KEGG   Oryctolagus cuniculus (rabbit): 100349698
Entry
100349698         CDS       T03373                                 
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03022  Basal transcription factors
ocu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    100349698
  09124 Replication and repair
   03420 Nucleotide excision repair
    100349698
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ocu03021]
    100349698
   03400 DNA repair and recombination proteins [BR:ocu03400]
    100349698
Transcription machinery [BR:ocu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     100349698
DNA repair and recombination proteins [BR:ocu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     100349698
SSDB
Motif
Pfam: MAT1 zf-C3HC4_5 zf-RING_5 zf-C3HC4 zf-RING_UBOX zf-UDP zf-RING_2 zf-C3HC4_2 TRAF3_RING DZR_2 DNA_ligase_ZBD LMBR1 Zn_ribbon_6 zf-P11 zf-RING_4 DUF1272 DUF763
Other DBs
NCBI-GeneID: 100349698
NCBI-ProteinID: XP_002719592
Ensembl: ENSOCUG00000014274
UniProt: G1T724
LinkDB
Position
20:8015209..8240306
AA seq 309 aa
MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKSNFRV
QLFEDPTVDKEVEIRKKVLKIYNKREEDFPSLREYNDFLEEVEEIVFNLTNNVDLDNTKK
KMEKYQKENKDVIQKNKLKLTREQEELEEALEVERQENEQRRLFIQKEEQLQQILKRKNK
QAFLDELESSDLPVALLLAQHKDRSTQLEMQLEKPKPVKPVTFSTGIKMGQHISLAPVHK
LEEALYEYQPLQIETCGPQVPELEMLGRLGYLTHVRAASPQDLAGGYTSSLACHRALQDA
FSGLFWQPS
NT seq 930 nt   +upstreamnt  +downstreamnt
atggatgatcagggatgcccccggtgtaagaccaccaagtaccggaacccctccttaaag
ctgatggtgaatgtgtgcggccacactctgtgtgaaagttgtgtggatttactgtttgtg
agaggagctggaaattgtcctgaatgtggtactccactcagaaagagcaacttcagggtg
caactctttgaagatcccactgttgacaaggaggttgagattcggaaaaaggtgctgaag
atatacaataaaagggaagaagactttcctagtctaagagaatacaatgatttcctcgaa
gaagtagaagaaattgtattcaacttgaccaacaatgtggatttggacaacaccaaaaag
aaaatggagaaataccaaaaagaaaacaaagatgttattcagaaaaataaattaaaactg
actcgggaacaggaagaactggaagaagctttagaggtagaacgacaggaaaatgaacaa
agaagactgtttatacaaaaagaagaacagctgcagcagattctaaaaaggaagaataag
caagcttttcttgatgaactggagagttctgatctccccgttgctctgcttttggctcag
cataaagatagatctacccagttggaaatgcaacttgagaaacctaagcctgtaaaacca
gtgacattttccacgggcatcaagatgggtcagcatatttcattggcacctgttcacaag
cttgaagaagctctctatgaataccagcccctgcagatagagacttgtggaccacaggtt
cctgagcttgagatgctgggaagacttgggtatttaacccacgtccgagctgcctctcca
caggacctcgctggcggctatacttcgtcccttgcttgtcacagagccctacaggacgca
ttcagcgggcttttctggcagcccagttaa

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