Oryctolagus cuniculus (rabbit): 100351066
Help
Entry
100351066 CDS
T03373
Name
(RefSeq) alpha-actinin-4 isoform X1
KO
K05699
actinin alpha 1/4
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04510
Focal adhesion
ocu04520
Adherens junction
ocu04530
Tight junction
ocu04670
Leukocyte transendothelial migration
ocu04810
Regulation of actin cytoskeleton
ocu05146
Amoebiasis
ocu05203
Viral carcinogenesis
ocu05322
Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100351066
04520 Adherens junction
100351066
04530 Tight junction
100351066
09142 Cell motility
04810 Regulation of actin cytoskeleton
100351066
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
100351066
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100351066
09174 Infectious disease: parasitic
05146 Amoebiasis
100351066
09163 Immune disease
05322 Systemic lupus erythematosus
100351066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocu04131
]
100351066
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocu04812
]
100351066
04147 Exosome [BR:
ocu04147
]
100351066
Membrane trafficking [BR:
ocu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
100351066
Cytoskeleton proteins [BR:
ocu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
100351066
Exosome [BR:
ocu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100351066
Exosomal proteins of colorectal cancer cells
100351066
Exosomal proteins of bladder cancer cells
100351066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
XisI
Motif
Other DBs
NCBI-GeneID:
100351066
NCBI-ProteinID:
XP_051703085
LinkDB
All DBs
Position
5:2631283..2695492
Genome browser
AA seq
911 aa
AA seq
DB search
MVDYHAANQSYQYGPSSAGNGAGGGGSMGDYMAQEDDWDRDLLLDPAWEKQQRKTFTAWC
NSHLRKAGTQIENIDEDFRDGLKLMLLLEVISGERLPKPERGKMRVHKINNVNKALDFIA
SKGVKLVSIGAEEIVDGNAKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPY
KNVNVQNFHISWKDGLAFNALIHRHRPELIEYDKLRKDDPVTNLNNAFEVAEKYLDIPKM
LDAEDIVNTARPDEKAIMTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEHLMEDYER
LASDLLEWIRRTIPWLEDRVPQKTIQEMQQKLEDFRDYRRVHKPPKVQEKCQLEINFNTL
QTKLRLSNRPAFMPSEGRMVSDINNGWQHLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQ
KASIHEAWTDGKEAMLRQRDYETATLADIRALIRKHEAFESDLAAHQDRVEQIAAIAQEL
NELDYYDSHNVNTRCQKICDQWDALGSLTHSRREALEKTEKQLETIDQLHLEYAKRAAPF
NNWMESAMEDLQDMFIVHTIEEIEGLISAHDQFKSTLPDADREREAILAIHKEAQRIAES
NHIKLSGSNPYTTVTPQIINSKWEKVQQLVPKRDHALLEEQSKQQSNEHLRRQFASQANV
VGPWIQTKMEEIGRISIEMHGTLEDQLSHLKQYERSIVDYKPNLDLLEQQHQLIQEALIF
DNKHTNYTMEHIRVGWEQLLTTIARTINEVENQILTRDAKGISQEQMQEFRASFNHFDKD
HGGALGPEEFKACLISLGYDVENDRQGDAEFNRIMSVVDPNHSGLVTFQAFIDFMSRETT
DTDTADQVIASFKVLAGDKNYITAEELRRELPPDQAEYCIARMAPYQGPDAVPGALDYKS
FSTALYGESDL
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggtggactaccacgcggcgaaccagtcgtaccagtacggccccagcagcgcgggcaat
