Oryctolagus cuniculus (rabbit): 100350226
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Entry
100350226 CDS
T03373
Name
(RefSeq) autophagy-related protein 13 isoform X6
KO
K08331
autophagy-related protein 13
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04136
Autophagy - other
ocu04140
Autophagy - animal
ocu04211
Longevity regulating pathway
ocu05010
Alzheimer disease
ocu05014
Amyotrophic lateral sclerosis
ocu05016
Huntington disease
ocu05017
Spinocerebellar ataxia
ocu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100350226
04136 Autophagy - other
100350226
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
100350226
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
100350226
05014 Amyotrophic lateral sclerosis
100350226
05016 Huntington disease
100350226
05017 Spinocerebellar ataxia
100350226
05022 Pathways of neurodegeneration - multiple diseases
100350226
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocu04131
]
100350226
03029 Mitochondrial biogenesis [BR:
ocu03029
]
100350226
Membrane trafficking [BR:
ocu04131
]
Autophagy
Autophagosome formation proteins
ULK complex
100350226
Atg1 complex
100350226
Mitochondrial biogenesis [BR:
ocu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
100350226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
100350226
NCBI-ProteinID:
XP_002709125
Ensembl:
ENSOCUG00000016144
UniProt:
A0A5F9DC56
LinkDB
All DBs
Position
1:199742026..199808473
Genome browser
AA seq
480 aa
AA seq
DB search
METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLNGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRATGEDPGV
AYPSVEDSQEVCTTSFSTSPPSQLMVPGKEGGVPLAPSQPAHGAQADQERLATYTPSDGA
HCAATPSSSEDTETVSNSSEGRASPRDVLETAFVRKVGAFVNKPINQVALTSLDIPFAMF
APKDLELEDTDPMVNPPDSPDPESPLQRSLHSDGSSGGSSGNAHDDFVMIDFKPAFSKDD
ILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKNVREFDAFVETLQ
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgatctcaattcccaagacagaaaggacctggacaagttcattaaatttttt
gccctcaagactgtccaagtgatcgtccaggctcgacttggtgagaagatctgtactcgc
tcatcttcatccccgacgggttcagactggtttaacttagcaatcaaagatatcccagag
gttacacatgaagcaaagaaggcgctggcaggacagctgcctgctgtcgggaggtccatg
tgtgtggagatctctctcaagacttctgagggagattctatggagctggaaatttggtgt
cttgaaatgaacgaaaagtgtgataaagaaatcaaagtttcctacacggtgtacaacagg
ctgtcactgctgctgaagtctctccttgcaataactcgggtaacgccagcctacagactc
tccagaaaacaggggcatgaatacgtcatactgtacaggatatattttggggaagttcaa
ctgaatggcctaggagaaggtttccagactgttcgtgttgggacagtgggcacccccgtg
ggcaccatcactctttcttgtgcttacagaattaacttggcattcatgtcaaccaggcag
tttgagcggaccccacctatcatggggattatcattgatcactttgtggaccggccctat
cccagctcctctcccatgcatccctgcaattacagagctaccggtgaggaccccggggtc
gcatacccatccgtggaagactctcaagaagtgtgcaccacctctttttccacctcccct
ccatcccagctgatggtccctgggaaagaaggtggagtaccccttgctcccagccagcct
gcccacggtgcccaggctgaccaggagagactggccacctacaccccttctgacggggcc
cactgtgctgccacaccttccagcagcgaggatacggaaaccgtgtcgaacagcagcgag
gggcgggcctccccccgggatgtcctggagacagccttcgtccgaaaagtgggggccttc
gtcaacaagcccatcaaccaggtggccctgaccagcttggacatacccttcgccatgttt
gctcccaaggatttggagctggaggatactgaccccatggtgaaccccccagactccccg
gaccccgagtctcctctccagcgcagcctgcactcagacggctccagtggaggcagcagc
ggcaacgcccacgatgacttcgtgatgatcgactttaaaccggctttttctaaagacgat
attctcccaatggacttggggaccttctatcgggaattccagaacccgcctcagctgagc
agcctctccatcgatattggagcacagtccatggctgaagacttggactcgctcccagag
aagctggctgtgcacgagaagaacgtccgagaatttgacgcctttgtggaaaccctgcag
taa
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