
MEAPEYLDLDEIDFSDDISYSVTSLKTIPELCRRCDSQNEDRSVSGSGWNCGVSTLITNT
QKPTGIADVYSKFRPVKRVSPLKHQPETLDSNESDDQKNQKGDLQKGGDSDAGPQPEELG
PEEGVGGLPGKGSEPSPALGELEHYDLDMDEILDVPYIKSNQQLASFSKVASDKRILGLC
TTINGLATGKACCAGGAENPPPTTTPFCVLSPVKSPHLRKASTAIRDQHKLGPEESESAP
ALVSCVSAYEPETQSRDFPNKAFAEPHGGKAEKALPDCQLRAFRLPCSAAEATLEEQVNG
VSWPTCQGPEEKTEHQKKVKSILNIVREGQISLLPHLAADNLDKIHDENGNNLLHIAASQ
GHAECLQHLTSLMGEDGLNERNAGKLTPAGLAIKNGQLECVRWMVSETEAIAELSCSRDF
PSLIHYAGCYGQEKILLWLLQFMQEQGISLDEVDQDGNSAVHVASQHGFLGCIQTLVEYG
ANVTMQNHAGEKPSQSAERHGHTLCSRYLVVVETCMSLASQVVKLTKQLKEQTVERVTLQ
TQLQQLLEAQKTEGKSLPSSPSSPSSPASKTAQWKAPDTDEESAARTKPGIQEGIQVLGS
LSAASRARAKAKDEDSDKILRQLLGKEISENVCTQEKLSLEFQDAQTSRNPKKIPAEKRE
LKLARLRQLMQRSLSESDTDPTNPEDPKSTPVRKSDRPRPQPIVESVEGAEGTESLHLMI
KKHSLASGRRFPFGIKASRSLDGHSPSPTSESCEADLESQYPGPGSAPPSQAPGDPTQPS
PDSPAAQKVATSPKSALKSPSSKRRTSQNLKLRVTFEEPVVQMEQTSPDPSGERDKDRGR
TLPRTSPGSESGDQLKRPFGTFRSIMETLSGNQNNSNNYQVASQLKTSTLPLTSLGRKTT
DAKGSPVSSAGKGKNKAGLFGSCVSLSSNTLTEEHLPGCARPNDISRKMKKSYSIKHIAE
PEPEELFL
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggaagcccctgaataccttgatttggatgaaatagacttcagcgatgacatatcttat
tcagtcacgtcgctcaagaccatcccagaactgtgccgaagatgcgattcacaaaacgaa
gacagatcagtttccggctctggctggaattgtggcgtctcaactcttattaccaacaca
cagaagcccaccgggatcgccgatgtatatagcaagttccgcccggtgaaacgggtttcc
ccactgaaacaccagccggagaccctggacagcaatgaaagcgatgatcaaaagaaccag
aagggggacctccagaaagggggtgattctgatgcaggcccccagcctgaggagctgggc
cccgaagagggagtcgggggcctgcctgggaagggctcggagcccagcccggcgctgggc
gagctggagcactatgacctcgacatggatgagatcctggatgtgccttacatcaagtcc
aaccaacagcttgcctctttcagcaaggtggcttcagacaaaaggattttgggtttatgc
acgaccatcaacggcctcgccaccggcaaagcctgctgtgcaggaggtgccgagaaccca
ccacccaccacaacgcccttctgtgtcctgtctcccgtgaaaagccctcacctgagaaaa
gcatccactgccatccgcgatcagcacaagctgggcccggaagaatctgagagcgcgccc
gctctggtttcttgtgtctctgcgtatgagcctgagacccagagcagagacttcccaaac
aaggccttcgcagaaccacatggcggaaaggccgagaaggcactgcccgactgccagctc
cgggccttccgcctgccgtgctcggccgcagaagccacgctggaggagcaggtcaacggc
gtgagctggcccacttgccagggccccgaggagaagactgagcaccagaagaaagtcaag
agcatcctgaacattgtcagagaagggcagatctcgctcctgccacacctcgccgcagac
aacctggacaagattcacgacgagaacgggaacaacctgctgcacatcgccgcctcgcag
ggccacgccgagtgcctgcagcacctcacctccctcatgggggaagacggcctcaatgag
cgcaacgcgggcaagctgacccccgcgggcctggccatcaagaacggccagctggagtgt
gtgcgctggatggtgagtgagacggaagccatcgcagagctgagttgttccagggacttc
cccagcctcatccattacgcgggctgctatggccaggaaaagattctgctctggctcctc
cagtttatgcaagagcagggcatctcactggacgaagtggaccaggacggcaacagtgct
gttcacgtggcctcgcagcacggcttcctgggctgcatacagaccctggtggaatacgga
gcaaacgtcaccatgcagaaccatgcgggggagaagccatcccagagcgccgagcggcat
ggccacaccctgtgctcccggtacctggtggtggtcgagacctgcatgtcactggcctca
caagtggtgaagctgaccaagcagctcaaggaacagacggtggagcgcgtcaccctccag
acccagctccagcagcttctggaagcccagaagacagagggcaagtcactcccctcctcg
cccagctcgccatcctcaccggcttccaaaacagcacagtggaaggccccagacacagat
gaggagtccgcggccaggaccaagccggggatccaagaagggattcaggtgctcggcagc
ctgtccgcggccagccgcgccagggccaaagccaaagacgaagattctgataaaatcctg
cgtcagttactggggaaagaaatctcagaaaatgtctgcacccaagagaagctgtccttg
gaattccaggatgctcagacttctagaaatccaaagaagatcccggcggagaagagggag
ctgaagttggccaggctgagacagctgatgcagaggtctctgagtgagtccgacacagac
cccaccaaccctgaggaccccaaaagcaccccagtgaggaagtccgacaggcccaggcca
cagcccatcgtggagagcgtggaaggcgcggagggcaccgagagcttgcacctgatgata
aagaaacacagcttggcctcgggacgcaggtttccttttggtatcaaggcctccagatcc
ctggatggccacagcccttctcccacctcagagagctgcgaagcggacctggaatcccag
tacccaggccccgggagcgctcctccaagccaggcccctggagaccccactcagcccagc
cccgacagccctgcagcccagaaagtggccaccagtcccaagagcgccctcaagtctcca
tcttccaagcgccggacatctcagaacttgaaactcagagtgacttttgaggagcccgtg
gtgcagatggagcaaacaagccctgacccaagtggggagagagacaaagacaggggcagg
accctccctcggacctccccggggagcgagtccggggatcagctgaaaaggccttttggg
accttccggtccatcatggagacactaagtggcaaccagaacaacagtaataactaccag
gtggccagccagctgaagacctcaaccttgcccttaacctcgctcggaaggaagacgaca
gatgccaagggaagccctgtgagctctgccggcaaaggaaagaacaaggcagggctgttc
ggcagctgcgtcagtctgtcctctaacacgctgaccgaagagcacctgcctggctgtgca
cggcctaatgacatcagtagaaaaatgaagaaatcctacagcataaagcacattgctgag
ccagagccagaagaactcttcttgtaa
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