Oryctolagus cuniculus (rabbit): 100349581
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Entry
100349581 CDS
T03373
Name
(RefSeq) mRNA-decapping enzyme 1A
KO
K12610
mRNA-decapping enzyme 1A [EC:3.-.-.-]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100349581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100349581
03036 Chromosome and associated proteins [BR:
ocu03036
]
100349581
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100349581
mRNA degradation factors
5'-3' decay
Decapping complex
100349581
Chromosome and associated proteins [BR:
ocu03036
]
Eukaryotic type
Gene silencing
piRNA pathway
100349581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
100349581
NCBI-ProteinID:
XP_002713436
Ensembl:
ENSOCUG00000011971
LinkDB
All DBs
Position
9:95818738..95884279
Genome browser
AA seq
602 aa
AA seq
DB search
MALSCPRLRPHRRGSAPGFKMESLSRAGQEMSLAALKQHDPYITSIADLTGQVALYTFCP
KANQWEKTDIEGTLFVYRRSASPYHGFTIVNRLNMHNLVEPVNKDLEFQLHEPFLLYRNA
SLSIYSIWFYDKNDCHRIAKLMADVVEEETRRSQQAARDKQSPNQANGCSDHRPIDILEM
LSRAKDEYERNQMGDSNISSPGLQPSTHLSNLGSTETLEDTPSGSQDKSAPSGHKHLTVE
ELFGTSLPKEQPAVMGLDSEEVEKLPGEASQKEPSSFLPFPFEQAGGGLPSENPGVHSAA
HHSVQPEVPTPVLITPASITHSSEKHAPSYTIPLSPVLSPTLPGDAPAAQVPPSLSRNST
MMQAVKTTPRQRSPLLNQPVSELSHSSLIASQSPFRAPLSVTNPAGASLPSVDLLHKLRL
TPQHDQIQTQTLGKGAVAPTLCPAAGQLATPESFIEPPSKTAAARAAASASLSNMVLAPL
QSMQQNQDPEVFAQPKMLSSAIPVAGPPLVTATTTAVSSVLLSPSAFQQTIPRSVELERK
ASSPSPLTVGAAENTRKPSIVLSRAQLQDTLIHLIKNDSGFLSTLHEVYLQVLTKNKENH
TL
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggcactttcctgtccgcgactccgcccccaccggaggggctcggctccaggattcaag
atggagtcgctgagtcgagctgggcaggagatgagtctggcggccctgaagcagcacgac
ccctacatcaccagcatcgcagacctcacgggccaggtcgctctgtacaccttctgtccc
aaggctaaccagtgggagaagactgatatagaagggaccttatttgtataccgaaggtca
gcttcaccttaccatggttttaccattgtgaatcgactgaatatgcacaatctagttgaa
ccagtgaacaaagatctggaatttcagctccatgaaccatttcttttgtatagaaatgca
agcttgtcaatatacagtatctggttttatgacaagaatgactgtcaccgcatagcaaaa
ctcatggctgacgtggtagaagaggaaacaaggcgatcgcaacaagctgctcgggataaa
cagagtccaaaccaggccaatggctgcagcgaccaccggcccatcgacatcctggagatg
ctgagcagagccaaggatgagtacgagaggaatcagatgggtgactccaatatctccagc
cctggattacagccaagtactcacctctccaacctgggaagcactgagactctggaagac
acaccctccgggtcacaagataagtctgctccgtctggacacaaacatctgacggtagaa
gagctattcggaacctctttgccaaaggaacagcccgcagtcatgggtctggattcagaa
gaagtggagaagctgccgggagaggcctcccagaaagaacccagctccttccttccattc
ccctttgagcaagcaggaggaggccttccatcagaaaacccgggtgtccattctgctgcc
caccactcagtccagccagaagtccccaccccggtgctaatcaccccagcctccatcaca
cactccagtgaaaagcatgccccaagctacacaatcccattgagccccgttctcagcccc
actctgccaggtgacgcccctgctgcgcaggttccccccagcctgtctcgaaacagcact
atgatgcaagcagtgaagaccacgcctagacagaggtctccactgctgaaccagcctgtc
tctgagctaagccacagcagtctgattgccagccagagtcccttcagagccccactgagc
gtgacaaacccagctggagcatccctcccaagcgttgatcttctgcataaactcaggttg
actccacagcatgaccaaatacagacgcagacacttgggaaaggagcagtggcacccacc
ctgtgcccagcagctggccagctggccacacctgagagcttcatcgagcctccctctaag
accgcggcagcgagagcagcagcctcagcctccttgagcaacatggtgcttgctcccctt
cagtctatgcagcaaaaccaggatcctgaagtatttgcccagcctaagatgttatccagt
gccatcccggttgctggccccccactggttaccgcaacaaccacagcagtatcgtcagtc
ctgctgtccccaagtgctttccagcaaacgattccaaggtccgtagagcttgagaggaaa
gcaagctccccttctcctctcaccgtcggagcagcagaaaacacgaggaagccgtccatt
gttctcagcagggctcagctccaggatacactaattcatctgatcaagaatgattccggc
ttcctcagtacacttcatgaggtctacttgcaggttctgaccaagaacaaggagaaccac
accctatga
DBGET
integrated database retrieval system