Oryctolagus cuniculus (rabbit): 100349698
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Entry
100349698 CDS
T03373
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03022
Basal transcription factors
ocu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100349698
09124 Replication and repair
03420 Nucleotide excision repair
100349698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocu03021
]
100349698
03400 DNA repair and recombination proteins [BR:
ocu03400
]
100349698
Transcription machinery [BR:
ocu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
100349698
DNA repair and recombination proteins [BR:
ocu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
100349698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-C3HC4
zf-RING_UBOX
zf-UDP
zf-RING_2
zf-C3HC4_2
TRAF3_RING
DZR_2
DNA_ligase_ZBD
LMBR1
Zn_ribbon_6
zf-P11
zf-RING_4
DUF1272
DUF763
Motif
Other DBs
NCBI-GeneID:
100349698
NCBI-ProteinID:
XP_002719592
Ensembl:
ENSOCUG00000014274
UniProt:
G1T724
LinkDB
All DBs
Position
20:8015209..8240306
Genome browser
AA seq
309 aa
AA seq
DB search
MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKSNFRV
QLFEDPTVDKEVEIRKKVLKIYNKREEDFPSLREYNDFLEEVEEIVFNLTNNVDLDNTKK
KMEKYQKENKDVIQKNKLKLTREQEELEEALEVERQENEQRRLFIQKEEQLQQILKRKNK
QAFLDELESSDLPVALLLAQHKDRSTQLEMQLEKPKPVKPVTFSTGIKMGQHISLAPVHK
LEEALYEYQPLQIETCGPQVPELEMLGRLGYLTHVRAASPQDLAGGYTSSLACHRALQDA
FSGLFWQPS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcagggatgcccccggtgtaagaccaccaagtaccggaacccctccttaaag
ctgatggtgaatgtgtgcggccacactctgtgtgaaagttgtgtggatttactgtttgtg
agaggagctggaaattgtcctgaatgtggtactccactcagaaagagcaacttcagggtg
caactctttgaagatcccactgttgacaaggaggttgagattcggaaaaaggtgctgaag
atatacaataaaagggaagaagactttcctagtctaagagaatacaatgatttcctcgaa
gaagtagaagaaattgtattcaacttgaccaacaatgtggatttggacaacaccaaaaag
aaaatggagaaataccaaaaagaaaacaaagatgttattcagaaaaataaattaaaactg
actcgggaacaggaagaactggaagaagctttagaggtagaacgacaggaaaatgaacaa
agaagactgtttatacaaaaagaagaacagctgcagcagattctaaaaaggaagaataag
caagcttttcttgatgaactggagagttctgatctccccgttgctctgcttttggctcag
cataaagatagatctacccagttggaaatgcaacttgagaaacctaagcctgtaaaacca
gtgacattttccacgggcatcaagatgggtcagcatatttcattggcacctgttcacaag
cttgaagaagctctctatgaataccagcccctgcagatagagacttgtggaccacaggtt
cctgagcttgagatgctgggaagacttgggtatttaacccacgtccgagctgcctctcca
caggacctcgctggcggctatacttcgtcccttgcttgtcacagagccctacaggacgca
ttcagcgggcttttctggcagcccagttaa
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