Oryctolagus cuniculus (rabbit): 100349709
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Entry
100349709 CDS
T03373
Name
(RefSeq) sodium channel protein type 11 subunit alpha isoform X1
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocu04040
]
100349709
Ion channels [BR:
ocu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
100349709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
100349709
NCBI-ProteinID:
XP_051691510
Ensembl:
ENSOCUG00000001376
LinkDB
All DBs
Position
Unknown
AA seq
1769 aa
AA seq
DB search
MKMDDRCYPVIFPDAQNFRPFTSDSLAAIEKRLIIQKEQSKSRDKTGGAGGEPQPRPQLD
LKASRKLPKLYGNIPPELIGKPLEDLDPFYRNHKTFMVLNKKRTIYRFSAKRALFIFGPF
SSIRSLAIRISVHSVFSMLIISTVVINCVFMARGRVKDSNSTVPDTAEYVFTGIYIFEAL
IKILARGFILDEFSFLRDPWNWLDSIVIGTAIVSYFPNININLLSLRTFRVFRALKAISV
VSGLKVIVGALLRSVKKLVDVMILTLFCLSIFALVGQQLFMGSLSLKCVDNECVNHSHHL
ADKCFEKEENSKEFRMCGTWMQDRACSKNYTCRLTKFNPDYNYTNFDNFGWSFLAMFRLM
TQDSWEKLYQQTLRTAGLYSVFFFVVVIFLGSFYLINLTLAVVTMAYEEQNRNVAAETEA
KEKMFQEAQRLLKEEKENLVAMGIDRSSLNSLEASSFSSKKRKLFGSKKRKSFFMREPKN
DQAPGSDSDDDSSQKPHLLEQTKRLSQNLSVDHFDEHGDPLQRQRALSAVSILTITMHEQ
EKAQEPCLPCGKNLASKYLVWNCCPLWVCIKKALRAVVTDPFTELAVTLCIIVNTVFLAL
EHHNMDKDFKAILSTGNLVFTAIFIAEMCLKIMALDPYYYFRQRWNIFDCVVALLSLVDV
IYVRHNLPYLRPLRVLRVFKLAKSWPTLNTLIKIIGHSVGAFGNLTVVLAIVVFIFSVVG
MQLFGSKFCSVKSRKLCNPGESCARRWHMGDFYHSFLVVFRILCGEWIENMWECMQEMDT
EAPLCVIIFVLIMVIGKLVVLNLFIALLLNSFSSEERGGSAEEETRKTKVQLALDRVRKA
FARLVLLAGRFCRKRCGKRSSRKQTEGPAGRDLIALASGKRGGPEPREAVGAPASGPRLL
SIGHGRAWLAPLAEEDDATSLGEDDPAAATQQACEPHQETEKPSSPGVESLEVDVFPEDV
CLTSQTPQKKADSSSVLSECSTIDLQEAFRWLAETAPRKQPDRCLPKGLSSCCPCCSVDK
RKSPWATWWNLRKTCYQIVKHSWFESFIIFVILLSSGTLVFEDVYLKRQPNIERLLNCTD
NIFTFIFILEMGLKWVAFGFRKYFTSAWCWLDFVIVIVSVISLINLKSLKSFRTLRALRP
LRALSQFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFCIVGVNFFSGKFGKCINKTDPN
LFTNHTIITYRNQCQTDNFSWVNPEVNFDNVGQAYLALLQVATYKGWMEIMYAAVDSRDK
DVQPVFEANSCMYIYFIIFIIFGSFFSLNLFIGVIIDNFNQQQRKISGQDIFMTEEQKKY
YNAMKKLGTKKPQKPIPRPLNKCQGLVFDLVTSQVFDIIIILLIVLNMVSMMMETTEQSR
AMTAVLDYLNVAFVVIFTAECLVKVFALRQYYFTNGWNLFDGVVVVLSIVSTMVSALENQ
KHIPFPPTLFRIVRLARIGRVLRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLVMFIYA
ILGMNCFSDVSPQPGVDDIFNFRTFVRSMLCLFQITTSAGWDSLLSPMLKAENASRNRYL
PAIAIAYFVSYIIISFLIVVNMYIAVILENFNTATEESEDPLGEDDFEIFYEVWEKFDPE
ATQFIAYSALSDFADALPEPLRVAKPNKFQFLVMDLPMVSGDRLHCLDILFAFTTRVLGD
SSCPDSMKAMMEEKFMEANPFKKLYEPIVTTTKRKEEERGAAVIQKAFRKYLTKMTKCPL
EDRPPPPLQMLCNGDLPSAEVAKGKAHYD
NT seq
5310 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggacgacaggtgctaccccgtgatcttcccagacgcgcagaatttccgcccc
ttcacttctgattctctggctgccattgagaagcggctcatcatccaaaaggagcaaagt
aaatccagagacaagacagggggtgcaggaggtgagccccaaccccggcctcagcttgac