ggcgctggcggcggaggtagcatgggcgactacatggcccaggaggacgactgggaccgg
gacctgctgttggacccggcctgggagaagcagcagcgcaagaccttcacagcctggtgc
aactcccacctgcgcaaggccggcacgcagatcgagaacatcgacgaggacttccgcgac
gggctcaagctcatgctcctgctcgaggtcatttcgggggagcggctccccaagccggag
cgtgggaagatgagagtgcataagatcaacaacgtgaacaaagcgctggacttcatcgcc
agcaaaggggtcaagctggtctccatcggggcggaagagatcgtggacggcaatgcgaag
atgaccctgggcatgatctggaccatcatcctgaggttcgccatccaggatatctctgtg
gaagagacctctgccaaggaggggctccttctgtggtgccagagaaagacggcgccgtac
aagaacgtcaacgtgcagaacttccacatcagctggaaggatggtctcgccttcaatgcc
ctgatccaccggcacaggccagagctgatcgagtatgacaagctgagaaaggatgacccc
gtcaccaacctgaataatgcctttgaagtggccgagaaatacctcgacatccccaagatg
ctggatgcggaagacatcgtgaacacggcccggcccgacgagaaggccataatgacctat
gtgtccagcttctaccatgccttttcgggagcgcagaaggctgagactgccgccaaccgg
atctgcaaggtgctggctgtcaaccaggagaacgagcacctgatggaggattacgagcgg
ctggccagcgatctcctggagtggatccggcgcaccatcccctggctggaggatcgcgtg
ccccagaagacgatccaggagatgcagcagaagctggaggacttccgggactaccggcgc
gtgcacaagccgcccaaggtgcaggagaagtgccagctggagatcaacttcaacacgctg
cagaccaagctgcgcctcagcaaccggcccgccttcatgccctccgagggcaggatggtg
tcggacatcaacaacggctggcagcacctggagcaggccgagaagggctacgaggagtgg
ctgctgaacgagatccgcaggctggagcggctcgaccacctggccgagaagttccggcag
aaggcctccatccacgaggcctggaccgacgggaaggaggccatgctgaggcagcgggac
tacgagacggccaccctggcggacatccgggctctcatccgcaagcacgaggccttcgag
agcgacctggccgcacaccaggaccgcgtggagcagattgcggccattgcccaggagctc
aacgagctggattactacgactcccacaacgtcaacacccggtgccagaagatctgcgac
cagtgggacgccctgggctccctgacccacagccgcagggaggccctggagaaaacggag
aagcagctggagaccatcgaccagctgcacctggagtacgccaagcgggccgctcccttc
aacaactggatggagagcgccatggaggaccttcaggacatgttcattgtccacaccatc
gaggagatcgagggcctcatctccgcccacgaccagttcaagtccaccctgccggatgcc
gacagggagcgagaggctatcctggccatccacaaggaggcccagaggatcgccgagagc
aaccacatcaagctgtcgggcagcaacccctacaccaccgtcaccccgcagatcatcaac
tccaagtgggagaaggtgcagcagctggtgccgaagcgggaccacgcgctcctggaggag
cagagcaagcagcagtccaatgagcacctgcgccgccagttcgccagccaggccaacgtc
gtggggccctggatccagaccaagatggaggagatcgggcgcatctccatcgagatgcac
ggcaccctggaggaccagctgagccacctgaagcagtacgagcgcagcatcgtggactac
aagcccaacctggacctgctggagcagcagcaccagctcatccaggaggcgctcatcttc
gacaacaagcacaccaactacaccatggagcacatccgcgtgggctgggagcagctgctc
accaccatcgcccgcaccatcaacgaggtggagaaccagatcctcacccgcgacgccaag
ggcatcagccaggagcagatgcaggagttccgggcctccttcaaccacttcgacaaggac
catggtggggcgctggggcctgaggagttcaaggcctgcctcatcagcctgggctacgac
gtggagaacgaccggcagggcgacgccgagttcaaccgcatcatgagcgtggttgacccc
aaccacagcggcctcgtgaccttccaagccttcatcgacttcatgtccagggagaccacg
gacacggacacggccgaccaggtcatcgcctccttcaaggtcctggccggggacaagaac
tacatcaccgccgaggagctgcggagggagctgccccccgaccaggccgagtactgcatc
gcccgcatggcgccctaccagggccccgacgccgtgcccggcgccctcgactacaagtcc
ttctccacagccctgtacggcgagagcgacctgtga
DBGET
integrated database retrieval system