Oryctolagus cuniculus (rabbit): 100349797
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Entry
100349797 CDS
T03373
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM4 isoform X1
KO
K11998
tripartite motif-containing protein 4 [EC:
2.3.2.27
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocu04121
]
100349797
Enzymes [BR:
ocu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100349797
Ubiquitin system [BR:
ocu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100349797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
PRY
zf-C3HC4_3
zf-RING_2
RING_XB3-XBAT31
zf-RING_5
zf-RING_6
zf-Nse
HisK-N-like
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
100349797
NCBI-ProteinID:
XP_002721922
Ensembl:
ENSOCUG00000039179
UniProt:
A0A5F9DSL7
LinkDB
All DBs
Position
6:27788430..27865779
Genome browser
AA seq
475 aa
AA seq
DB search
MEAEDFQDELTCSICLDYFEDPVSIECGHNFCRRCLSRSWTPSGGCFLCPECRQPSAPGA
MRPNWALARMTEKRRRRHQGPAPQNLCSRHREPLRLFCEVDQRPVCLVCRESREHRAHAM
APIDEAFQNYREKLRSSECSLTVKMKTIVRLQETELKNATKWKEKIKNQQMRISTEFSKL
HHFLADEEQLILQRLREEEEETQKKMNENMLMLNQMITSMKKLILEVGEKSQASSLELLQ
NPKDVLIRCENQGDVNYSPEVLNVKTVCQIPMMKEMLKRFQVAVSLAEDTAHPKLIISQE
GRYVKNGAPASYRPVFSTAWSYFTGWRTPQNNTQFAERFQHLPCVLGKNVFTSGKHYWEV
ESKDSLEIAVGVCREDVMGITDNSELSPHMGIWVIYWNSDGYRPLTSLPIIPVKQESSLH
RVGVYLDHGAGNVSFYSAVDGVHLHTFSFPFVSRLRPFFWLSPLASLVIPVTDGK
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggaagccgaggacttccaagacgagctgacctgctccatctgcctggattattttgag
gacccagtgtccatcgagtgcgggcacaacttctgccgccgctgcctgagccgcagctgg
acgccgagtggcggctgcttcctctgtcccgagtgccggcagccgtcagcgcccggcgcg
atgcggccaaactgggccctggccaggatgacggaaaagaggcggcgccggcaccagggc
ccagcgcctcagaacctgtgcagccgccaccgggaaccgctgcggctcttctgcgaggtc
gaccagcggcctgtgtgcttggtctgcagggagtcccgggagcaccgggcccacgccatg
gctcccatcgacgaggcctttcagaactaccgggagaaacttcgtagttctgaatgtagt
cttacagtcaagatgaagacaattgtgcggttacaggaaacagaactgaagaatgctaca
aagtggaaggaaaagataaagaatcagcaaatgagaatcagcacggaattttcaaagcta
caccacttcctggctgatgaagagcaactgattcttcagaggctgagagaagaagaagaa
gaaacacagaagaaaatgaatgagaacatgttaatgctcaatcaaatgatcacttccatg
aagaagctcatcttagaagtgggagagaaaagccaggcctccagcctggaactgctccag
aatccaaaagatgtgctgatcaggtgtgaaaaccaaggagatgtgaactattcccctgaa
gttctaaatgtgaagactgtgtgccagataccaatgatgaaggaaatgctcaagagattc
caagtggctgtaagcctagctgaagacacagctcatcccaaacttatcatctcccaggaa
gggagatatgtgaaaaatggagcaccagccagttatcggccagtattttctacagcatgg
agctactttactggatggaggactcctcagaacaacacacaatttgcggagagatttcaa
cacttgccttgtgttctgggaaaaaacgttttcacttcagggaaacattactgggaagtg
gagagtaaagatagcctagagatagccgtgggagtgtgtcgggaagatgtcatggggatt
actgataattcagaattatccccccatatgggaatctgggtcatttactggaattcagat
ggctatcggcctctaacaagccttcctatcattcctgtcaaacaagaatcatctcttcac
cgggtgggagtttacctagatcatggggctgggaatgtttcattctatagtgctgtggat
ggggtgcacctacacactttttcttttcctttcgtttctcgcctccggccatttttttgg
ttgagtccattagcatctttagtcatcccagtgactgatgggaaataa
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