Oryctolagus cuniculus (rabbit): 100350694
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Entry
100350694 CDS
T03373
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocu03036
]
100350694
Chromosome and associated proteins [BR:
ocu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100350694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
ResIII
HTH_CHD1_Hrp3
DEAD
HDA2-3
MUN
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
100350694
NCBI-ProteinID:
XP_008272669
Ensembl:
ENSOCUG00000012394
LinkDB
All DBs
Position
4:6650721..6891977
Genome browser
AA seq
2717 aa
AA seq
DB search
MKIQKKEKQLSNLKVLNHSPMSDASVNFDFKSPSPFDCSTDQEDKIDGVARHCLPQKDLY
AAEEEADTLFPRKMTSHNGMEDSGGGGTGVKKKRKKKEPGEQAGTAKGSKDREPKPKRKR
EPKEPKEPRKAKEPKKAKEPKEPKQKDGAKKARRPREASGTKEAKEKRNCSDSTGRTKSK
KASKEQGPTPVEKKKKGKRKSETTVESLELDQGLPSSSLRSPEESTESADSQKRRSGRQV
KRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILASKT
VQEVHPGEPPFDLELFYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIF
TEPDEDLFNPDYVEVDRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAK
VKEFESLQVLPEIKHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNC
ILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHGS
QISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR
LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL
KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL
TKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDAPDFQLQAMIQAA
GKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAI
DRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAV
KVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKVEVEDLLRKGAYG
ALMDEEDEGSKFCEEDIDQILQRRTHTITIQSEGKGSTFAKASFVASGNRTDISLDDPNF
WQKWAKIAELDTEAKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTRS
RRLNDKARRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVYCV
KHYKGDEKIKSFIWELITPTKDGQAQTLQNHSGLSAPVPRGRKGKKTKNQLLLPELKNAD
WLATCNPEVVLHDDGYKKHLKQHCNKVLLRVRMLYYLKAEILGEAADKAFEGTPARDLDV
LLPDIDYVEIPVDWWDAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKSLSA
EQGVTDGTSDIPERGNMDKEDNTEDKLDGLQKQTESSSDGGDGICGEKKDDSRAAQDGSD
PDKSPWPASSALTARLRRLVTVYQRCNRKELCRPEIMGPGNQGYWVQEEMFRRSSEMDLI
NKDAQKRWTRREQADFYRTVSSFGVIYDQEKKTFDWTQFRIISRLDKKSDESLEHYFYSF
VAMCRSVCRLPVWKDGGPPDATIYVEPITEERAARTLYRIELLRKIREQVLTCPQLHERL
QLCRPSLYLPVWWECGKHDRDLLIGTARHGLNRTDYYIMNDPQLSFLDAYRNYAQHKRTN
TQAPGSLCCLYQTNSKLYESLTYTQRSRTSECLENEPENLVKIESRDDPLSLPGGSLPDV
TCENFLSKVQDVMSISHGESLLPESLENVMYSKKVLCRQPGSFQESPGTSAEPRKDAAAM
SVGTDGSCQPGRHEAEVAPSPSFMGSLEAGVAQMNIKDGKHLLMPVSKEGEPCCHEVGQR
PETIGQLDTKCLPSPSSDPGNESGLVDMCNLSVCDSKGNLSSDPQLIDVLENKSLASKLI
LGQNHSDEEEEEEENEEESLAVVAGMREMPPVLHLSEPSPNILREKSRGLHVDETQKGSL
EAGGQTPGPQRAFPSEACQCHCKHMERWARGLEHEEFEVEKPKTYNPDPYSINTSSISME
AEPTAVAPEPFQVTRGLLKEPWKESAEGKKGFPMYVPEGSDLKSEDLEFENKDDFDRDGA
CHSQDYPGKYSEEESKSSTSGIAGDTGDDVQEARAPTIAQLLQEKTLYSFSEWPKDRVII
NRLDNICHVVLKGKWPSSQQCEPSGTLPTPILPSSVGSRSSLSEPDAAEHSFSNGAALAA
QIQKESFLAPVFAKDEHKHRRPYEFEVERDAKARSLDQFSATHRHPPIVLNGWHGESAVD
LSCSSEGSPGATSPFPVSANTPKIGAIGSLQGALGMDLSGILQAGLIHPVTGQIINGSLR
