Oryctolagus cuniculus (rabbit): 100350883
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Entry
100350883 CDS
T03373
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03082
ATP-dependent chromatin remodeling
ocu03250
Viral life cycle - HIV-1
ocu04714
Thermogenesis
ocu05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100350883
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100350883
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100350883
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100350883
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ocu01009
]
100350883
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocu03021
]
100350883
03036 Chromosome and associated proteins [BR:
ocu03036
]
100350883
Protein phosphatases and associated proteins [BR:
ocu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100350883
Transcription machinery [BR:
ocu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100350883
SWI/SNF complex
100350883
Chromosome and associated proteins [BR:
ocu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100350883
PBAF complex
100350883
SWI/SNF complex
100350883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
100350883
NCBI-ProteinID:
XP_008251217
LinkDB
All DBs
Position
Unknown
AA seq
376 aa
AA seq
DB search
MMMMALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEER
KKIVASSHDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKRNS
QWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENASQPEVLVPI
RLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASAIRQQIESYP
TDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGLGGEFVT
TIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQD
RNTRRMRRLANTAPAW
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggcgctgagcaagaccttcgggcagaagcccgtcaagttccagctggag
gacgacggcgagttctacatgatcggctccgaggtgggaaactacctccgtatgttccga
ggttctctgtacaagagatacccctcgctctggaggcgactagccactgtggaagagagg
aagaaaatagttgcatcgtcacatgatcatgggtatacgacccttgctaccagcgtgact
ctgctaaaagcctcagaggtggaagagatcctggacggcaacgatgagaagtacaaggct
gtgtccatcagcacggagccccccacctacctcagggaacagaaggccaagaggaacagc
cagtgggtgcccaccctgcccaacagctcccaccacctggacgccgtgccgtgctccacc
accatcaacaggaaccgcatgggccgggacaagaagagaaccttccccctctgctttgat
gaccacgacccagctgtgatccacgagaacgcatcccagcctgaggtgctcgtccccatc
cgcctggacatggagattgacgggcagaagctgcgggacgccttcacctggaacatgaat
gagaagctgatgacccccgagatgttttcagaaatcctctgtgacgacctggatctgaac
ccactgacgttcgtgccggccatcgcctccgccatcagacagcagatcgagtcctacccc
acggacagcatcctggaggaccagtcagaccagcgtgtcatcatcaagctgaacatccac
gtgggaaacatctccctggtggaccagtttgagtgggacatgtcggagaaggagaactcg
ccagagaagtttgccctgaagctgtgctcggagctggggctaggcggggagtttgtcacc
accatcgcatacagcatccggggacagctgagctggcatcagaagacctacgccttcagc
gagaaccccctgcccacagtggagattgccatccggaacacaggcgacgctgaccagtgg
tgcccactgctggagaccttgactgacgccgagatggagaagaagatccgcgaccaggac
aggaacacgaggcggatgaggcgtctggccaacactgccccagcctggtga
DBGET
integrated database retrieval system
