KEGG   Oryctolagus cuniculus (rabbit): 100349788
Entry
100349788         CDS       T03373                                 
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like
  KO
K15544  RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100349788
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ocu03021]
    100349788
   03019 Messenger RNA biogenesis [BR:ocu03019]
    100349788
Enzymes [BR:ocu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     100349788
Transcription machinery [BR:ocu03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     100349788
Messenger RNA biogenesis [BR:ocu03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     100349788
SSDB
Motif
Pfam: Ssu72
Other DBs
NCBI-GeneID: 100349788
NCBI-ProteinID: XP_051683288
LinkDB
Position
X:complement(64595283..64596564)
AA seq 191 aa
MPLRVAVVCSSNQNRSMEAHNILSKRGFNVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQ
MYNDLLRKDKELYTQNGILHMLDRNRRIKPRPERFQSCKDLFDLILTCEERVYDQVVEDL
NSREQETCQPVHVVNVDIQDNPEEATLGAFLICELCQCIQHTEDMENEIEELLQEFEEKS
GRAFLHTVCFY
NT seq 576 nt   +upstreamnt  +downstreamnt
atgccactgcgggtggcagtggtgtgctccagtaaccagaaccggagcatggaagcgcac
aacatcctcagcaaacggggattcaacgtaaggtcctttggaacgggaactcatgtgaag
cttccaggaccagcgcccgacaagccaaacgtgtacgatttcaaaaccacttatgatcag
atgtacaatgatcttctgaggaaagacaaagaactctatacacagaatggcattttacat
atgttagacagaaataggaggatcaagccccgaccagaaaggttccagagctgcaaagat
ctatttgatctgatcctcacttgtgaagagagagtctacgaccaggtggtggaagacctg
aactccagagaacaggagacctgccagccagtgcacgtggttaacgtagacatccaggac
aaccccgaagaggcaactctgggagcgttcctcatctgtgagctttgtcagtgtattcag
cacaccgaggacatggagaacgagatcgaggagctgctccaggagttcgaggagaagagc
ggcagggccttcctgcacaccgtctgcttctattga

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