Oryctolagus cuniculus (rabbit): 100349989
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Entry
100349989 CDS
T03373
Name
(RefSeq) protocadherin beta-16
KO
K16494
protocadherin beta
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocu04515
]
100349989
Cell adhesion molecules [BR:
ocu04515
]
Cadherins
Protocadherins
100349989
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
VWA_3_C
Motif
Other DBs
NCBI-GeneID:
100349989
NCBI-ProteinID:
XP_017196601
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Position
3:23148190..23166719
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AA seq
815 aa
AA seq
DB search
METGWMRHGRSRQAVLFFVLLSMLGAGADLGPYAVVEETERGFFVANLGKDLGLGPKELS
SRGARIISQGNTEHLQLRVQTGDLLINERLDREDLCGPLEPCILYFQVLMEKPLEIIQAE
LRVADINDHAPVFSEREMILKIPENSPLGSAYPLNNALDLDVGSNNVQNYKISSNSHFCV
LTRERSDGRKYPELVLDKELDREEEPELRLTLTALDGGSPPRSGSAEVLIEVVDTNDNAP
EFAQPLYRVQVPEDSPEGSLAVTVFATDLDSGDYGKISYTLVQPSEGISDTLEVNPVTGA
VRLRKQIDFERVQSYEVDIKATDGGGLSGKCTLLLQVVDVNDNPPEVTMSALNSPIPENA
PETVVAVFSVSDPDSGDNGRTISSIQEDLPFILKPSVKNFYTLVTESPLDRETRAEYNIT
ITVSDLGTPRLTTRHHVAVQVSDVNDNAPAFSQAAYTLLVRENNSPGLLIGSVSASDRDA
GANAQVTYSLLPPPQQPDVAALVSVHADSGQLYALRALDYEALRAFEFGVRAADRGSPAL
SSEARVRVQLLDANDHAPAVLYPPANGSAACPELVPRAADAGYLVTKVVAVDGDAGQNAW
LSFELLKATEPGLFGVWAHSGEVRTARPLSERDAPRQRLLVLVRDHGEPPLSASVTLHVL
LVDGFSQPYLALPEAAAAAEAARPDSLTVQLVVALAAVSSLLVLSVLALVAARLCGAGAG
GGAGGVGVGAGCAVGGGGGGGGAGAEGRFPGPLLDVSGGGTLSHSYQYEVRLTGDAGTGE
FKFMKPISPILTTQYPGKEIEEAPTFHNAFGFDIQ
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atggagactggatggatgcgccatgggagatcaaggcaagctgtgcttttctttgttttg
ctgagcatgcttggggcgggcgcggatctggggccctacgcagtggtggaagaaacggag
agaggcttctttgtggcaaatctaggaaaagatctaggactggggccgaaggagctgtcc
tcccgtggggcccggatcatttcccaaggaaacacagagcatttgcagctccgggttcaa
actggggatttactcattaatgagagactggatcgagaggacctatgcggtccccttgag
ccttgcatactgtatttccaagtgctgatggaaaaacccttagagataattcaggctgaa
ctgagggtggcagacataaacgaccatgcccctgtgttctccgaaagagaaatgattcta
aaaataccagaaaacagccctctaggaagcgcgtaccccctgaataatgctctggatttg
gacgtaggaagcaacaacgttcaaaactataaaatcagctccaattcccatttttgcgtt
ctaacccgcgaacgcagcgatggcaggaaataccctgagctggtgttggataaagagctg
gaccgggaggaggagcctgaactgagattaactctgacggcgctggatggcggctctccg
ccccgctctggctccgcagaggtgctcattgaagttgtggacacgaatgataacgccccc
gagtttgcgcaaccgctctacagggtgcaggttccggaggacagccccgagggctccttg
gctgtcacggtattcgccactgatttagacagtggggactatgggaaaatatcgtacacg
ctcgttcagccttcagaaggtatcagcgacactttggaggtaaatcctgtgacaggagca
gttcgactgagaaaacaaatagactttgaaagagtccagtcttatgaagtggacatcaag
gccacggacgggggaggtctttcaggaaaatgcactctgctcctgcaggtggtggacgtg
aacgacaatccgccagaggtgacgatgtctgcactcaacagccccatcccggagaacgcg
cccgagactgtagttgctgttttcagcgtctcggatcctgattccggggacaacgggagg
accatttcctccatccaggaagacctcccattcattctgaaaccgtcagttaagaacttc
tacaccctggtaactgagagcccgctggacagggagaccagggccgagtacaacatcacc
atcaccgtgtccgacctgggcacgcccaggctgaccacccggcaccacgtcgcggtgcag
gtgtccgacgtgaacgacaacgccccggccttcagccaggccgcctacaccctgctggtg
cgcgagaacaacagccccgggctgctcatcggctccgtgagcgccagcgacagggacgcg
ggcgccaacgcgcaggtgacctactcgctgctgccgccgccacagcagcccgacgtggcg
gcgctcgtgtcggtgcacgcggacagcgggcagctgtacgcgctgcgcgcgctcgactac
gaggccctgcgcgccttcgagttcggcgtgcgcgccgccgaccgcggctccccggcgctg
agcagcgaggcgcgcgtgcgcgtgcagctgctggacgccaacgaccacgcgccggccgtg
ctgtacccgccggccaacggctcggccgcctgccccgagctggtgccgcgcgcggccgac
gcgggctacctggtgaccaaggtggtggcggtggacggcgacgcgggccagaacgcctgg
ctgtcgttcgagctgctcaaggccacggagcccgggctgttcggcgtgtgggcgcacagc
ggcgaggtgcgcacggcgcggccgctgagcgagcgcgacgcgcccaggcagcggctgctg
gtgctggtgcgcgaccacggcgagccgccgctgtcggccagcgtcacgctgcacgtgctg
ctggtggacggcttctcgcagccctacctggcgctgcccgaggcggcggcggcggccgag
gcggcgcggcccgactcgctcacggtgcagctggtggtggcgctggcggcggtgtcgtcg
ctcttggtgctgagtgtgctggcgctggtggcggcgcggctgtgcggcgcgggcgcgggc
gggggcgcgggcggtgtcggtgtgggggcggggtgtgcggttggcggcggcggcggcggc
ggcggcgcgggtgcggagggccgcttcccggggccgctgctggacgtgagcggcggcggg
acgctgtcgcacagctaccagtacgaggtgcgcctgacgggcgacgctgggaccggggag
ttcaagttcatgaagcccattagccccatccttacaacccaataccccgggaaagaaata
gaggaagctcccactttccacaatgcgtttggattcgatattcagtga
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