Oryctolagus cuniculus (rabbit): 100350520
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Entry
100350520 CDS
T03373
Name
(RefSeq) VPS10 domain-containing receptor SorCS3 isoform X1
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocu04131
]
100350520
Membrane trafficking [BR:
ocu04131
]
Endocytosis
Others
Others
100350520
Endosome - Lysosome transport
100350520
Endosome - Golgi transport
100350520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
100350520
NCBI-ProteinID:
XP_051679525
Ensembl:
ENSOCUG00000013880
LinkDB
All DBs
Position
18:49479581..50119986
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AA seq
1222 aa
AA seq
DB search
METARTERPTGWPGAPLAQTGLLLLSTWVLAGAEITWGAAGGPERPTAPASRPPVSLPLS
PRAMASQWPEELATVPRAAALGRRPIRELLSQPGGGSGGAVQVEAGGTSPAGARRGQGVP
APGKPGGARRTRRAQPPSTLERGDARATVPADGSKGSRPAAKGSREEVKAPRAGGTAAEE
LRLPSTSFALTGDSAHNQAMVHWSGHNSSVILILTKLYDFNLGSVTESSLWRSTDYGTTY
EKLNDKVGLKTVLSYLYVNPTNKRKIMLLSDPEMESSILISSDEGATYQKYRLAFYIQSL
LFHPKQEDWVLAYSLDQKLYSSMDFGRRWQLMHERITPNRFYWSVAGLDKEADLVHMEVR
TADGYAHYLTCRIQECAETTRSGPFARSIDISSLVVQDEYIFIQVTTGGRASYYVSYRRE
AFAQIKLPKYSLPKDMHIISTDENQVFAAVQEWNQNDTYNLYISDTRGIYFTLAMENIKS
SRGLMGNIIIELYEVAGIKGIFLANKKVDDQVKTYITYNKGRDWRLLQAPDVDLRGSPVH
CLLPFCSLHLHLQLSENPYSSGRISSKETAPGLVVATGNIGPELSYTDIGVFISSDGGNT
WRQIFDEEYNVWFLDWGGALVAMRHTPLPVRHLWVSFDEGHSWDKYGFTSVPLFVDGALV
EAGVETHIMTVFGHFSLRSEWQLVKVDYKSIFSRHCTKEDYQTWHLLNQGEPCVMGERKI
FKKRKPGAQCALGRESSGSVVSEPCVCADWDFECDYGYERHGESQCVPAFWYNPASPSKD
CSLGQSYLNSTGYRRIVSNNCTDGLRDKYSAKAQLCPGKAPRGLHVVTTDGRLVAEQGHN
ATFIILMEEGDLQRTNIQLDFGDGIAVSYANFSPIEDGIKHVYKSAGIFQVTAYAENSLG
SDTAVLFLHVVCPVEHVHLRVPFVAIRNKEVNISAVVWPSQLGTLTYFWWFGNSTKPLIT
LDSSISFTFPAEGTNTITVQVAAGNALIQDTKDIAVHEYFQSQLLSFSPNLDHHNPDIPE
WRQDIGNVIKRALIKVTSVPEDQILVAVFPGLPTSAELFILPPKNLTERRKGNEGDLEQI
AETLFNALNQNLVQFELKPGVQVIVYVTQLTLAPLVDSSTGHSSSAMLMLLSVVFVGLAV
FLIYKFKRKIPWINIYAQVQHDKEQEMIGSVSQSENAPKITLSDFTEPEELLDKELDTRV
IGGIATIANSESTKEIPNCTSV
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atggagacagcgcgcaccgagcgccccactggctggccaggggcgcccctcgcccagacg
gggctcttactcttgtcaacgtgggtcctggccggcgccgagatcacttggggcgcggcg
ggcggtcccgagcgccccacggccccggcttcgcggccaccggtgtcgcttcctctctcg
ccgcgggcaatggcgagccagtggccggaggagctagcgacggtgccgagagccgccgcg
ctggggcgccggcccatacgagagctgctgtcccagccgggcggcggcagcggcggtgcg
gtgcaggttgaagcgggagggacgtcgccagccggcgcgcggaggggccagggcgtccca
gctcctggcaagcctggcggcgcgaggaggactcgccgggcgcagccccccagcaccctg
gagcgcggggacgcccgggctactgttccggcggacggttctaaaggcagccgcccggcg
gccaagggttcccgggaggaggtgaaggcgccgcgggctgggggaacggcggcggaagag
ctccggctgccgagtacctcgttcgcgctgaccggggactccgcgcacaaccaagccatg
gtgcactggtcgggacacaacagcagcgtcatccttatcctgacgaagctatatgacttc
aacctggggagcgtgacggagagttcactttggaggtcaacggattatggcaccacctat
gaaaagctgaatgacaaagtgggtttgaagactgtcctcagttacctgtatgtcaacccc
accaacaaaaggaagatcatgcttctgagtgatcctgaaatggagagcagtatattgatc
agctcagatgaaggggcaacctatcaaaagtaccggctcgccttttacatccagagcctg
