KEGG   Oryctolagus cuniculus (rabbit): 100351347
Entry
100351347         CDS       T03373                                 
Name
(RefSeq) polyubiquitin-B
  KO
K04551  ubiquitin B
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04120  Ubiquitin mediated proteolysis
ocu04137  Mitophagy - animal
ocu04140  Autophagy - animal
ocu05012  Parkinson disease
ocu05022  Pathways of neurodegeneration - multiple diseases
ocu05167  Kaposi sarcoma-associated herpesvirus infection
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    100351347
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    100351347
   04137 Mitophagy - animal
    100351347
 09160 Human Diseases
  09172 Infectious disease: viral
   05167 Kaposi sarcoma-associated herpesvirus infection
    100351347
  09164 Neurodegenerative disease
   05012 Parkinson disease
    100351347
   05022 Pathways of neurodegeneration - multiple diseases
    100351347
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ocu04121]
    100351347
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ocu04147]
    100351347
Ubiquitin system [BR:ocu04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   100351347
Exosome [BR:ocu04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   100351347
  Exosomal proteins of other body fluids (saliva and urine)
   100351347
  Exosomal proteins of colorectal cancer cells
   100351347
  Exosomal proteins of bladder cancer cells
   100351347
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 DUF2604 Rad60-SLD_2 TBK1_ULD Ubiquitin_5 Dsc3_N OTU1_UBXL
Other DBs
NCBI-GeneID: 100351347
NCBI-ProteinID: XP_008268907
LinkDB
Position
19:1733089..1735022
AA seq 305 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGC
NT seq 918 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagc
gacaccatcgagaatgtcaaggccaagatccaggataaggaaggcattcctcccgaccag
cagaggctcatcttcgccggcaagcagctggaagatggccgcactctttctgactacaac
atccagaaagagtccaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc
gtgaagaccctcactggcaagaccatcactctggaggtggagcccagtgacaccatcgag
aacgtcaaggccaagatccaggataaggaaggcattcctcccgaccagcagaggctcatc
ttcgccggcaagcagctggaagatggccgcactctttctgactacaacatccagaaagag
tccaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttcgtgaagaccctc
actggcaagaccatcaccctggaggtggagcccagcgacaccatcgagaatgtcaaggcc
aagatccaggataaggaaggcattcctcctgaccagcagaggctcatctttgctggcaag
cagctggaagatggccgcactctttctgactacaacatccagaaagagtccaccctgcac
ctggtcctgcgtctgagaggtggtatgcagatcttcgtgaagaccctcactggcaagacc
atcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaagatccaggat
aaggaaggcattcctcctgaccagcagaggctcatcttcgctggcaagcagctggaagat
ggccgcactctttctgactacaacatccagaaagagtccaccctgcatctggtcctccgt
ctgaggggtggctgttaa

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