Oryctolagus cuniculus (rabbit): 100350002
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Entry
100350002 CDS
T03373
Name
(RefSeq) pseudouridylate synthase PUS7L isoform X4
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ocu03016
]
100350002
Enzymes [BR:
ocu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
100350002
Transfer RNA biogenesis [BR:
ocu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
100350002
Prokaryotic type
100350002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
R3H_PUS7L
PUS7L_N
R3H
Motif
Other DBs
NCBI-GeneID:
100350002
NCBI-ProteinID:
XP_002712696
Ensembl:
ENSOCUG00000004093
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All DBs
Position
8:complement(108865656..109012404)
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AA seq
693 aa
AA seq
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MEEDADYIRFSSVYFLNDHIGFHGTIKNSPKDFIVTEIDEQGQLVSKPFDELTTKSHIAK
PHNFAKKPKLDLKKNSSVDDGSEEVDTSARCSDGDPGDQCDSDQEDSLSGDTSECKGETA
DALSAFLDDKTNELLSQFALETKEKWNAGTEQVGPPSELFLGVISGKRRRAALHSAITQK
FPFLLTTTKTCKVVVRPNLRYKELCDLVSEEEASGFFKYLGAKKENSRFAFKPDTNKERR
RAVHHFVNERFGRLLETESSELGCCDGDQKLVVTVRLREEAHSHRKRSREKVAHTAFTLR
KENVDMFEAIDHLAAKLGVIPPDFSYTGLKDKKAITYQAMVVRKVTPERLKSIEKEIAKK
GMNVFNVRSVNAALRLGQLKGNHFDIVIRNVRNWNGDPVNLRERILEAIENVKNNGFVNY
YGPEQLEKERNVHADQIGLALLKEEMVKSVKLFLTPEDVDDPVNRAKKYFLQTEDAKGTL
ELMPEFRVRERELLELLHRFSLTEEGCTNVWYCLPHHVRTVYVHAYLSQVWNEAASYRLE
AYGTRVVEGDLVCLDDVLDQEHCPNSKVHLVTKEEELANTYTIYQVVLPVLGHSTQYPGN
LVGQWYQELLSRDGLQTCGFRVPALNLNMPGCYRQILKQPHNLCHQLLEDPSSGVSREDP
AGSAVPLCLCISFDLDASCCATVFLKEMMKHDI
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggatgcagattatatccgatttagttctgtgtatttccttaatgatcacatt
ggatttcacggcactataaaaaactcaccaaaggactttattgttactgagattgatgaa
cagggacagttagtcagtaagccctttgatgagcttactactaaaagccacattgctaag
ccacataattttgccaaaaagccaaaactggatcttaaaaaaaattcatctgttgatgat
ggaagtgaagaagttgatacttcggctaggtgctctgatggtgacccaggtgaccaatgt
gattcagaccaggaagacagcctcagtggtgacacttctgagtgtaaaggagaaacagct
gatgcactaagcgcgtttttagatgacaaaacaaatgaactcttgagtcagttcgccctt
gaaaccaaagagaagtggaacgctggcactgagcaagtcggaccaccttctgaattgttc
ttaggcgtgatttctggcaaaaggcgcagggctgctttacatagtgctattacacagaaa
tttccttttttactgactacaacaaaaacctgtaaagttgttgtaagaccaaatcttagg
tataaagaactctgtgacttggtgtctgaagaagaagcatctgggttttttaaatatttg
ggtgcgaagaaagaaaattccaggtttgcttttaagcctgatacaaacaaagagcgcaga
agagccgtccaccattttgtaaatgaaaggtttgggcgcttgttggaaaccgagtcttct
gaattgggttgctgtgacggagatcagaaattggtggtgacagtaaggttgcgtgaagaa
gcccacagccacaggaagaggtctcgggagaaagttgcacatacagcttttaccctacga
aaggaaaatgtggacatgtttgaagcaattgatcatttagctgccaaacttggtgtgatt
cctccggattttagttacacaggccttaaagacaagaaagccataacctaccaagccatg
gttgttagaaaagtgactcctgagaggttgaaaagtattgaaaaagaaattgcaaagaag
ggaatgaatgtgtttaatgtccgatctgtgaatgcagctctgagacttggtcaactaaaa
ggaaatcactttgacattgtcatcaggaatgtaagaaattggaacggtgatcctgtaaac
ctgagagagaggattttggaggccatagaaaacgtgaagaataatggctttgtgaattac
tatggtcctgagcagttggagaaggaaaggaatgttcatgctgaccagattggattggct
ttgctgaaggaggagatggtgaagtctgtaaaactgtttcttactccagaagatgtggat
gatcctgtaaacagagcaaagaaatattttcttcaaaccgaggatgccaagggcacactt
gagctgatgcctgagttcagagttcgggagagagagctgttggagttgcttcatcgcttc
agcctgacagaggaaggctgtaccaatgtgtggtactgtcttccccaccacgtgcgcacg
gtgtatgtccacgcttacctcagccaagtctggaacgaggccgcgtcctacaggcttgag
gcctatggaacccgtgtggtggagggcgacctggtgtgtctggacgacgtccttgaccag
gagcattgcccaaacagtaaagttcatctggtaaccaaggaagaggaattggctaacaca
tatacaatatatcaggtggttctaccagtgcttggccacagtactcagtatccagggaac
ctggtggggcaatggtaccaggaactgctcagcagagacgggctgcagacatgcggcttc
agagtgcccgctctgaatctgaatatgccagggtgctaccggcagatcctgaagcagccc
cacaacctctgccaccagctcctggaggaccccagctctggggtcagcagggaagaccct
gccggcagtgcagtgcctttatgtctatgcatttcttttgaccttgatgcttcctgttgt
gctacagtcttcctgaaggaaatgatgaagcatgacatttga
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