Oryctolagus cuniculus (rabbit): 100350595
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Entry
100350595 CDS
T03373
Name
(RefSeq) polyadenylate-binding protein 5
KO
K13126
polyadenylate-binding protein
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03015
mRNA surveillance pathway
ocu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100350595
09123 Folding, sorting and degradation
03018 RNA degradation
100350595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100350595
03041 Spliceosome [BR:
ocu03041
]
100350595
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100350595
mRNA cycle factors
Stress granule specific factors
100350595
Spliceosome [BR:
ocu03041
]
Complex C
Other components
Complex C specific factors
100350595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RRM_10
RRM_3
RRM_RdRP1_2
TC1
ClpS
Motif
Other DBs
NCBI-GeneID:
100350595
NCBI-ProteinID:
XP_017205489
Ensembl:
ENSOCUG00000010919
UniProt:
G1T092
LinkDB
All DBs
Position
X:83277591..83287095
Genome browser
AA seq
382 aa
AA seq
DB search
MGSGEPNPAGKKKKYLKAALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLG
YGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNR
ALFYLFSAFGNILSCKVVSDDHGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRF
KFPEERAAEVRTRDRATFTNVFVKNFGDDMDDEKLKELFSEYGPTESVKVIRDASGKSKG
FGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPP
GVPIYIKNLDESISDEKLKEEFSSFGSISRAKVMMEVGHGKGFGVVCFSSFEEATKAVDE
MNGRIVGSKPLHVTLGQARRRW
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggggagcggggagccgaatcctgctggcaagaaaaagaaatacctcaaggccgccctg
tatgtaggtgacttggacccagatgtcaccgaggacatgctgtataagaagttcaggcct
gctggccctctgcgcttcacccgcatctgccgtgacccggtgacccgcagccccctgggc
tatggctatgttaacttccgctttccggcggatgccgagtgggccttgaacaccatgaat
tttgatttgattaacggcaaacccttccgcctcatgtggtcacagccagatgaccgctta
aggaagtctggagttggaaatatattcatcaaaaacctggacaaatccatagacaatagg
gccctgttttacttattttctgcttttgggaacattctctcctgcaaagtggtaagcgat
gaccacggctctaagggctatgcctatgtgcattttgacagcctggctgctgccaacagg
gccatctggcacatgaatggagtgcggctcaacaaccgccaggtgtatgttggcagattc
aaattcccggaagagcgggcagctgaagtcagaaccagggatagagcaactttcacgaat
gttttcgttaaaaactttggcgatgacatggatgacgaaaaactgaaggaactgttcagc
gaatacgggccaaccgaaagtgtcaaggtaatcagagatgccagtgggaaatcgaaaggc
tttggatttgtgagatatgagacacatgaggctgcccaaaaggctgtgctagacctgcat
ggaaagtccatcgatgggaaagtcctatacgtagggcgagcgcagaagaaaatcgaacgc
ctggctgagttaaggcggagatttgagaggctaagattaaaagaaaaaagccgccctcca
ggggtgcctatctatattaagaacctcgatgagagcatcagtgatgagaaactgaaggag
gaattttcttcctttggatcaattagccgggccaaagtgatgatggaagtggggcatggc
aaagggtttggtgttgtgtgcttctcctcttttgaagaggcaaccaaagcagtggatgag
atgaatggtcgcatagtgggttccaagcccttgcatgtcaccctgggccaggccagacgc
aggtggtga
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