Oryctolagus cuniculus (rabbit): 100351027
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Entry
100351027 CDS
T03373
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100351027
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocu04515
]
100351027
Cell adhesion molecules [BR:
ocu04515
]
Immunoglobulin superfamily
L1 family
100351027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
Ig_5
V-set_CD47
C2-set_2
Ig_VEGFR-1-like_5th
BiPBP_C
DUF4998
Motif
Other DBs
NCBI-GeneID:
100351027
NCBI-ProteinID:
XP_051677161
Ensembl:
ENSOCUG00000015363
LinkDB
All DBs
Position
16:18233072..18412040
Genome browser
AA seq
1468 aa
AA seq
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MRRLAARGAAGDAGGVAAPAVDRSDCARGRSPRPRRLIDLCALGDPGVSLPSADRARASA
GVARRGLNEAEKLSSVQEAQLERLKAARPRGPGSRERGLVPRMARPQPPPWVHAAFLLCV
LGLGGAIEIPMDPSIQNELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRN
SRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSK
SPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLY
FSNVILQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYNDSSLRNHPDMYSARGVAE
RTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKAL
RITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLVLAPGEDGRLVCRAN
GNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANA
FVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVH
ENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQL
ECRVKHDPSLKLTVSWLKDEEPLYISNRMKKEDDSLTIFGVAEKDQGSYTCVASTELDQD
LAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDY
VVQFEEDQFQPGVWHDHSKFPGNVNSAVLQLSPYVNYQFRVIAINEVGSSHPSLPSERYR
TSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRDAWNNATV
WGSRYVVGQTPVYVPYEIRVQAENDFGKAPEPETVIGYSGEDYPRAAPTDVKVRVMNSTA
ISLQWNRVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVSQLFPY
SNYKLEMVVVNGRGDGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGI
LVGYTLKYLPFNGTKLGKQIVENFSPNQTKFTVQRADPVSRYRFTLSARTQVGSGEAVTE
ESPAPPNEATPTAAPPTLPPTTAGATGAVSSTDATAIGTTTEATEAPTVPTAAPTTIATT
TTVATTTTTTVATTTESPPATTTRTKIQESAHPPAPDEQSIWNVTVLPNSKWANITWKHN
FGPGTDFVVEYIDSNHTKKTVPVKAQAQPIQLTDLYPGMTYTLRVYSRDHEGISSTVITF
MTSTAYTNNQADIATQGWFIGLMCAIALLVLILLIVCFIKRSRGGKYPVREKKDVPLGPE
DPKEEDGSFDYSDEDNKPLQGSQTSLDGTIKQQESDDSLVDYGEGGEGQFNEDGSFIGQY
TVKKDKEETEGNESSEATSPVNAIYSLA
NT seq
4407 nt
NT seq
+upstream
nt +downstream
nt
atgcggcggctggcggcgagaggcgctgcaggcgacgcgggcggagtggcggcgccggcc
gtggaccgctcggactgcgcccggggccggagcccgagaccgcggaggttgattgactta
tgtgcacttggggaccctggagtctcccttccctccgcagaccgggccagagcctccgct
ggtgttgcaaggagggggctgaatgaggcagagaagctgagctctgtccaggaggcccag
ctggagcggctcaaggcggcaagaccccgagggccggggagcagggagcggggcctggtg
ccgaggatggccaggccgcagccgccgccctgggtccacgcagccttcctcctctgcgtc
ctcggacttggtggagccatcgagattcccatggacccaagcattcagaatgagctgacc
cagcctccgaccatcaccaagcagtcagtgaaggaccacatcgtggacccccgggacaac
atcctgatcgagtgtgaagccaagggcaaccccgcccccagcttccactggacgcgcaac
agcaggttcttcaacatcgccaaggacccccgcgtgtccatgcggcggcggtcggggacg
ctggtgattgacttccgcagcggggggcggcccgaggagtacgagggcgagtaccagtgc
tttgcccgcaacaaatttggcacggccctgtccaacaggatccgtctgcaggtgtccaaa
tctcctctgtggcccaaagaaaacctggaccccgttgtggttcaagaaggcgcccccctg
acactccagtgcaaccccccgccaggacttccgtccccggtcatcttctggatgagcagc
tccatggagcccatcacccaagacaagcgtgtgtcccagggccacaacggagacctgtat
ttctctaacgtgatactgcaggacatgcaaaccgactacagctgcaacgcccgcttccac
ttcacccacaccatccagcagaagaaccccttcaccctcaaggtcctcaccaaccacccc
tataacgactcgtccttacgaaaccaccctgacatgtacagtgcccgaggagtcgcggaa
aggacccccagcttcatgtacccccagggcacctcgagcagccagatggtgctacgcggc
