Oryctolagus cuniculus (rabbit): 100349625
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Entry
100349625 CDS
T03373
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG9
KO
K18735
protein SMG9
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100349625
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
100349625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
AAA_30
DUF6079
Motif
Other DBs
NCBI-GeneID:
100349625
NCBI-ProteinID:
XP_002723146
Ensembl:
ENSOCUG00000002786
UniProt:
G1SIB3
LinkDB
All DBs
Position
Unknown
AA seq
520 aa
AA seq
DB search
MSESGHSQPGLYGIERRRRWKEPGPGGPQSLSGPGGREREYVAPWERERRDGSEEPSGSV
MQKTPIILSKPPAERSKQPPPPAAPAAPPAPAPLEKPIVLMKPREEGKGPAAGAGASTPE
GAAPPPPAAPAPPKGEKEGQRPTQPVYQIQNRGMGPAAPAAMDPVVGQAKLLPPERMKHS
IKLVDDQMNWCDSAIEYLLDQTDVLVVGVLGLQGTGKSMVMSLLSANTPEEDQRAYVFRA
QSAEMKERGGNQTSGIDFFITQERIVFLDTQPILSPSILDHLINNDRKLPPEYNLPHTYV
EMQSLQIAAFLFTVCHVVIVVQDWFTDLSLYRFLQTAEMVKPSTPSPSHESSSSSGSEEG
TEYYPHLVFLQNKARREDFCPRRLRQMHLVIDQLMAHSHLRYKGTLSMLQCNVFPGLPPD
FLDSEVNLFLVPFMDSEAESETPPRAGPGSSPLFSLLPGYRGHPSFQSLVSKLRSQVMSM
ARPQLSHTILTEKNWFHYAARIWDGVKKSSALAEYSRLLA
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagtccggccacagtcagcccgggctctacggcatagagcgccggcgccggtgg
aaggagccgggccccggcggcccccagagcctctctgggcctggaggccgggagcgggag
tacgtcgccccgtgggagcgcgagaggcgggacggcagcgaggagccgagcggctcggtc
atgcagaagacgcccatcatcctgtccaaaccgcccgcggagcggtccaagcagccgccg
cccccggccgctcccgccgcgccgcctgcacccgcgcctctggagaagcccatcgtcctc
atgaagccgcgcgaggaggggaaggggccggcggccggggccggggcctccacccctgag
ggggccgcgccgccacccccggcggcccccgcgcctcccaagggggagaaggagggccag
aggcccacacagcccgtgtaccagatccagaaccggggcatgggccccgccgccccggca
gccatggaccccgtggtgggccaggccaagctgctgcccccggagcgcatgaagcacagc
atcaagctggtggatgaccagatgaactggtgcgacagcgccatcgagtacctgttggat
cagaccgacgtgttggtggttggtgtcttgggcctccagggcacaggcaagtccatggtc
atgtcgttgctgtcggccaacactccagaggaggaccagagggcgtacgtgttccgggcc
cagagcgccgagatgaaggagcgcgggggcaaccagacgagcggcatcgacttcttcatc
acccaggagcggattgtgttcctggacacacagcccatcctcagcccctccatcttggac
cacctcatcaataacgaccgcaagctgcctccggagtacaaccttccgcacacctacgtg
gagatgcagtccctgcagattgccgccttcctcttcacggtctgccacgtggtgatcgtg
gtccaggactggttcacagacctgagtctgtacaggttcctgcagaccgcggagatggtg
aagccctccacgccgtcccccagccacgagtccagcagctcatcgggctccgaggagggc
accgagtactacccccacctggtcttcctgcagaacaaggcccgccgggaggacttctgt
ccccgcaggctgcggcagatgcacctggtgatcgaccagctcatggcccactcgcacctg
cgctacaaggggaccctgtccatgctgcagtgcaacgtcttcccggggctgccgcctgac
ttcctggactcggaggtcaacttgttcctggtgcccttcatggacagcgaagcggagagc
gagaccccgcccagagcagggccgggttccagcccactcttctccctgctgcccgggtac
cgcggccaccccagcttccagtccttggtgagcaagctccggagccaggtgatgtccatg
gcccggccgcagctgtcccacacgatcctcaccgagaagaactggttccactatgctgcc
cggatctgggacggggtgaaaaagtcctcggccctggcagagtacagccgcctgctggcc
tga
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