ctgaaggcctccaggaagctgcctaagctctatggcaacattccccctgagctgataggg
aagccgctggaagacttggacccgttctacagaaatcataagacatttatggtgttgaac
aaaaagagaaccatctaccgctttagtgccaagcgggcactgttcatcttcgggcctttc
agttccatcagaagcttagccattagaatctcagtacattcggtgttcagcatgctcatc
atcagcaccgtggtcatcaactgcgtgttcatggcgagaggtcgcgtgaaggacagcaac
agcacagtgcccgacaccgccgaatacgtcttcaccgggatttacatttttgaagctttg
ataaaaatactggcaagaggttttattctggatgaattttctttccttcgagatccatgg
aactggttggactccatcgtcattggaacagcgattgtgtcctatttcccaaacatcaac
atcaatctgttgtccctgcgaaccttccgagtgttcagagctttgaaagccatttctgtg
gtttcagggctcaaggtcattgtgggggccttgctgcgctccgtgaagaagctggtggac
gtgatgatcctcaccctgttctgcctcagcatctttgcgctggtgggccagcagctcttc
atgggaagcctgagcctcaagtgtgtcgacaacgagtgcgtgaaccacagtcatcacctg
gcagacaaatgctttgagaaagaagaaaactctaaagaattcagaatgtgcggcacctgg
atgcaggacagagcctgttccaaaaattacacatgccgcctcaccaaatttaatcccgac
tacaattacacgaattttgacaactttggctggtcttttcttgccatgttccggcttatg
actcaggattcctgggagaaactttatcagcagacgctgcgcactgctgggctctactcc
gtcttcttcttcgtggtggtcatcttcctgggctccttctacctgattaacctgaccctg
gctgtggtcaccatggcctacgaggagcagaacaggaacgtcgccgcggagaccgaggcc
aaggagaagatgtttcaggaagcccagaggctgctaaaggaggagaaggagaatctggtt
gccatgggaattgacagaagttcactgaattcccttgaagcctcatctttctcctcaaag
aagagaaagctttttggtagtaagaaaaggaagtctttcttcatgagagagccaaagaat
gaccaggctccgggatcagactctgatgacgactcctcccagaagccacatctcctggag
cagaccaagcgcctgtcccagaacctgtccgtggaccacttcgatgagcacggagacccc
ctccaaaggcagagggccctgagcgctgtcagcatcctcaccatcaccatgcacgaacag
gaaaaagcccaggagccttgcctcccctgcgggaaaaacctggcttccaagtacctggtg
tggaactgctgcccgctgtgggtgtgcatcaagaaggccctgcgcgccgtggtgacggac
cccttcactgagctggccgtcaccctgtgcatcatcgtcaacaccgtcttcttggccctg
gagcatcataacatggacaaggacttcaaggccattttgagtacagggaatttggttttc
actgccattttcatagcagaaatgtgcctcaaaatcatggctcttgatccctactactac
ttccgtcagcgctggaacatcttcgactgcgtcgtcgctctcctgagcctggtggacgtg
atttacgtgaggcacaacctgccctacctgcgtcccctcagagtgctccgggtcttcaag
ttagccaagtcctggccgactctaaacacgctgattaagataattggacactctgtagga
gccttcggaaacctgacggtggtcctggccattgtggtcttcattttctctgtggttggc
atgcagctttttggctctaagttctgttctgtaaagagtaggaagctgtgtaaccctggc
gagtcctgtgcacgacgctggcacatgggggacttctaccactccttcctggtggtgttc
cgcatcctgtgtggggagtggatcgaaaacatgtgggagtgcatgcaggagatggacacc
gaggcgccgctgtgtgtgatcatctttgtgctgatcatggtgatagggaaacttgtggtg
ctcaacctcttcattgccttgctgctcaactccttcagcagtgaggagaggggcggaagc
gcggaagaagagaccaggaaaaccaaagtccagctggccctggaccgggtccgcaaggcc
ttcgcgcgcctggttctcctggccgggcgtttctgccgcaagcggtgcgggaagcgaagc
tcacggaagcaaacggaggggccggcaggcagagaccttatcgccctggcctcagggaag
agagggggccccgagccccgggaggccgttggtgccccggcctccggaccaaggctcttg
agtattggacacggtcgggcctggctggccccacttgcggaagaggacgacgccacctct
ctcggagaagatgatccggcggccgccacacagcaggcctgcgagccccatcaggagacc
