KEGG   Oryctolagus cuniculus (rabbit): 100351102
Entry
100351102         CDS       T03373                                 
Name
(RefSeq) cullin-4B isoform X3
  KO
K10609  cullin 4
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03420  Nucleotide excision repair
ocu04120  Ubiquitin mediated proteolysis
ocu05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    100351102
  09124 Replication and repair
   03420 Nucleotide excision repair
    100351102
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    100351102
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ocu04121]
    100351102
   03400 DNA repair and recombination proteins [BR:ocu03400]
    100351102
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ocu04147]
    100351102
Ubiquitin system [BR:ocu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     100351102
DNA repair and recombination proteins [BR:ocu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      100351102
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      100351102
Exosome [BR:ocu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   100351102
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW
Other DBs
NCBI-GeneID: 100351102
NCBI-ProteinID: XP_008271380
Ensembl: ENSOCUG00000015633
LinkDB
Position
X:complement(94926757..94996907)
AA seq 912 aa
MSHLSESGERSDDEVIEDDDGFSSPNPSAAAAAQEVRSATDGNTSTTPPTSAKKRKLNSS
SSSGSNSSNEREDFDSTSSSSSTPPLQPRDSASPSTSSFCLGVSVATSSHVPIQKKLRFE
DTLEFVGFDAKMAEESSSSSSSSSPTAATSQQQQLKNKSILISSVASVHHANGLAKSTTV
SSFANSKPGSAKKLVIKNFKDKPKLPENYTDETWQKLKEAVEAIQNSTSIKYNLEELYQA
VENLCSYKISANLYKQLRQICEDHIKAQIHQFREDSLDSVLFLKKIDRCWQNHCRQMIMI
RSIFLFLDRTYVLQNSMLPSIWDMGLELFRAHIISDQKVQNKTIDGILLLIERERNGEAI
DRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEE
EADRLITYLDQTTQKSLIATVEKQLLGEHLTAILQKGLNNLLDENRIQDLSLLYQLFSRV
RGGVQVLLQQWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDICFLKNEKFINA
MKEAFETFINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVF
EAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFK
QVKYMQNQNVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKL
QWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRT
LQSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTER
VFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIESLIDRDYMER
DKENPNQYNYIA
NT seq 2739 nt   +upstreamnt  +downstreamnt
atgtcacacttatctgaatcaggggaaaggagtgatgatgaggtcatagaagatgatgat
ggtttttcttcccccaatccctcagctgctgctgctgctcaggaggtcagatctgccact
gatggtaataccagcaccactccgcccacctctgccaagaagagaaagttaaacagcagc
agcagtagcggcagtaacagtagtaacgagagagaagactttgattccacctcttcctcc
tcttccactcctcctttacaacccagggattcggcatccccttcaacctcgtccttctgc
ctgggggtttcggtggctacttccagccacgtaccgatacagaagaagctgcgttttgaa
gacaccctggagtttgtagggtttgatgcgaagatggccgaggaatcctcctcctcctcc
tcctcatcttcaccaactgctgcaacatctcagcagcagcaacttaaaaataagagtata
ttaatctcttctgtggcttcggtgcatcatgcaaacggcctagccaaatctaccaccgtc
tctagctttgctaacagcaagcctggctctgctaagaagttagtgatcaagaactttaaa
gataagcctaaattaccagaaaactacacagatgaaacttggcagaaactgaaagaagca
gtggaagctattcagaatagtacttcaattaagtacaatttagaagaactctaccaggct
gtagaaaatctctgttcttacaagatttctgcaaacttgtacaaacagctgagacagatt
tgtgaagatcacatcaaagcacaaattcatcagttcagagaggattcattggatagtgtt
cttttcctaaaaaagattgatagatgctggcagaaccattgcagacaaatgatcatgatc
aggagcatctttttgtttctggatagaacttacgttcttcagaattcaatgctgccctcc
atttgggacatgggactggagttatttagagcacatattataagtgatcagaaagtccag
aataagacaattgatggcattcttctcttgattgagagggaaaggaatggcgaagcaatt
gatagaagtttactccgaagccttttaagtatgctctctgatttacaaatttatcaagat
tcttttgaacaacgatttttggaagaaactaaccgactctatgcagctgaaggccaaaaa
ttaatgcaagaaagagaggttcctgaatatcttcatcatgttaacaaacgtctagaagaa
gaagcagacagacttattacgtatttagatcagactacacagaaatcattaattgctact
gtagaaaaacaacttctaggggaacacttaacagcaattcttcagaaaggtttaaataac
ctccttgatgaaaaccgaattcaagatttgtctctcctgtatcagctcttcagtagagtt
cgaggtggcgttcaggttctcttgcaacaatggattgagtacatcaaggcatttggcagc
actattgtaattaatcctgaaaaagataaaaccatggttcaagaattgctagattttaaa
gataaggttgatcatataatcgatatctgctttctgaagaatgaaaagtttattaatgcc
atgaaagaagcatttgaaacattcattaacaagagaccaaataaacctgctgaacttata
gccaagtatgtagattcaaagcttcgtgcaggcaacaaagaagctacagatgaagaactt
gagaaaatgttggataaaattatgatcatatttagatttatctatggcaaggatgttttt
gaggccttctataagaaagatttagccaagcgtctgttagttgggaagagtgcatctgta
gatgctgaaaaatcaatgttgtccaaactcaaacatgaatgtggagctgctttcaccagc
aagcttgaagggatgtttaaagacatggagctttctaaagacatcatgattcagttcaaa
caggtaaaatatatgcagaaccagaatgtacctggaaatattgaattaactgtgaatatc
ctgacaatgggttattggccaacgtatgtacctatggaagtccatttaccaccagagatg
gtaaagcttcaggagatttttaagacattttacctaggtaaacacagtggcaggaaactt
cagtggcagtcaaccctaggacactgtgtgctaaaagcagagtttaaagagggcaaaaaa
gaactccaggtctctctttttcaaacactggtgctgctaatgtttaatgagggagaggag
ttcagtttagaagagatcaaacaggctactggaatcgaggatggagagttaaggagaaca
ttgcagtcattagcctgtggaaaagctagagttctggcgaaaaatccaaagggcaaagat
atagaagatggtgacaagttcatttgtaatgatgatttcaaacacaaacttttcaggata
aagatcaatcaaatccagatgaaagagacggttgaggaacaagcaagtactacagaaaga
gtatttcaagacagacaatatcaaattgatgctgcaattgttcgaattatgaagatgaga
aagacacttagtcacaatttgcttgtttcagaagtgtacaaccaattgaaattcccagta
aagcctgctgatcttaagaagagaatagaatccttaattgaccgggactacatggaaaga
gataaagaaaatccaaaccagtacaactatattgcatag

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