RDDAASRRRRGRRKHAEAGMDLIFLKEQTLQAGILEVHEDPGQAALSTTHPEGPGPAASA
SEPAAVTNSQAEKALPSKSLLDWLRQQADCSLEVPGFGANFSDKPKQRRPRCKEPGKLDI
SSLSGEERVPAVPKEPGLRGFLPESKFNHTLAEPVLRDVGPRRRGRRPRGELLKAPAIVA
DSASGMGPLFMNGLIAGMDLVGLQNVRNVPGIPLTGLVGFPAGFATMPTGEEVKSTLSML
PMMLPGMAAVPQMFGVGGLLNAPMATTCASPAPASLSSTTNSGAATTEKTVEDKPGSHDV
KTDTLAEDKPGPSPFSDQSEPAITTSSPVAFNPFLIPGVSPGLIYPSMFLSPGMGMALPA
MQQARHSEIGALESQKRKKKKTKADSANPNPDPAPGAEREPGSHQNCPESSAPLPPEREH
VAQAGEGTLKDSSDDTN
NT seq
8154 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatacaaaagaaagagaagcagctgtcaaacttaaaagttctgaatcactcccca
atgtctgatgcctctgtcaattttgacttcaaatccccatccccgtttgactgcagcact
gatcaggaagacaagattgatggtgttgctaggcattgtctgccccagaaggacctgtat
gcagctgaagaggaagcagataccctttttcctaggaaaatgacatctcacaatgggatg
gaggacagtggaggagggggtaccggagtgaagaagaaacggaagaaaaaggagccagga
gagcaggcgggtactgcaaaaggaagcaaggatagggagcccaagccaaagaggaagcga
gaacctaaagaacccaaggaaccccggaaggccaaggagcccaagaaagccaaggagccc
aaggagccgaagcagaaggatggagctaagaaggctcggaggccccgggaggcctcgggc
accaaggaggccaaagagaagaggaactgctccgactccacaggcaggacaaagtccaag
aaggccagcaaggagcaaggaccaaccccagtggagaaaaagaagaaaggaaaaaggaaa
agtgaaaccacagtggagagtttagagctggatcagggcctgccgagctcgtccctgcgg
agtcctgaggagtccactgagtctgcagacagccagaaacgacgctcaggacgacaagtg
aagcgcagaaaatacaatgaggacctggacttcaaagtggtggatgacgatggagagaca
atcgctgttcttggagccggccgaacatctgcactctcagcgtctacactggcttggcag
gcagaggagcctccagaagatgatgcaaacatcattgagaagattctggcgtctaagact
gtccaggaggttcacccaggagaacccccattcgacttggagctattctacgtaaagtat
aggaatttttcctacttacactgcaaatgggccacaatggaagagctcgaaaaggatcct
cgcatcgcgcagaagatcaagcgatttcggaataaacaagcccagatgaagcacattttt
actgagcctgatgaagacttgttcaatccagactatgtggaagttgatcgcatcttggag
gtggcccacaccaaggatgcagaaacaggagaggaggtgacacattacctggtgaagtgg
tgctcactgccatacgaagaaagcacctgggagctagaggaagatgtggatcctgcaaaa
gttaaagaatttgaatctctccaagttctccctgaaatcaagcatgtggagcggcctgct
tcagactcctggcagaagctcgagaagtctcgcgagtataagaacagtaaccagctccgg
gagtaccagctggaggggatgaactggcttctttttaattggtataacaggaaaaactgt
attttggctgatgagatgggcttaggaaaaaccatccagtccatcacattcctttcagaa
atattcctcagaggaatccatggtccttttctcatcatcgcccctctctccaccatcact
aactgggagcgggagttccggacgtggacagagatgaatgccattgtctaccacggcagc
cagatcagcaggcagatgatccagcagtatgagatggtgtaccgagatgcacagggaaac
cccctttcaggagtcttcaagttccatgtcgtcatcacgacgtttgagatgatcctggca
gactgcccagagctgaagaagattcactggagttgtgtgatcatcgatgaagcccacaga
ctgaagaacaggaactgcaaacttctcgaaggtctaaagctcatggccctggaacataaa
gtgctgctcactggaacacccttgcagaactctgtggaggagctcttcagtttgctaaat
tttctggagccatcacagtttccttcagagactgctttcttggaggagttcggagatctg
aaaacagaggagcaggtaaagaaactgcagtctatcctaaaaccaatgatgcttcggcgg
ctgaaggatgatgtggaaaagaacctagctcccaagcaggagaccatcattgaagtagaa
ctgaccaatatccagaagaagtactaccgggccatcctggagaagaacttctcctttctg
accaagggcgccaatcagcacaacatgcccaatctcatcaacacaatgatggagctgaga
aagtgctgtaatcacccctacctgatcaatggggcagaggaaaaaattctggaagatttc
cgaaaaacccacagccctgatgcccctgacttccagctccaggccatgattcaggcagca
gggaagctggtgctgattgacaagctgctccctaagctgatcgcggggggccacaaagtg