atggacctgctgctggagtgcatcgcctccggggtccccacaccagacattgcatggtac
aagaaaggcggggacctcccctcggacaaggccaagtttgagaactttaacaaggccctg
cgcatcaccaacgtctccgaggaagactccggcgagtatttctgcctggcctccaacaag
atgggcagcatccggcacacgatctcggtgagagtaaaggctgctccctactggctggat
gaacccaagaacttggtcctggctccgggcgaggatgggaggctggtgtgtcgcgccaat
gggaaccccaagcccactgtgcagtggatggtgaacggggagcccttgcagtcggcaccg
cccaacccgaaccgcgaggtggccggcgacaccatcatcttccgggacacgcagatcagc
agcagggccgtgtaccagtgcaacacctccaacgagcacggctacctgctggccaacgcc
ttcgtcagcgtgctggacgtgccaccgcggatgctgtcaccccggaaccagctcatcaga
gtgatcctgtacaaccgcacccggctggactgcccgttcttcgggtctcccatccccacg
ctccgatggtttaagaatgggcaggggagcaacctggacggcggcaactaccacgtgcac
gagaacggcagcctggagatcaagatgatccgcaaggaggaccagggcatctacacctgc
gtcgccaccaacatcctgggcaaagccgagaaccaggtccgcctggaggtcaaagacccc
accaggatctaccggatgccagaggaccaggtggccaaaaggggcaccacggtgcagctg
gagtgccgtgtgaaacacgacccctccctgaaactcaccgtgtcctggctgaaggacgag
gagccgctgtacatcagcaacaggatgaagaaggaggatgactcgctgaccatcttcggg
gtggctgagaaggaccaaggcagttacacgtgcgtcgccagcactgagctggaccaggac
ctggccaaggcctacctcaccgtgctagctgatcaggccactccaactaaccgtttggct
gccctgcccaaagggcggccagaccggccccgagacctggagctcaccgacctggccgag
cggagcgtgaggctgacctggatcccgggggacgccaacaacagccccatcacagactac
gtagtccagtttgaagaggaccagttccagccgggggtctggcatgaccattccaagttc
ccaggcaatgtcaactcggctgtcctgcagctgtccccgtacgtcaactaccagttccgg
gtcatcgccatcaacgaggtcggcagcagccaccccagcctcccgtcagagcgctaccga
accagtggggcaccccctgagtccaaccccggtgacgtgaagggagaggggaccaggaag
aacaacatggagatcacgtggacgcccatgaacgccacctccgcctttggccccaacctg
cgctacatcgtgaagtggcggcggagagagactcgcgacgcctggaacaacgccaccgtg
tggggctctcgctacgtggtggggcagaccccggtctatgtgccctacgagatccgagtg
caggccgaaaatgactttgggaaggcccccgagccagagacggtcatcggttactccggg
gaggactatccccgggctgcacccaccgacgtcaaggtccgagtcatgaacagcacagcc
atcagcctgcagtggaaccgtgtctactcggacacggtgcagggccagctcagagagtac
cgagcctactactggagggagagcagcttgctgaagaacctgtgggtgtctcagaagaga
cagcaagccagcttccccggggaccgcccccggggcgtggtgtcccaactcttcccctac
agcaactacaagctggagatggtggtggtcaatggcagaggcgatgggcctcgcagtgag
accaaggagttcaccaccccggagggagttcccagcgcccccagacgtttccgagtccgg
cagcccaacctggagacaatcaacctggagtgggaccacccggagcaccccaacggcatc
ctggttggatacacactcaaatacctgccctttaacggaaccaaactggggaagcagata
gtggaaaacttctctccgaatcagaccaagttcacggtgcagagggcggatcccgtgtca
cgttaccgtttcacgctcagcgccaggacgcaggtgggctctggggaagcagtcacagag
gagtcacctgcaccccctaacgaagctactccaacggcagctcctcccacgttgcccccg
actactgcgggtgccacgggcgccgtgagcagtactgacgctactgccattggcaccacc
accgaagccacagaagcccccaccgtcccaaccgccgcacctaccaccatcgccaccacc
accactgtcgccacaactactacaaccaccgtcgccaccaccacggagagtcctcctgcc
accaccaccaggactaagatccaggaatccgcccatccgccagcccccgacgagcagtcc
atatggaacgtcacagtgctccccaacagtaaatgggccaacatcacctggaagcacaat
ttcgggcccggaactgactttgtggttgagtacattgacagcaaccatacgaaaaaaact
gtccctgttaaggcccaggcccagcccatacagctgacagacctctatcccgggatgacg
tacacgttgcgggtctattcccgggaccacgagggcatcagcagtaccgtcatcaccttt
atgaccagtacagcttacaccaacaaccaggccgacatcgccacacagggctggttcatc
gggctcatgtgcgccatcgccctcctggtgctgatcctgctcatcgtctgtttcatcaag
aggagtcgtggtggcaagtacccagtgcgagagaagaaagatgttccccttggccccgag
gaccccaaagaagaggacggctcctttgactacagtgacgaggacaacaagcctctgcaa
ggcagccagacgtcgctggacggcaccatcaaacagcaggagagcgacgacagcctggtg
gactacggcgagggcggggagggccagttcaacgaggacggctccttcatcgggcagtac
acggtcaagaaggacaaggaggagacggagggcaacgagagctcagaggccacgtccccc
gtcaacgccatctactccctggcctaa
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integrated database retrieval system