KEGG   Oryctolagus cuniculus (rabbit): 100351027
Entry
100351027         CDS       T03373                                 
Name
(RefSeq) neurofascin isoform X1
  KO
K06757  neurofascin
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    100351027
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ocu04515]
    100351027
Cell adhesion molecules [BR:ocu04515]
 Immunoglobulin superfamily
  L1 family
   100351027
SSDB
Motif
Pfam: Ig_3 I-set fn3 Ig_2 ig Bravo_FIGEY V-set Ig_DSCAM-DSCAML_C Ig_5 V-set_CD47 C2-set_2 Ig_VEGFR-1-like_5th BiPBP_C DUF4998
Other DBs
NCBI-GeneID: 100351027
NCBI-ProteinID: XP_051677161
Ensembl: ENSOCUG00000015363
LinkDB
Position
16:18233072..18412040
AA seq 1468 aa
MRRLAARGAAGDAGGVAAPAVDRSDCARGRSPRPRRLIDLCALGDPGVSLPSADRARASA
GVARRGLNEAEKLSSVQEAQLERLKAARPRGPGSRERGLVPRMARPQPPPWVHAAFLLCV
LGLGGAIEIPMDPSIQNELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRN
SRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSK
SPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLY
FSNVILQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYNDSSLRNHPDMYSARGVAE
RTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKAL
RITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLVLAPGEDGRLVCRAN
GNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANA
FVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVH
ENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQL
ECRVKHDPSLKLTVSWLKDEEPLYISNRMKKEDDSLTIFGVAEKDQGSYTCVASTELDQD
LAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDY
VVQFEEDQFQPGVWHDHSKFPGNVNSAVLQLSPYVNYQFRVIAINEVGSSHPSLPSERYR
TSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRDAWNNATV
WGSRYVVGQTPVYVPYEIRVQAENDFGKAPEPETVIGYSGEDYPRAAPTDVKVRVMNSTA
ISLQWNRVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVSQLFPY
SNYKLEMVVVNGRGDGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGI
LVGYTLKYLPFNGTKLGKQIVENFSPNQTKFTVQRADPVSRYRFTLSARTQVGSGEAVTE
ESPAPPNEATPTAAPPTLPPTTAGATGAVSSTDATAIGTTTEATEAPTVPTAAPTTIATT
TTVATTTTTTVATTTESPPATTTRTKIQESAHPPAPDEQSIWNVTVLPNSKWANITWKHN
FGPGTDFVVEYIDSNHTKKTVPVKAQAQPIQLTDLYPGMTYTLRVYSRDHEGISSTVITF
MTSTAYTNNQADIATQGWFIGLMCAIALLVLILLIVCFIKRSRGGKYPVREKKDVPLGPE
DPKEEDGSFDYSDEDNKPLQGSQTSLDGTIKQQESDDSLVDYGEGGEGQFNEDGSFIGQY
TVKKDKEETEGNESSEATSPVNAIYSLA
NT seq 4407 nt   +upstreamnt  +downstreamnt
atgcggcggctggcggcgagaggcgctgcaggcgacgcgggcggagtggcggcgccggcc
gtggaccgctcggactgcgcccggggccggagcccgagaccgcggaggttgattgactta
tgtgcacttggggaccctggagtctcccttccctccgcagaccgggccagagcctccgct
ggtgttgcaaggagggggctgaatgaggcagagaagctgagctctgtccaggaggcccag
ctggagcggctcaaggcggcaagaccccgagggccggggagcagggagcggggcctggtg
ccgaggatggccaggccgcagccgccgccctgggtccacgcagccttcctcctctgcgtc
ctcggacttggtggagccatcgagattcccatggacccaagcattcagaatgagctgacc
cagcctccgaccatcaccaagcagtcagtgaaggaccacatcgtggacccccgggacaac
atcctgatcgagtgtgaagccaagggcaaccccgcccccagcttccactggacgcgcaac
agcaggttcttcaacatcgccaaggacccccgcgtgtccatgcggcggcggtcggggacg
ctggtgattgacttccgcagcggggggcggcccgaggagtacgagggcgagtaccagtgc
tttgcccgcaacaaatttggcacggccctgtccaacaggatccgtctgcaggtgtccaaa
tctcctctgtggcccaaagaaaacctggaccccgttgtggttcaagaaggcgcccccctg
acactccagtgcaaccccccgccaggacttccgtccccggtcatcttctggatgagcagc
tccatggagcccatcacccaagacaagcgtgtgtcccagggccacaacggagacctgtat
ttctctaacgtgatactgcaggacatgcaaaccgactacagctgcaacgcccgcttccac
ttcacccacaccatccagcagaagaaccccttcaccctcaaggtcctcaccaaccacccc
tataacgactcgtccttacgaaaccaccctgacatgtacagtgcccgaggagtcgcggaa