ctcattttctcccagatggtgcgctgcctcgacatcctggaggattacctcatccagaga
agatacacctatgagcgaattgatgggcgagtacggggaaacctgcgccaggcagccatc
gaccggttctgtaagccagactcagaccgctttgtctttcttctgtgcaccagagcggga
ggcctggggatcaatctcacagctgctgatacctgcatcatatttgattctgactggaac
ccacaaaatgacttgcaggctcaggcccgctgtcaccgcataggccagagtaaagccgtg
aaggtctatcgcctcatcacccggaactcctatgagcgagaaatgtttgacaaggccagc
ctaaagctgggtctggacaaggcagttcttcaggacatcaaccgaaagggcagcaccaat
ggagtacagcagctctcaaaagtggaggtggaggacctgctccggaagggtgcttatgga
gccttgatggacgaggaagacgaaggctccaagttctgtgaagaagacatagaccagatt
ctgcagaggagaacccacaccatcaccatccagtctgaggggaaagggtccacctttgcc
aaggctagctttgtggcttcaggaaacagaacagacatttccttagatgatcctaacttt
tggcagaaatgggctaaaatagctgaactggacactgaagcaaagaatgaaaaggaaagc
ttagtgatcgaccgccctcgtgtgagaaagcagaccaaacactacaactcgtttgaggag
gatgagctcatggagttttcagagttagacagtgactcggatgaaaggcccacgagatcc
aggcgcctcaatgacaaagccaggcgctacctccgagctgagtgcttccgggtagagaag
aacctgctcatctttggctggggccgttggaaggacatcctgactcatgggcgattcaag
tggcatctgaacgagaaggacatggagatgatttgccgggccctgctggtgtactgtgtc
aagcattacaagggggacgagaagatcaagagtttcatctgggagctgatcacacccacc
aaagacggacaggcccagaccctgcagaaccactcagggttgtctgctccagtccctaga
gggaggaaggggaagaagacaaagaaccagctgctgcttccggaactgaagaacgcagac
tggctggccacgtgcaatcccgaggtggtcctgcatgacgacggctacaagaaacacctc
aaacaacactgcaacaaggtacttttgcgagtccggatgctatactacctgaaagctgaa
atactgggagaagcagctgataaagcatttgaaggaactcctgccagggacctggacgtg
cttctgcccgacattgactatgtggagatcccagtggactggtgggatgctgaggccgat
aagtctcttctcattggtgtgttcaagcacggttatgagaggtacaatgccatgcgagca
gacccagcactctgctttctggagaaagttgggatgccagacgagaagtccctttctgca
gaacagggtgtcacagatggcacctcagacatccccgaaagaggcaacatggacaaagaa
gacaatactgaggacaaattagatggcctccagaaacaaacggagagttccagtgatgga
ggcgatggcatttgtggtgaaaagaaggatgacagccgggcagcccaggatggctccgac
ccagacaaatcaccctggccagcctcatccgccctcacagctcgtctcagacgactggtc
accgtttaccagcgctgtaaccgcaaggaactctgccgacctgagattatgggaccaggt
aaccaaggatactgggttcaggaagagatgttcaggagaagctcagaaatggacctcatc
aacaaggatgcccagaagaggtggacaaggagagagcaggctgacttttaccgaacagtg
tcttcctttggtgtcatttatgatcaagaaaaaaaaacctttgactggacacagttccgc
ataatttcccggttggacaagaagtcggatgagagcctggaacactatttctacagtttc
gtggccatgtgccggagtgtctgtcgtctgcccgtgtggaaagatggtggtccccctgac
gccaccatctacgttgaacccatcaccgaggagcgggctgcaaggactctgtaccgcatc
gagctgttacggaagatccgagagcaggtgctcacgtgtcctcagctgcacgagcgtctc
cagctctgcaggcccagcctctacctcccggtctggtgggagtgtgggaagcacgatcgc
gacctgctcatcggcaccgccagacacgggctaaaccgcaccgactattacatcatgaac
gacccccagctgtccttcctggacgcctatagaaactatgcccagcataaaagaaccaac
acccaggcaccaggcagtctctgctgtctttaccagaccaacagcaaactgtatgaatcc
cttacctatactcagaggagcaggacttcagaatgccttgaaaatgaacctgagaatcta
gtgaaaatagaaagcagagatgaccctctcagtctgcctgggggcagcttacctgatgta
acctgtgaaaactttctctctaaagttcaggatgtcatgtccatcagccacggcgaaagt
ctgctgcccgagtccttggagaacgtgatgtacagtaagaaggtgctctgccgccagcca
ggctcttttcaggaaagtccaggcaccagtgcagaacccaggaaggatgctgctgccatg
tccgtgggcacagacgggagctgccagcctggccgccacgaggcagaagtggctcccagc