gagaagccctccagccctggagtcgaaagcctggaagttgacgtgttccccgaagatgtt
tgtctgacttcacagactccccaaaagaaggctgacagcagcagtgtcctctcggagtgc
agcaccatcgacctccaggaggccttccggtggttggcagagacggctcccagaaagcag
ccggacaggtgcttgcccaaaggcctgagttcctgttgcccatgctgcagcgtggacaag
agaaagtccccctgggccacttggtggaacctgcgcaaaacctgctaccaaatagtaaaa
cacagctggtttgagagcttcattatctttgtgattctgctgagcagtgggacgctggta
tttgaagatgtttaccttaagcgccagcccaacattgaaagattgctcaattgtaccgac
aatattttcacatttatttttatcctggagatgggtctgaaatgggtggcctttggattc
aggaagtatttcaccagcgcctggtgctggctggatttcgtcattgtgattgtgtctgtg
atcagcctcatcaacctgaagtccttgaagtccttccggactctgcgagctctgaggcca
ctccgggcgctgtcgcagtttgaaggaatgaaggtggtggtgaacgctctcataggtgcc
atacctgccattctgaacgttttgcttgtctgcctcattttctggctcatattttgtatc
gtgggagtaaacttcttttctggaaagtttggaaaatgcattaataaaacagatccaaat
ttgtttacaaatcacaccatcattacatatagaaaccaatgccaaactgacaacttctct
tgggtcaacccagaagtcaactttgacaatgtggggcaagcttacctcgctctgctgcag
gtggcaacgtataagggctggatggagattatgtatgctgcggttgattcccgagataaa
gacgtacagccggtgttcgaggcgaattcgtgtatgtacatctacttcataatttttatc
atctttggctcattcttcagtctgaacctctttatcggtgttattattgacaacttcaac
caacagcagagaaagataagtggccaagacatctttatgaccgaagaacagaagaagtac
tataatgccatgaaaaaattaggaaccaaaaaaccccaaaagcccatcccaaggcctctg
aacaaatgtcaaggtctcgtgttcgacttagtcacaagccaagtgtttgacatcatcatc
atcctcctcatcgtcctgaacatggtcagcatgatgatggagacgaccgagcagtctcga
gccatgacggccgtcctggactacctcaacgtcgccttcgtggtcatcttcacggcagag
tgtctcgtcaaagtctttgctttgaggcagtactacttcaccaatggctggaacttattt
gatggtgtggtcgtggttctgtctattgtcagcacgatggtgtccgccctggagaaccag
aagcacattcctttccctccgacgctcttccggatcgtgcgcctggcccgcatcggccgc
gtcctgaggctggtgcgggcggcccggggcatcaggacgctgctcttcgcgctcatgatg
tcgctcccgtccctgttcaacatcgggctcctcctcttcctcgtcatgttcatctacgcc
atcctcggcatgaactgcttctctgacgtcagcccgcagcccggcgtcgacgacatcttc
aacttcaggaccttcgtgaggagcatgctctgcctcttccagatcaccacgtccgcgggc
tgggactccctgctcagccccatgctgaaggcggagaacgcctcccggaaccgctacctc
ccggccatagccatcgcctacttcgtcagctacatcatcatctccttcctcatcgtggtc
aacatgtacatcgccgtgatcctggagaacttcaacacggccacggaggagagtgaggac
cccctgggcgaggacgacttcgaaatattctacgaagtgtgggagaagtttgacccagaa
gcaacgcagttcatcgcctattctgccctttccgactttgccgatgccctgccggagcct
ctgcgggtggcaaagccgaacaaattccagtttctagtgatggacttgcccatggtgagc
ggggaccggctccactgcttggacattctctttgcattcaccaccagggtgctcggcgac
tccagctgcccggacagcatgaaagcaatgatggaggagaagttcatggaagcaaaccct
ttcaagaagctctacgagcccatcgtcaccaccaccaagaggaaggaggaggagcggggt
gccgcagtcatccagaaggcctttcgaaagtacctgaccaagatgaccaagtgccccttg
gaagacaggccccctcccccactccagatgctctgcaacggagacttgcccagcgccgag
gtcgccaagggcaaggcccactatgactga
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integrated database retrieval system
