KEGG   Oryctolagus cuniculus (rabbit): 100349593
Entry
100349593         CDS       T03373                                 
Name
(RefSeq) tripartite motif-containing protein 42 isoform X2
  KO
K12018  tripartite motif-containing protein 42
Organism
ocu  Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ocu01009]
    100349593
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ocu04121]
    100349593
Protein phosphatases and associated proteins [BR:ocu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     100349593
Ubiquitin system [BR:ocu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    100349593
SSDB
Motif
Pfam: fn3 zf-B_box Pur_ac_phosph_N Ig_DSCAM-DSCAML_C NUC
Other DBs
NCBI-GeneID: 100349593
NCBI-ProteinID: XP_002716607
Ensembl: ENSOCUG00000005488
UniProt: G1SP08
LinkDB
Position
14:35371974..35396208
AA seq 723 aa
METAMCVCSPCCTWQRCCPQLCSCLCCKFIFTSERNCTCFPCPYKDERNCQFCHCTCSDN
PNCHWCCCSWANDPNCKCCCTTSSNLKCYYYESRCCRNATITFRKGRLKSIRTSSKTALR
IGSSDTQVDDLKSMPANSHLVDHLTCPMCNRLRLHSFMLPCNHSLCEKCLRQLQKHAEVT
ENFFILICPVCNRSHCMPYSNKMQLPENYLRGRLTKRYMQQHGYLKWRFDRSSGPILCQV
CRKRRIAYKRCITCRLNLCNECLKAFHSDVAMQDHVFVDTSPEDQDEKVCIHHPSSRINE
YCRNDNELLCTFCKIAFHSGHDTVGLIDACSERAAALFSAIAKFKAVRYEIDNDLMEFNI
LKNSFKADKEAKRKEIRSGFLKLRSILQEKEKSIMEQIENLEVSRQKEIEKYVHVTTLKV
NEMDGLIAYSKEALKETGQVAFLQSAKILVDQIEDGIQSTYRPDPHLRLHSMHCMPLDFA
ELSSAIHELFPTGPKKVCSSGDSLPAPYPMHSEMMIARKVTFSTHSFGNQQIYQRSSSLL
SFSAAGEKAKGGLEAYGRTQSAAPAKPPDGLYTYWSATADSQPAQNCNSFHNWYSFNDTS
VKTPGPIVIYQTLVYPRAAKVYWTCPTEDVDSFEMEFYELVTTPPNNVRTELCGQIRDIM
QQNLELHNLTPNTEYLFKVRAINDNGPGQWSDVCKVVTPDGRGKNRAKWGLLKNIQSALQ
KRF
NT seq 2172 nt   +upstreamnt  +downstreamnt
atggagactgctatgtgcgtttgctcgccatgttgtacatggcaaagatgttgtcctcag
ctatgctcctgtctgtgctgcaagttcatcttcacctcggagaggaactgcacttgcttc
ccctgcccatacaaggatgagcggaactgccagttctgccactgcacctgctccgataac
cccaactgccactggtgctgctgctcctgggccaatgatcccaactgcaaatgctgctgc
acgaccagcagcaatctcaagtgctactactatgagagccgctgctgtcgcaatgccacc
atcaccttccgcaagggccgtctcaagagcatccgcacctcctccaagaccgccctgcgc
atcgggagcagcgacacccaggtggatgacctgaagtcgatgccagccaacagccacctg
gtggaccatctcacctgccccatgtgcaaccggctgcgcctgcactccttcatgctgccc
tgcaaccacagcctgtgcgagaagtgcctgcggcagctgcagaagcacgccgaggtgacg
gagaacttcttcatcctcatctgtccggtgtgcaaccgctcgcactgcatgccctacagc
aacaaaatgcaactgcccgagaactacctgcgcggccgcctcaccaagcgctacatgcag
cagcacggctacctcaagtggcgcttcgaccgctcctccgggcccatcctctgccaggtc
tgccgcaaacggcgcatcgcctacaagcgctgcatcacctgtcgcctcaacctgtgcaac
gaatgcctcaaggccttccactcggacgtggccatgcaggaccacgtcttcgtggacacc
agccccgaggaccaggacgagaaggtctgcatccaccacccgtccagccgcatcaacgag
tactgccgcaacgacaatgagctactctgcaccttctgcaagatcgccttccacagcggc
catgacaccgtcggcctcatcgacgcctgctcggagagggcggccgcgctcttcagcgcc
atcgccaagttcaaagcagtccggtatgaaattgataatgacctcatggagttcaacatt
ctgaaaaacagttttaaagcggataaggaggcaaagcggaaagagatcagaagcgggttt
ctgaagctgcgcagcattctgcaggagaaagagaagagcatcatggagcagatcgagaat
ctagaggtgtccaggcagaaggagatcgagaagtacgtccacgtcaccaccctgaaggtg
aacgagatggatggcctgatagcctactccaaggaagccctgaaggagacgggccaagtg
gccttcttacagtcggccaagatcctggtggaccagatcgaggatggcatccagagcacc
taccggcccgacccgcacctgcggctgcactccatgcactgcatgcccttggacttcgcc
gagctctccagcgccattcacgagctcttccccacgggacccaagaaggtgtgttcctcc
ggagactcactgcccgccccctaccccatgcactcggagatgatgatcgccaggaaggtc
acgttcagcacccacagcttcggcaaccaacagatataccagcggagctcctccttgctg
tccttcagcgccgctggtgagaaggccaaggggggtctggaggcctacgggaggacccag
tctgccgcgcccgccaagccccccgacgggctgtacacctactggagtgccacagccgac
agccagcctgcacagaactgcaacagcttccacaactggtactcgttcaacgacacctct
gtgaaaaccccaggcccaattgttatctaccagactctggtgtatccaagagccgctaag
gtttactggacgtgccccacagaagacgtggactctttcgagatggaattctacgaactc
gttacgaccccgcctaacaacgtgcgcacagagctctgtggacagattcgtgacataatg
cagcagaacctcgaactgcacaacctgacccccaacaccgagtacctgttcaaagtgaga
gccatcaatgacaatgggcccgggcagtggagcgacgtgtgcaaggtggtaacaccagat
gggcgggggaagaaccgagctaagtggggcctgctgaagaatatccagtctgctctccag
aagcgcttctga

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