Oryctolagus cuniculus (rabbit): 100350576
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Entry
100350576 CDS
T03373
Name
(RefSeq) POU domain, class 2, transcription factor 1 isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu05168
Herpes simplex virus 1 infection
ocu05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100350576
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100350576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocu03000
]
100350576
03021 Transcription machinery [BR:
ocu03021
]
100350576
Transcription factors [BR:
ocu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
100350576
Transcription machinery [BR:
ocu03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
100350576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
100350576
NCBI-ProteinID:
XP_051713096
Ensembl:
ENSOCUG00000015479
LinkDB
All DBs
Position
13:complement(25854025..26042940)
Genome browser
AA seq
769 aa
AA seq
DB search
MADGGAASQDESSAAAAAAADSRMNNPSETSKPSMESGDGNTGTQTNGLDFQKQPVPVGG
AISTAQAQAFLGHLHQVQLTGTSLQAAAQSLNVQSKSNEESGDSQQPAQPSQQPSVQAAI
PQTQLMLAGGQITGLTLTPAQQQLLLQQAQAQAQLLAAAVQQHSASQQHSAAGATISASA
ATPMTQIPLSQPIQIAQDLQQLQQLQQQNLNLQQFVLVHPTTNLQPAQFIISQTPQGQQG
LLQAQNLLTQLPQQSQANLLQSQPSITLTSQQPATPTRTIAATPIQTLPQSQSTPKRIDT
PSLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSF
KNMCKLKPLLEKWLNDAENLSSDSALSSPSALNSPGQGVEGLNRRRKKRTSIETNIRVAL
EKSFLENQKPTSEEISMIAEQLNMEKEVIRVWFCNRRQKEKRINPPSSGGTSSSPIKAIF
PSPTSLVATTPSLVTSSAATTLTVNPVLPLASAAVTNLSVTGTTDTTSNNTATVISTAPP
ASSAVTSPSLSPSPSASASTSETSSASETSTTQTTSAPLSSPLGTSQVMVTASGLQTAAA
AALQGATQLPANASLAAMAAAAGLSPGLMAPSQFAAGGALLSLNPGTLGGALSPALMSNS
TLATIQALASGGSLPITSLDATGNLVFANAGGAPNIVTAPLFLNPQNLSLLTSNPVSLVS
AAAASAGNSTPVASLHATSTSAESIQNSLFTAASASGAASTTTTASKAQ
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaggagcagcgagtcaagatgagagttcagccgcggcggcagcagcagca
gattcaagaatgaacaatccgtcagaaaccagtaaaccatctatggagagtggagatggc
aacacaggcacacaaaccaatggtctggactttcagaagcagcctgtgcctgtgggagga
gcaatctcaacagcccaggcccaggctttccttggacatctccaccaggtccagctcact
ggaacaagtttacaggctgctgctcagtctttaaatgtacagtctaaatctaatgaagaa
tcgggggattcccagcagccagcccagccttcccagcagccttctgtgcaggcagccatt
cctcagacccagcttatgctggctggaggacagataaccgggctcactttgacgccagcc
cagcaacagttactactgcagcaggcccaggcccaggcccagctgctggctgctgcagtt
cagcagcattccgccagccaacagcacagtgctgctggggccaccatctcagcctccgcc
gccacgcccatgacgcagatccccctctctcagcccatccagatcgcgcaggatcttcag
caactacaacaacttcagcagcagaatctcaacctgcagcagtttgtgttggtacatccg
accaccaacttgcaaccagcacagttcatcatctcacagacgccccagggccagcagggt
ctcctgcaagcgcaaaatcttttaacgcaactacctcagcaaagccaagccaacctccta
cagtcgcagccaagcatcaccctcacgtcccagcagccagcaaccccaacacgcacaata
gcagcaaccccaattcagacacttccacagagccagtcaacaccaaagcgaattgatact
cccagcttggaagagcccagtgaccttgaggagctggagcagtttgccaagaccttcaaa
caaagacgaatcaaactgggattcactcagggtgatgttggcctcgctatgggtaaactg
tatggaaatgacttcagccaaactaccatctctcgctttgaagccttgaacctcagcttt
aagaacatgtgcaagttaaagccacttttagaaaagtggctaaatgatgcagagaacctc
tcatcggattcagcgctctccagcccaagtgccctaaattctccagggcagggagttgag
ggcttgaaccgtaggaggaagaaacgcaccagcatagagaccaacatccgtgtggcctta
gagaagagtttcttggagaatcaaaagcctacctcggaagagatcagcatgattgctgaa
cagctcaatatggaaaaggaggtgattcgtgtttggttctgtaatcgccgccagaaggaa
aaaagaatcaaccccccaagcagcggtgggaccagcagctcccctatcaaagcaattttt
cccagcccaacttcactggtggcaaccacgccaagccttgtgacaagcagcgcagcaact
accctcacagtcaaccctgtcctccctctcgccagcgccgccgtgactaacctctctgta
acaggcactacagacaccacctctaacaacacagcgacggtgatttccacagcgcctcct
gcttcctcagcagtcacctccccctctctgagcccctccccttccgcctcagcctccacc
tccgagacatccagtgccagtgagaccagcacaacacagaccacctccgctcctttgtcc
tcccctcttgggaccagccaggtgatggtgacagcgtcaggcttgcaaacagcagcagct
gctgccctccaaggagctacacagttgccagcaaatgccagtcttgctgccatggctgct
gctgcaggactaagcccgggcctgatggcaccctcgcagtttgcggctggaggtgcctta
ctcagtctcaatccagggaccctgggtggtgctctcagcccagctctgatgagcaacagt
acactggcgactattcaagctcttgcttctggtggctctcttccaataacgtcactggat
gcaactgggaacctggtatttgccaatgcgggaggagcccctaacatcgtgactgcccct
ctgttcctgaaccctcagaacctctctctgctcaccagcaacccggttagcttggtctct
gccgccgccgcgtccgcagggaactccacgcccgtagccagccttcacgccacctccacc
tcagccgagtccatccagaactctctcttcacggccgcctctgccagcggggcagcttcc
accaccaccaccgcctccaaggcacagtga
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