KEGG   Oryctolagus cuniculus (rabbit): 100350130
Entry
100350130         CDS       T03373                                 
Name
(RefSeq) DNA repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    100350130
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ocu03400]
    100350130
DNA repair and recombination proteins [BR:ocu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     100350130
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 100350130
NCBI-ProteinID: XP_051695046
Ensembl: ENSOCUG00000005387
LinkDB
Position
Unknown
AA seq 627 aa
MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQFEKEEQIHSVDI
GNDGSAFVEVLVGSSATGAGEQDYEVLLVTSSFMSPSESRSGSNPNRVRMFGPDKLVRAA
AEKRWDRVRIVCSQPYSKDAPYGLSFVRFHSPPDKDEAEVPAQKGTVTKLGQFRVKEEDE
GASALRPGALFFNRINKTSPTTARDPAGPSYAAATLQASSAAASASPVSKPQESPKGKRK
LDLSQEERKAPSKRPAQLSALAGKKPKLPAPSRTPAAAPVPAAAQGAVVGKPRDEGEGAE
PRAPRAGPQELGKILQGVVVVLSGFQNPFRSELRDKALELGAKYRPDWTPDSTHLICAFA
NTPKYSQVLGLGGRIVRKEWVLDCHRMRRRLPSRRYLMAGPSSSSEDEGGSHSGGSGDEA
PRLPRKRPQTKARPPQAAGPSSPQRPPTPKETKAASPAPQDDTDTEGEPSGQDDGAEDSG
DTEDELRRVAEQKDQRRPPDQGENGEDPYAGSTDENTDNEDEPEPPDLPVPELPDFFQGK
HFFLYGEFPGDERRKLIRYVTAFNGELEDYMSDRVQFVITAQEWDPSFEEALMDNPSLAF
VRPRWIYSCNEKQRLLPHQLYGVVPQA
NT seq 1884 nt   +upstreamnt  +downstreamnt
atgccggagatccgcctccgtcatgtcgtgtcctgtagcagccaggactcgactcactgc
gcggaaaacctcctcaaagccgacacttatcggaaatggcgggccgccaaggcgggggag
aagaccatctccgtggtcctgcagtttgagaaggaggagcagatacacagcgtggacatc
ggcaacgatggctcggcctttgtggaggtgctcgtgggcagctcagccacaggagccggc
gagcaagactacgaggtccttctggtcacgtcgtctttcatgtccccttccgagagccgc
agcggctcaaaccccaaccgggttcgcatgttcgggcctgacaagctggtccgggcagca
gccgagaagcgctgggaccgcgtcaggatcgtctgcagccagccctacagcaaggacgcc
ccctacggcctgagctttgtgcggttccacagccccccagacaaagatgaagcggaggtc
ccggcccagaaggggacagtgaccaagctgggccagttccgcgtgaaggaggaagacgaa
ggcgccagcgccctgagacccggggctctcttcttcaaccggatcaacaagacgtccccc
accacagccagggacccggcaggccccagctacgcagctgccaccctccaggcctccagt
gccgccgcctcggcctctcccgtctccaagcctcaggagtctcccaaggggaagaggaag
ctggatttgagtcaagaggagcggaaggcccccagcaagcggccggcccagctctcagcc
ctggctggcaagaaacccaaactgccagctcccagccgtaccccggccgcggcccccgtc
cctgctgcagcacagggggcagtggtggggaagccgcgggatgaaggtgaaggcgccgag
cccagggccccccgagccggcccccaggagctggggaagatccttcaaggggtggtggtg
gtgctgagtggcttccagaaccccttccgctcggagctgcgggacaaggccctggagctg
ggggccaagtaccggccagactggaccccggacagcacccatctcatctgtgcctttgcc
aacacccccaagtacagccaggtcctgggcctcggaggccgcatcgtgcgtaaagagtgg
gtgctggactgtcaccgcatgcggcggcggctgccctcccggaggtacctcatggcagga
cccagctccagcagcgaggacgagggtggctctcacagcggcggcagcggggacgaagcc
cccaggcttccccggaagcgtccccagaccaaagccaggccccctcaggcagctggaccc
agctcaccccagaggcctccaacccccaaagagaccaaagcagcctcacccgctccccag
gatgacacagacactgagggggagccgtcaggacaagacgatggggccgaggattctggg
gacacggaggacgagctgaggagggtggcggagcagaaggaccaaaggcggccccctgac
cagggcgagaacggcgaggacccgtacgcaggctccactgacgagaacacggacaacgag
gatgagccggagccgcccgacctgccggtccccgagctcccagacttcttccagggcaaa
cacttcttcctgtatggggagttccccggggacgagcggcgcaagctcatccgatacgtc
accgccttcaacggggagctggaggactacatgagcgaccgcgtgcagttcgtgatcacg
gcacaggagtgggaccccagctttgaggaggccctgatggacaacccgtccctggccttc
gtccgcccccgctggatctacagttgcaacgagaagcagaggctgcttccgcaccagctc
tacggggtggtgccccaggcctga

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