ctcttccatcccaagcaagaggactgggtgctggcctacagtctggatcaaaagctctac
agctccatggactttggcagacggtggcaactcatgcacgagcgcatcacacccaaccgg
ttttactggtcggtggctggattggataaggaggcagacctggtgcacatggaggtgcgg
actgcagatggatatgctcactacctcacctgcaggatccaggaatgtgctgagaccacc
cggagtgggccctttgcccgctccattgacatcagttccctggtagtccaggatgaatac
atcttcattcaggtaaccactggtggaagagccagctactacgtgtcctatcgaagagag
gcctttgctcagataaagctgcccaagtactcattgccaaaggacatgcacatcatcagc
acagatgagaaccaagtgtttgcggcagttcaagagtggaaccagaacgacacttacaac
ctctacatctcagacacgcgtgggatctacttcaccttggccatggagaacattaagagc
agccgaggtctaatgggaaacatcattattgaactgtatgaggtagcaggtatcaaaggg
atattcctggcaaacaagaaggtggatgaccaggtgaagacatacatcacttataacaaa
ggcagagattggcgcctactgcaagcaccagatgtggacctcagaggaagccccgtgcac
tgtctgctgcccttctgttccttacacctgcacttgcagctttctgaaaatccgtattcc
tcaggaagaatctctagcaaggagacagccccaggactagtggtagccacaggcaacatt
ggcccagagctctcatatactgatattggtgtgttcatctcctctgatgggggcaacaca
tggagacagatctttgatgaagagtacaatgtctggttcctagactggggtggcgccctc
gtggccatgagacacacacctctgccagtcaggcatttgtgggtgagttttgatgagggc
cactcgtgggacaagtacggtttcacctcggttcctctgtttgttgacggggcgctggtg
gaggcaggagtggagacccacatcatgacagtttttggccacttcagcctccgctctgaa
tggcagttggtgaaagtggactacaaatctatcttcagccggcactgcactaaggaggac
tatcagacctggcacctgctcaatcagggagagccttgtgttatgggcgaaaggaaaata
ttcaagaaacgcaagccaggagctcagtgtgccttgggccgagagagctcagggtctgtg
gtctcagaaccctgtgtctgtgccgactgggatttcgagtgtgactatggttatgagaga
catggggaaagccagtgtgtaccagctttctggtacaatccagcatctccatcaaaggac
tgcagcctgggacaaagctaccttaacagcactgggtaccggaggatagtatccaacaac
tgcacagatgggctaagggacaagtactcagccaaagcccagctgtgccctggaaaagcc
cctcgaggcctccacgtggtgacgaccgatggacgcctggtggcagaacagggacataat
gcaaccttcatcatcctcatggaggagggtgatctgcaaaggacaaacatccagcttgac
tttggggatgggattgctgtgtcctatgctaacttcagccccattgaggatggcatcaag
catgtgtataagagcgcggggatcttccaggtgacagcctatgcagagaacagccttggc
tcagacacagctgtcctcttcctgcacgtagtttgtccagtggagcatgttcatctccga
gttccatttgttgccataagaaataaagaggtcaacatcagtgctgttgtgtggcccagt
cagctggggactctgacctatttctggtggtttggtaatagtacaaagcccctcatcacc
ttggacagcagcatttctttcacttttcctgctgaaggaaccaacaccatcacagtgcaa
gtggctgccgggaatgcccttatccaggacacgaaagatattgccgtacacgaatacttc
cagtcccagctcttgtcattctctcctaatctggatcaccacaatcctgacattcctgag
tggaggcaagacattggcaatgtcataaagagagctcttattaaagtaaccagcgtcccg
gaagaccagatcctcgttgctgtcttccctggcctccctacatcagcagagctcttcatt
ctcccacctaagaacttgacagagaggaggaaaggcaatgaaggggacctggaacaaatt
gcagagacactatttaatgctctaaaccaaaacttggtccagtttgagctgaagccaggg
gtccaagtcattgtgtacgtcacacagctaacattagctccactggtagactccagcact
gggcacagcagctcagccatgcttatgctcctgtccgtggtgtttgtcggcttggccgtg
tttttgatctacaaattcaagaggaaaatcccctggattaacatctatgctcaagtccaa
cacgacaaggagcaggagatgattgggtcagtgagccaaagtgagaatgcccccaaaatc
actctcagtgacttcaccgagcctgaggaactgctggacaaagagctggacacgcgggtc
ataggaggcatcgccaccatcgcaaacagcgaaagcacaaaggagattcccaactgcact
agtgtttaa
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