Oryctolagus cuniculus (rabbit): 100350641
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Entry
100350641 CDS
T03373
Name
(RefSeq) transcriptional repressor CTCF isoform X2
KO
K23195
transcriptional repressor CTCF
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocu03000
]
100350641
03036 Chromosome and associated proteins [BR:
ocu03036
]
100350641
Transcription factors [BR:
ocu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
100350641
Chromosome and associated proteins [BR:
ocu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100350641
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
zf-C2H2_7th_ZNF462
Zf-C2H2_ZNF451_C
zf-C2H2_ZN142
zf-met
zf-C2HE
Zf-C2H2_ZNF451
zf-C2H2_6
zf-C2H2_15
zf-C2H2_CASZ1
zf-WIZ
DUF8106
Zn_ribbon_DUF2089
DUF7410
Motif
Other DBs
NCBI-GeneID:
100350641
NCBI-ProteinID:
XP_008255686
Ensembl:
ENSOCUG00000008983
UniProt:
G1SWA5
LinkDB
All DBs
Position
5:23147271..23209982
Genome browser
AA seq
732 aa
AA seq
DB search
MGEKEMEGEAVEAIVEESETFIKGKERKTYQRRREGGQEEDACHLPQNQTDGGEVVQDVN
SSVQMVMMEQLDPTLLQMKTEVMEGTVAPEAEAAVDDTQIITLQVVNMEEQPINIGELQL
VQVPVPVTVPVATTSVEELQGAYENEVSKEGLAESEPMICHTLPLPEGFQVVKVGANGEV
ETLEQGELPPQEDPSWQKDPDYQPPAKKTKKTKKSKLRYTEEGKDVDVSVYDFEEEQQEG
LLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHK
CHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSM
CDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHAR
FTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAV
FHERYALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQK
QLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENGGETKKSK
RGRKRKMRSKKEDSSDSENAEPDLDDNEDEEEPAVEIEPEPEPQPVTPAPPPAKKRRGRP
PGRTNQPKQNQPTAIIQVEDQNTGAIENIIVEVKKEPDAEPTEGEEEEAQPAATDAPNGD
LTPEMILSMMDR
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgggggaaaaggaaatggaaggtgaggcagttgaagctatcgtggaagagtctgaaact
ttcattaaaggaaaggagagaaagacttaccagagacgccgggaagggggccaggaagaa
gatgcttgccacctaccccagaaccagactgatgggggtgaggtggtgcaggatgtcaat
agcagtgtacagatggtgatgatggagcagctggatcctacccttcttcaaatgaagact
gaagtaatggagggtacagtggctccagaagcagaggctgctgtggacgatacccagatc
ataaccttgcaggttgtaaatatggaggaacagcccataaacataggagagcttcaactt
gttcaagtacctgttcctgtaacggtacctgttgctaccacttcagtagaagaacttcag
ggggcttatgagaatgaagtgtctaaagaaggccttgcagaaagtgaacccatgatatgt
cacaccttacctttgcctgaagggtttcaggtggtgaaagtgggggccaatggagaggtg
gagacactagagcaaggggaacttccgcctcaggaagatcccagctggcaaaaagaccca
gactatcagccaccagccaaaaaaacaaagaaaaccaaaaagagcaaactgcgatacaca
gaagagggcaaagatgtggatgtgtctgtctatgattttgaggaagagcagcaggagggt
ctgctgtcagaggttaatgcagagaaagtggttggtaatatgaagcctccaaagccaaca
aaaattaaaaagaaaggtgtaaagaagacattccagtgtgagctttgcagttacacgtgt
ccacggcgctcaaatttggatcgccacatgaaaagccacactgatgagagaccacacaag
tgccatctctgtggcagggcattcagaacagtcaccctcctgaggaatcaccttaacaca
cacacaggtactcgtcctcacaagtgcccagactgtgacatggcctttgtaaccagtgga
gaattggtgcggcatcgtcgttataaacatacccacgagaagccatttaagtgttccatg
tgcgattatgccagtgtagaagttagcaaattaaaacgtcacattcgctctcatactgga
gagcggccgttccagtgcagtttgtgcagttatgctagcagggacacatacaagctgaaa
aggcacatgagaacccattcaggggaaaaaccttatgaatgttatatttgtcatgctcga
tttacccaaagtggtaccatgaagatgcacattttacaaaagcacacagaaaatgtggcc
aaatttcactgtcctcactgtgacactgtcatagcccgaaaaagtgatttaggtgtccac
ttgcgaaagcagcattcctatattgagcaaggcaagaagtgtcgttactgtgatgcggtg
ttccatgagcgctatgccctcatccagcatcagaagtcgcacaagaacgagaagcgcttt
aagtgcgaccagtgtgattacgcttgtagacaggagaggcacatgatcatgcacaagcgc
acccacactggggagaagccttacgcttgcagccactgcgacaagaccttccgccagaaa
cagctcctcgacatgcacttcaaacgctatcatgaccccaactttgtccctgcagccttc
gtctgttctaaatgtgggaaaacatttacacgtcggaataccatggcaaggcatgctgat
aattgtgctggtccagatggtgtagaaggggagaatggaggagaaacaaagaagagtaaa
cgtggaagaaaaagaaagatgcgctctaaaaaagaagattcctctgacagtgaaaacgct
gagccagatctggatgacaatgaggacgaggaggaacctgctgtagaaattgaacccgag
ccagagcctcagcctgtgaccccagccccaccacccgccaagaagcggagaggacggccc
cctggcagaaccaaccagcccaaacagaaccagccaacagccatcatccaagttgaagac
cagaatacaggtgcaattgagaacattatagtggaggtaaaaaaagagccagacgccgaa
cccacggagggtgaggaggaggaggcccagccagctgccacagatgcccccaacggcgac
ctcacgcctgagatgatcctcagcatgatggaccggtga
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integrated database retrieval system