aggacccccagcttcatgtacccccagggcacctcgagcagccagatggtgctacgcggc
atggacctgctgctggagtgcatcgcctccggggtccccacaccagacattgcatggtac
aagaaaggcggggacctcccctcggacaaggccaagtttgagaactttaacaaggccctg
cgcatcaccaacgtctccgaggaagactccggcgagtatttctgcctggcctccaacaag
atgggcagcatccggcacacgatctcggtgagagtaaaggctgctccctactggctggat
gaacccaagaacttggtcctggctccgggcgaggatgggaggctggtgtgtcgcgccaat
gggaaccccaagcccactgtgcagtggatggtgaacggggagcccttgcagtcggcaccg
cccaacccgaaccgcgaggtggccggcgacaccatcatcttccgggacacgcagatcagc
agcagggccgtgtaccagtgcaacacctccaacgagcacggctacctgctggccaacgcc
ttcgtcagcgtgctggacgtgccaccgcggatgctgtcaccccggaaccagctcatcaga
gtgatcctgtacaaccgcacccggctggactgcccgttcttcgggtctcccatccccacg
ctccgatggtttaagaatgggcaggggagcaacctggacggcggcaactaccacgtgcac
gagaacggcagcctggagatcaagatgatccgcaaggaggaccagggcatctacacctgc
gtcgccaccaacatcctgggcaaagccgagaaccaggtccgcctggaggtcaaagacccc
accaggatctaccggatgccagaggaccaggtggccaaaaggggcaccacggtgcagctg
gagtgccgtgtgaaacacgacccctccctgaaactcaccgtgtcctggctgaaggacgag
gagccgctgtacatcagcaacaggatgaagaaggaggatgactcgctgaccatcttcggg
gtggctgagaaggaccaaggcagttacacgtgcgtcgccagcactgagctggaccaggac
ctggccaaggcctacctcaccgtgctagctgatcaggccactccaactaaccgtttggct
gccctgcccaaagggcggccagaccggccccgagacctggagctcaccgacctggccgag
cggagcgtgaggctgacctggatcccgggggacgccaacaacagccccatcacagactac
gtagtccagtttgaagaggaccagttccagccgggggtctggcatgaccattccaagttc
ccaggcaatgtcaactcggctgtcctgcagctgtccccgtacgtcaactaccagttccgg
gtcatcgccatcaacgaggtcggcagcagccaccccagcctcccgtcagagcgctaccga
accagtggggcaccccctgagtccaaccccggtgacgtgaagggagaggggaccaggaag
aacaacatggagatcacgtggacgcccatgaacgccacctccgcctttggccccaacctg
cgctacatcgtgaagtggcggcggagagagactcgcgacgcctggaacaacgccaccgtg
tggggctctcgctacgtggtggggcagaccccggtctatgtgccctacgagatccgagtg
caggccgaaaatgactttgggaaggcccccgagccagagacggtcatcggttactccggg
gaggactatccccgggctgcacccaccgacgtcaaggtccgagtcatgaacagcacagcc
atcagcctgcagtggaaccgtgtctactcggacacggtgcagggccagctcagagagtac
cgagcctactactggagggagagcagcttgctgaagaacctgtgggtgtctcagaagaga
cagcaagccagcttccccggggaccgcccccggggcgtggtgtcccaactcttcccctac
agcaactacaagctggagatggtggtggtcaatggcagaggcgatgggcctcgcagtgag
accaaggagttcaccaccccggagggagttcccagcgcccccagacgtttccgagtccgg
cagcccaacctggagacaatcaacctggagtgggaccacccggagcaccccaacggcatc
ctggttggatacacactcaaatacctgccctttaacggaaccaaactggggaagcagata
gtggaaaacttctctccgaatcagaccaagttcacggtgcagagggcggatcccgtgtca
cgttaccgtttcacgctcagcgccaggacgcaggtgggctctggggaagcagtcacagag
gagtcacctgcaccccctaacgaagctactccaacggcagctcctcccacgttgcccccg
actactgcgggtgccacgggcgccgtgagcagtactgacgctactgccattggcaccacc
accgaagccacagaagcccccaccgtcccaaccgccgcacctaccaccatcgccaccacc
accactgtcgccacaactactacaaccaccgtcgccaccaccacggagagtcctcctgcc
accaccaccaggactaagatccaggaatccgcccatccgccagcccccgacgagcagtcc
atatggaacgtcacagtgctccccaacagtaaatgggccaacatcacctggaagcacaat
ttcgggcccggaactgactttgtggttgagtacattgacagcaaccatacgaaaaaaact
gtccctgttaaggcccaggcccagcccatacagctgacagacctctatcccgggatgacg
tacacgttgcgggtctattcccgggaccacgagggcatcagcagtaccgtcatcaccttt
atgaccagtacagcttacaccaacaaccaggccgacatcgccacacagggctggttcatc
gggctcatgtgcgccatcgccctcctggtgctgatcctgctcatcgtctgtttcatcaag
aggagtcgtggtggcaagtacccagtgcgagagaagaaagatgttccccttggccccgag
gaccccaaagaagaggacggctcctttgactacagtgacgaggacaacaagcctctgcaa
ggcagccagacgtcgctggacggcaccatcaaacagcaggagagcgacgacagcctggtg
gactacggcgagggcggggagggccagttcaacgaggacggctccttcatcgggcagtac
acggtcaagaaggacaaggaggagacggagggcaacgagagctcagaggccacgtccccc
gtcaacgccatctactccctggcctaa

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