ccctcttttatgggtagcctagaagcaggagtagctcagatgaacattaaagatggaaaa
catctgctgatgcctgtttcaaaggaaggggagccgtgctgccatgaagtgggacagagg
cctgaaaccatcgggcagttagacaccaaatgcttaccttcgccgtcctctgatccagga
aatgaaagtgggcttgtagacatgtgcaaccttagtgtctgtgactccaaaggaaacctg
tcgtcggatccgcaattaattgatgtattagaaaacaaaagtttagcaagtaaactgatt
ctgggtcagaaccacagtgatgaggaggaggaagaggaggaaaatgaggaggaaagcttg
gctgtggtagcaggcatgagggaaatgccaccggttttgcatctctctgagccttctcca
aatatcctaagggaaaagagccgaggcctccacgtggatgaaacacagaaaggaagcctg
gaggcaggaggccagactcctggaccacagagggcctttccctcggaagcctgtcagtgt
cactgcaagcacatggagaggtgggcacggggcctcgagcatgaggaatttgaagtagaa
aaacccaagacttataacccggacccctacagcatcaacaccagtagtatctcgatggaa
gctgaacccactgctgttgcaccagagccgtttcaagtgacgcgtgggcttttaaaagaa
ccttggaaggaaagtgcagagggaaaaaaaggtttccccatgtatgttcccgaaggaagt
gacctcaagtcagaagacctggagtttgagaataaagatgattttgatagagatggagcc
tgccatagccaagattacccagggaaatactctgaagaggagagcaagagctcgacctcg
ggcattgcgggagatacgggggatgacgtgcaggaagctcgtgctcccaccattgcccag
ctgctccaggagaaaaccctctactccttctcagagtggccaaaggatcgcgtgataatt
aaccggctggataatatttgccacgtggtgttgaaggggaagtggccctccagccagcag
tgtgagccctcaggcacactgcccacccccatcttacccagcagcgtgggttctcgaagc
agcctctcagaaccagacgcagcagaacacagcttcagcaatggggcggcactggcggcc
cagatccagaaggagagtttcttagctccggtcttcgcaaaggatgaacacaagcacaga
cggccctatgagtttgaggtggagagggatgccaaagctcggagcctggatcagttctct
gccacccacaggcacccccctattgtcctcaatggctggcatggggagtcagctgtagac
ctctcctgctcatcagaagggtccccaggagccacatctcccttcccagtgagtgccaac
actccaaagatcggggctatcggttcacttcaaggagcccttggcatggacttgtctggg
attctgcaggctggcctgatccatccagtgacagggcagatcatcaacggaagcctcaga
agagatgatgctgcctcgaggaggcgaaggggcaggcggaaacacgccgaagcgggcatg
gacctcatctttctgaaggaacagacactgcaggcagggatcttggaagtccatgaagac
cccgggcaggctgccctgagcaccacacaccctgaagggccaggacctgctgcctctgcc
tccgagccagctgcagtgaccaacagccaggccgagaaggcccttcccagcaagagtctg
ctggactggctgaggcaacaagcagactgctccttagaagttcccggctttggggcgaat
ttttcagacaaaccaaagcaaaggaggcctcgctgtaaagaacctggaaaactagacatc
agctctctgagtggggaagagagggttccagctgtccccaaggagccaggactgaggggg
tttctcccagaaagcaagttcaaccacaccctggctgagcctgttcttcgggatgtgggc
ccccgcaggagggggaggcggccccggggcgaactcctgaaggctccagccatcgtggca
gactctgcctccggaatggggccgctgttcatgaacgggctgattgcggggatggacctg
gtaggcctgcagaacgtaagaaatgtgccaggcatccccctcaccgggctcgtgggcttc
ccagccggcttcgccaccatgcccaccggcgaagaagtcaaaagcaccctgagcatgctg
cctatgatgctgccgggcatggccgcagtgccccagatgttcggggtggggggactcctc
aacgcacccatggcgaccacctgtgcatcccctgccccagcgtctctgtcaagcacaacg
aacagtggcgcggccaccactgaaaagactgtggaggacaagccaggcagccacgacgtg
aaaacagacaccttagccgaagacaagcctggtcctagtccattttctgatcagtctgaa
cctgcaataactaccagtagtcccgtggcttttaacccgtttctcatcccgggggtctct
cctggactcatttacccatccatgttcttgtcccctggcatgggcatggctctgccagcc
atgcagcaggccagacactcggaaataggggctctggagagccagaagcggaagaagaag
aaaaccaaggcggacagcgcgaaccccaacccagaccctgctcccggggccgagagggag
ccaggcagccaccagaactgccccgaatccagcgccccgctgcccccagagagagaacat
gtggcacaggctggggaggggacactcaaagactccagcgacgacaccaactag
DBGET
integrated database retrieval system
