Oryctolagus cuniculus (rabbit): 100349970 Help Entry 100349970         CDS       T03373                                  Name (RefSeq) cysteine protease ATG4D   KO K08342   cysteine protease ATG4 [EC:3.4.22.-] Organism ocu  Oryctolagus cuniculus (rabbit) Pathway ocu04136   Autophagy - other ocu04140   Autophagy - animal Brite KEGG Orthology (KO) [BR:ocu00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     100349970    04136 Autophagy - other     100349970  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:ocu01002]     100349970   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ocu04131]     100349970    03029 Mitochondrial biogenesis [BR:ocu03029]     100349970 Peptidases and inhibitors [BR:ocu01002]  Cysteine peptidases   Family C54: Aut2 peptidase family    100349970 Membrane trafficking [BR:ocu04131]  Autophagy   Autophagosome formation proteins    Atg8 conjugation proteins     100349970 Mitochondrial biogenesis [BR:ocu03029]  Mitochondrial quality control factors   Mitophagy factors    Autophagy-related proteins     100349970 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Peptidase_C54 Motif Other DBs NCBI-GeneID:  100349970 NCBI-ProteinID:  XP_008249765 Ensembl:  ENSOCUG00000014176 LinkDB All DBs Position Unknown AA seq 522 aa AA seqDB search MAAAARAGPGSMGGVGRVARPADTACWPRGAPGARRPQPLPGPSGRPPGAPMNSVSPAAA QYRSGSPEHARRPEARRPRGPRAPDPNGLGPPGAGGPARASPGAAAGEPDEVDKFKAKFL TAWNNVKYGWAVKSRTSFSKISSVHVCGRRYRFEGEGDIQRFQRDFVSRLWLTYRRDFPP LAGGCLTSDCGWGCMLRSGQMMLAQSLLLHFLPRDWTWAEGLGSAEPAGSASPSRYRGPA RWMPPRWAQGAPELEQERRHRQIVSWFADHPGAPFGLHRLVELGQSSGKKAGDWYGPSLV AHILRKAVESCSEVTRLVVYVSQDCTVYKADVARLVARPDPTAEWKSVVILVPVRLGGET LNPVYVPCVKELLRLELCLGIMGGKPRHSLYFIGYQDDFLLYLDPHYCQPTVDVSQTDFP LESFHCTSPRKMAFAKMDPSCTVGFYAGGRKEFETLCSELTRVLGSSSATERYPMFTLAE GHAQDHSVDDLCSQPSSPPAPPLPRAGRLKAKRPSAEDFVFL NT seq 1569 nt NT seq  +upstreamnt  +downstreamnt atggcggcggcggcgcgcgccggccccgggagcatggggggcgtgggccgagtagcgcgc cccgccgacaccgcgtgctggccgcggggcgcccccggggcgcggcggccgcagcccctg cccgggccgtcgggccgccctcccggcgcgcccatgaactccgtgtcgccggccgccgcg cagtaccggagcgggagcccggagcacgcgcgccggcctgaggcccgcaggccgcgggga ccccgagccccagaccccaacggcctgggaccccccggagccggcggccccgcccgtgcc tctccgggggccgctgcaggggagccggacgaagtggacaagtttaaggccaagttcctc acggcctggaacaacgtcaagtacggttgggctgtcaaaagccggaccagctttagcaag atctccagtgtccatgtgtgcggccggcgctaccgtttcgagggcgagggtgacattcaa cgcttccagcgggactttgtgtcccgcctgtggctcacctaccgccgagatttcccgccc ctggcggggggctgcctcacttcagactgcggctgggggtgcatgttacggagtggccag atgatgctggcccagagcctgctgctgcacttcctgcccagggactggacgtgggccgag ggcctgggctctgctgaaccggcggggtcggcctctcccagccggtaccgggggcctgcc cgctggatgcccccacgctgggcccagggcgccccagagctggagcaggaacgccggcac cggcagatcgtgtcctggttcgccgaccaccccggggcccccttcggcctgcaccgcctg gtggagctggggcagagctcaggcaagaaggcgggagactggtacgggccatcgctggtg gcacacatcctcaggaaggccgtggagagctgctcggaggtcacgcgcctggtggtgtac gtgtctcaggactgcacagtgtacaaggccgacgtggctcgcctggtggccaggccggac cccacagccgagtggaagtctgtggtcatcctggtgcccgtgcggctgggtggcgagacg ctcaaccctgtgtacgtgccctgcgtgaaggagctcctgcgcctggagctgtgcctgggc atcatggggggcaagccgcgccactcactgtacttcatcggctaccaggacgacttcctg ctctacctggacccccactactgccagcccactgtggacgtcagccagactgacttcccc ctggagtctttccattgcacctcacctcgcaagatggccttcgccaagatggacccgagc tgtaccgtgggcttctacgctggaggcaggaaggagtttgagaccctctgctcagagctg accagggtcctcggctcctcctccgccaccgagcgctaccccatgttcaccctggccgag ggccacgctcaggaccacagcgtggacgacctgtgctcgcagccgtcctccccgccggcg ccgccgctcccgcgcgccgggcgcctcaaggccaaacgccccagcgccgaggacttcgtg tttttatag

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