KEGG   Oryctolagus cuniculus (rabbit): 100350595
Entry
100350595         CDS       T03373                                 
Name
(RefSeq) polyadenylate-binding protein 5
  KO
K13126  polyadenylate-binding protein
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03015  mRNA surveillance pathway
ocu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100350595
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100350595
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ocu03019]
    100350595
   03041 Spliceosome [BR:ocu03041]
    100350595
Messenger RNA biogenesis [BR:ocu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     100350595
   mRNA cycle factors
    Stress granule specific factors
     100350595
Spliceosome [BR:ocu03041]
 Complex C
  Other components
   Complex C specific factors
    100350595
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_occluded RRM_10 RRM_3 RRM_RdRP1_2 TC1 ClpS
Other DBs
NCBI-GeneID: 100350595
NCBI-ProteinID: XP_017205489
Ensembl: ENSOCUG00000010919
UniProt: G1T092
LinkDB
Position
X:83277591..83287095
AA seq 382 aa
MGSGEPNPAGKKKKYLKAALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLG
YGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNR
ALFYLFSAFGNILSCKVVSDDHGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRF
KFPEERAAEVRTRDRATFTNVFVKNFGDDMDDEKLKELFSEYGPTESVKVIRDASGKSKG
FGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPP
GVPIYIKNLDESISDEKLKEEFSSFGSISRAKVMMEVGHGKGFGVVCFSSFEEATKAVDE
MNGRIVGSKPLHVTLGQARRRW
NT seq 1149 nt   +upstreamnt  +downstreamnt
atggggagcggggagccgaatcctgctggcaagaaaaagaaatacctcaaggccgccctg
tatgtaggtgacttggacccagatgtcaccgaggacatgctgtataagaagttcaggcct
gctggccctctgcgcttcacccgcatctgccgtgacccggtgacccgcagccccctgggc
tatggctatgttaacttccgctttccggcggatgccgagtgggccttgaacaccatgaat
tttgatttgattaacggcaaacccttccgcctcatgtggtcacagccagatgaccgctta
aggaagtctggagttggaaatatattcatcaaaaacctggacaaatccatagacaatagg
gccctgttttacttattttctgcttttgggaacattctctcctgcaaagtggtaagcgat
gaccacggctctaagggctatgcctatgtgcattttgacagcctggctgctgccaacagg
gccatctggcacatgaatggagtgcggctcaacaaccgccaggtgtatgttggcagattc
aaattcccggaagagcgggcagctgaagtcagaaccagggatagagcaactttcacgaat
gttttcgttaaaaactttggcgatgacatggatgacgaaaaactgaaggaactgttcagc
gaatacgggccaaccgaaagtgtcaaggtaatcagagatgccagtgggaaatcgaaaggc
tttggatttgtgagatatgagacacatgaggctgcccaaaaggctgtgctagacctgcat
ggaaagtccatcgatgggaaagtcctatacgtagggcgagcgcagaagaaaatcgaacgc
ctggctgagttaaggcggagatttgagaggctaagattaaaagaaaaaagccgccctcca
ggggtgcctatctatattaagaacctcgatgagagcatcagtgatgagaaactgaaggag
gaattttcttcctttggatcaattagccgggccaaagtgatgatggaagtggggcatggc
aaagggtttggtgttgtgtgcttctcctcttttgaagaggcaaccaaagcagtggatgag
atgaatggtcgcatagtgggttccaagcccttgcatgtcaccctgggccaggccagacgc
aggtggtga

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