Oryctolagus cuniculus (rabbit): 100350851
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Entry
100350851 CDS
T03373
Name
(RefSeq) protocadherin-11 X-linked isoform X5
KO
K16498
protocadherin delta 1
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
100350851
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ocu01009
]
100350851
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocu04515
]
100350851
Protein phosphatases and associated proteins [BR:
ocu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100350851
Cell adhesion molecules [BR:
ocu04515
]
Cadherins
Protocadherins
100350851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
DUF6377
Motif
Other DBs
NCBI-GeneID:
100350851
NCBI-ProteinID:
XP_002720200
Ensembl:
ENSOCUG00000003437
UniProt:
A0A5F9DQS9
LinkDB
All DBs
Position
X:83573744..84327780
Genome browser
AA seq
1350 aa
AA seq
DB search
MDLLSGTYIFAVLLACVVFQSGAQEKNYTVREEMPENVLIGDLLKDLNLSLIPDKSLTSP
MQFKLVYKTGDVPLIRIEEGTGEIFTTGARIDREKLCAGIMLDARCFYEVEVAVLPDEIF
RLVKIRFLIEDINDNAPLFPATVINISIPENSAINSRYALPAAVDPDIGINGVQNYQLIK
GQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVA
DTNDNRPVFKENEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFYFSNLVSNIAKRLF
HLNTTTGLITVKEPLDREEAPSHKLLVLATDGGSMPARAMVLVNVTDINDNVPSIDIRYI
INPTNGTVVLSENAPLNTKVALITVTDKDADHNGRVTCFTDHEVPFRLRPVFSNQFLLET
AAYLDYESTREYAIKLLAADAGKPPLNQSSMLLVKVKDENDNAPVFTQPFISISVPENNS
PGTQLTKISATDADSGRNAEINYLLGTDAPPEFNLDHRTGILTAVKKLDREKQEKYYFTV
LAKDNGIPPLITNATVLVTVLDQNDNSPIFTHNEYNFYVPENLPRHGTVGLITVTDPDYG
ENSAVTLSIVDVNDEFTIDPQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSTAKVT
INVVDVNDNKPVFVIPPSNYSYELVLPSTNPGAVVFQVVAVDNDTGMNAEIRYSIAGGNA
KGLFIIDQTSGNITLKEKCVVADLGLHRLVVKAKDLGQPDSLFNVIVVNLFVNESVTNAT
LINELVHKSIETPVTQNVETADASSPTSDYVKIMVAIVAGTITVILVIFITAVVRCRQAP
HLKAAQKNKQNSEWVTPNPENRQMIMMKKKKKKKKKNAPKNLLLNFVTIEEAKADDADND
GNSVTLDLPIELEEQTMGKYNWGTTPTTFKPDSPDLARHYKSASPQPTFQIQPETPLNSK
HHIIQELPLDNTFVACDSISKCSSSSSDPYSVSECSYPVTTFKAPVSVHTRPPMKEAVRS
HTPMKESTTVEIWTHPQPQRKSEGKKAGKSQRRVTFHLPEGSQESSSDGGLGDHDASSLP
STAHALPLGYPQEEYFDHATPNNRTEGDGNSDPESTFIPGLKKAAEITVQPTVEEASDNC
THECLILGHSDSCWMPASLTHSSPSQGQASTLCRSPPLTQSTLRRRSPPVTQTIALCHSP
PVTQAIALCHSPPPVQASALHHSPPLAQATALCHSPPAAQGSALRYSPPLAQAVPIRRSP
PLPQAATLHRNQAQPPMAMQQGWVQGAGADGLRSLDQSVQGSTRAQFYTMSERIHHSDDS
IKVIPLTTFTPGQQARPSRGDSPIMEEHPL
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atggacttgttgtccgggacgtatatatttgcggtcctgttagcatgcgtcgtgtttcag
tctggcgcccaggagaagaactacacggtccgagaagaaatgccagaaaacgtcctgata
ggcgacttgttgaaagacctcaacttgtcgcttattccagacaagtccttgacatcgcca
atgcagttcaaactagtctacaagacaggagatgtgccactgattcggattgaagagggc
actggtgaaatcttcactactggcgctcgcatcgatcgtgagaaattatgtgccggtatc
atgctggatgcccgttgcttttatgaagtggaggttgccgttttgccggatgaaatattt
agactggttaagatacgttttctgatagaggacataaatgacaatgcaccattattcccg
gcaacggttatcaacatatcaattccagagaattcggctataaactctcgatatgctctc
ccagcggcagttgatcctgatatcggaataaatggagttcaaaattaccaactaattaag
ggtcaaaatatttttgggcttgatgtcattgaaacaccagaaggagacaagatgccacaa
ctgattgttcaaaaggaattagatagggaagagaaggatacctatgtgatgaaagtaaag
gttgaagatggtggctttcctcaaagatccagtaccgctatcttgcaagtaagtgttgct
gatacaaatgacaaccgcccagtcttcaaggaaaatgagattgaagtcagtatacctgaa
aatgctcctgtaggtacttcagtgacacagctccatgctacagatgctgacataggtgaa
aatgccaagattcatttctatttcagcaatctagtctccaacattgccaagagactgttt
