Oryctolagus cuniculus (rabbit): 100351201
Help
Entry
100351201 CDS
T03373
Name
(RefSeq) polyadenylate-binding protein 1-like isoform X1
KO
K13126
polyadenylate-binding protein
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03015
mRNA surveillance pathway
ocu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100351201
09123 Folding, sorting and degradation
03018 RNA degradation
100351201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100351201
03041 Spliceosome [BR:
ocu03041
]
100351201
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100351201
mRNA cycle factors
Stress granule specific factors
100351201
Spliceosome [BR:
ocu03041
]
Complex C
Other components
Complex C specific factors
100351201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_7
RBD_DEAH11
RRM_10
RRM_3
Motif
Other DBs
NCBI-GeneID:
100351201
NCBI-ProteinID:
XP_051700962
LinkDB
All DBs
Position
4:complement(3577252..3600621)
Genome browser
AA seq
630 aa
AA seq
DB search
MNAGGSGYPLASLYVGDLHPDVTEAMLYDTFSPAGPILSIRVCRDVATRRSLGYAYINFQ
QPADAERALDTMNFEVIKGQPIRIMWSQRDPGLRKSGVGNVFIKNLEDSIDNKALYDTFS
TFGNILSCKVVCDEHGSRGFGFVHFETHEAAQQAIRTMNGMLLNDRKVFVGHFKSRRERE
AELGARALEFTNIYVKNLRADVDERCLQDLFSQFGKMLSVKVMRDSSGHSRGFGFVNFEK
HEEAQKAVDHMNGKEVSGRLLYVGRAQKRAERQNELKRKFEQVKQDRLHRYQGVNLYVKN
LDDSIDDEKLRKEFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGT
KPLYVALAQRKEERKAILTNQYMQRLSTVRALGSPFLGSFQQPSRYFLPAVPQPPAQAAY
AGSGAVAPIQPAPRWSAQPPQPSFTCPPAASTVRPPGVPRRPRDHISSARQASTQVARPV
PPTQRVANIGTQTTGPSGTGCPIAGRPLLPYRCPSGGHHSQPMLRAASRPRVQLQEPAVH
VPGQEPLTASMLAAAPLHEQKQMIGERLYPLIHNVHKQLAAKITGMLLEIDNSELLLMLE
SPESLHAKIEEAVAVLQAHQAAEQPKVFTH
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccggcggctcgggttacccactcgcctcgctctacgtgggcgacctgcacccc
gatgtgactgaggccatgctctacgacaccttctcgcccgccggccccatcctgtccatc
cgcgtgtgccgcgacgtggccacccggcgctcgctgggctatgcctacatcaacttccag
cagccggccgacgcggagcgcgccctggacaccatgaacttcgaggtgatcaagggccag
cccatccgcatcatgtggtcccagcgagacccggggctgcgcaagtcaggcgtgggcaac
gtcttcatcaagaacctggaggactccatcgacaacaaggctctgtatgacaccttctcc
accttcgggaacatcctctcttgcaaggtggtgtgcgacgagcacggctcccggggcttc
ggcttcgtgcactttgagacccacgaggctgcgcagcaggccatccgcaccatgaacggg
atgctgctcaatgaccgcaaagtcttcgtcggccacttcaagtcccgccgggagcgggag
gcggagctgggggcacgggccctggagttcaccaacatctacgtgaagaacctccgggca
gacgtggatgagcggtgcctgcaggacctcttctcccagtttggaaagatgctgagtgtg
aaggtgatgagggacagcagcggccactcccggggctttggcttcgtcaactttgagaag
cacgaggaagcgcagaaggctgtggaccacatgaacgggaaggaggtgagcgggcggctg
ctgtacgtgggccgcgcccagaagcgggcggagcggcagaatgagctgaagcgcaagttc
gagcaggtgaagcaggaccggctgcaccgctaccagggcgtgaacctgtatgtgaagaac
ctggatgactctatcgatgatgagaaactgaggaaagagttctctccctacggagtgatc
accagtgcaaaggtgatgacagagggtggccacagcaaggggtttggctttgtgtgtttt
tcctctccagaggaggcgacaaaggccgtgacggagatgaacgggcgcatcgtgggcacc
aagccgctgtatgtggcgctggcgcagcgcaaggaggagcggaaggccatcctgaccaac
cagtacatgcagcgcctctccaccgtgcgggccctgggcagccccttcctgggctccttt
cagcagccctcgcgctacttcctgcccgctgtgccccagcctccagcgcaggcggcgtat
gctggctctggcgccgtggcacccatccagcctgcccccaggtggtcggcccagcctcca
caaccttcgttcacctgtcctccagctgcctccaccgtgcggccaccaggtgtgcctcgg
cgcccccgggaccacatcagcagtgccaggcaggcctccacccaggtggcacggccggtg
cctcccacccaaagagtggccaacattggtacccagaccacaggacccagcgggacggga
tgccctatcgcaggccggcctctcctgccgtaccgatgcccttcagggggccaccacagc
cagcctatgctaagggctgcgtcccggccccgtgtgcagctccaggagcccgctgtgcac
gtccccggccaggagcccctgactgcgtccatgctggctgcggcgcccctgcacgagcag
aagcagatgattggggagcgtctctaccccctcatccacaacgtccacaagcagctggct
gccaagatcacgggcatgctgctggagattgacaactcggagctgctgctcatgctggag
tctccggagtccctccacgccaagatagaagaggcggtggcagtgttgcaggcccaccag
gccgcggagcagcccaaggtgttcacgcactga
DBGET
integrated database retrieval system