catctcaacacgaccactggacttatcacagtcaaagaaccactggatagggaagaagca
ccaagccacaagttactggttttggcaactgatggtggatcaatgccagcaagagcaatg
gtattggtaaacgttacagatatcaatgataatgtcccatcgattgacataagatacatc
atcaatccaacaaatggcaccgtggttctttcagaaaatgccccactcaataccaaagtt
gctctcataactgtgacagataaggatgctgaccataatggtagggtgacgtgtttcaca
gatcatgaagtccctttcagattaagaccagtatttagtaatcagttcctcctggagact
gctgcatatcttgactatgagtccactagagaatatgccattaaattgttggctgcggat
gctggcaaacctcctttgaatcagtcatccatgctcctcgtcaaagtgaaagatgaaaat
gacaatgctccagttttcacccagcctttcataagtatttctgttcctgaaaataactct
cctggcactcagttgacaaaaataagtgcaaccgatgcagacagtgggcggaatgctgag
atcaattacctgctgggcactgatgctccacctgaattcaatctggatcatcgtacaggc
attctgactgcagtaaagaaactagatagagaaaaacaggaaaaatattacttcacagtt
ctggcaaaagataatggcattccacccttaataactaatgccacagtcttagtgactgtt
cttgatcagaatgataacagcccaattttcactcacaatgagtacaacttctatgtccca
gaaaacctcccaagacatggcacagtgggactcatcactgtaactgatcctgactatgga
gagaattctgcagtcactctctccattgtagatgtgaatgatgagttcaccattgatcca
cagactggtgtcatccgaccaaatatctcatttgatagagaaaagcaagagtcttacact
ttctatgtaaaagctgaggatggtggtagggtatcacgctcttcaactgccaaagtaacc
attaatgtggttgatgtcaatgacaacaaaccagtttttgttatccctccttccaactac
tcctatgaattggttctaccatctactaatccaggagcagtggtctttcaggtagttgct
gttgacaatgatactggcatgaatgcagaaattcgttacagcattgcagggggaaacgca
aagggtctgtttataattgaccaaacatcaggaaatatcacactgaaagagaaatgtgtt
gttgctgaccttggtttacacagattggtagtaaaagctaaggacttaggacaacctgat
tccctcttcaatgttatagttgtcaatctgttcgtgaatgaatcagtgaccaatgctaca
ctgattaatgaattggtgcacaaaagcattgaaacaccagtgacacaaaatgttgagaca
gctgatgcatcctcaccaaccagtgactatgtcaagatcatggttgccattgttgctggc
accataactgtcatcctagttattttcatcactgctgtcgtaagatgtcgccaagcacca
catcttaaggctgctcagaaaaacaaacagaattctgaatgggttaccccaaacccagaa
aacagacagatgataatgatgaagaaaaagaagaagaagaagaagaagaatgcccctaag
aacttgctgcttaactttgtcactattgaagaagcaaaggcagatgatgctgacaatgat
ggaaacagtgtcacacttgaccttcccattgagctggaagagcaaaccatgggcaagtac
aactggggcacaacacctaccacattcaagcctgacagccctgatttggcccgacactac
aaatctgcctctccacagccgaccttccagatccagcctgagacgcccctgaattctaag
caccacatcattcaggaactgcctctcgataacacctttgtggcctgtgattccatctcc
aagtgctcctccagcagttctgatccctacagcgtttctgagtgcagctatccggtgaca
accttcaaggcccctgtgtctgtacacaccagaccgccaatgaaggaggctgtgagatct
catacccccatgaaagagtcaacaactgtagagatctggactcatcctcaaccacagcgg
aaatccgaggggaaaaaggcaggaaagtctcagcgacgtgtcacatttcacctaccagaa
ggctctcaggaaagcagcagtgatggaggactgggcgaccatgatgcaagcagccttccc
agcacagcccatgccctgcctctgggctatcctcaggaggaatactttgatcatgccaca
cccaacaaccgcactgaaggggatgggaactctgatcctgaatctactttcattcctgga
ctaaagaaagctgcagaaataactgtccaaccaactgtggaagaggcctctgacaactgt
acccatgaatgtctcatcttgggccattctgattcttgctggatgccagcttctctgacc
cattccagtccatcacaaggacaagcctctactctctgccgtagcccacccctgacacag
tccactcttcgccgccgcagccctccggtcacacagaccattgctctctgccacagccct
cctgtgacccaggccattgcactgtgccacagtcctccaccagtgcaggcctctgctctc
caccacagtccacctctagcacaggctactgcactttgccacagcccaccagcagcacag
ggctcagccctccgctatagccctcccctggcacaagctgttccaatccgccgtagcccc
cctctgccacaggctgctactctccatcgcaaccaagcccaaccaccgatggctatgcag
caaggctgggtgcagggggctggggctgatggactgcgttctcttgatcagagcgtgcaa
ggtagtacaagagctcagttttataccatgtctgaaagaattcatcacagtgatgattca
attaaggtcattccactgacaaccttcactccaggccaacaggccagaccctctaggggt
gactcccccattatggaagagcatccattataa
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