KEGG   Oryctolagus cuniculus (rabbit): 100351408
Entry
100351408         CDS       T03373                                 
Name
(RefSeq) lysine-specific demethylase 5A isoform X2
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
ocu  Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ocu01009]
    100351408
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ocu03036]
    100351408
Enzymes [BR:ocu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     100351408
Protein phosphatases and associated proteins [BR:ocu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     100351408
Chromosome and associated proteins [BR:ocu03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    100351408
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_UBR7-like PHD_5 PHD_JHD1 PHD_2 PHD_Pygo
Other DBs
NCBI-GeneID: 100351408
NCBI-ProteinID: XP_002712829
Ensembl: ENSOCUG00000012946
LinkDB
Position
8:complement(74253534..74343762)
AA seq 1690 aa
MAGVGPGGYAAEFVPPPECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKDWQPP
FACEVKSFRFTPRVQRLNELEAMTRVRLDFLDQLAKFWELQGSTLKIPVVERKILDLYAL
SKIVASKGGFEMVTKEKKWSKVGSRLGYLPGKGTGSLLKSHYERILYPYELFQSGVSLMG
VQMPNLDLKEKVEPEVLGTDTQTSPDAGTRMNILPKRTRRVKSQSEPGDMNRNTELKKLQ
IFGAGPKVVGLAMGAKDKEDEVTRRRKVTNRSDAFNMQMRQRKGTLSVNFVDLYVCMFCG
RGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKCVAEECNKPREAFGFEQAVRE
YTLQSFGEMADNFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADISSKDFGS
GFPVKDGRRKMLPEEEEYALSGWNLNNMPVLDQSVLAHINVDISGMKVPWLYVGMCFSSF
CWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMRELAPELFESQPDLLHQLVTIM
NPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVN
HYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMVCKELTLMMEEETRLRESVVQMGVLM
SEEEVFELVPDDERQCSACRTTCFLSALTCSCNPERLVCLYHPTDLCPCPMQKKCLRYRY
PLEDLPSLLYGVKVRAQSYDTWVSRVTEALAANFNHKKDLIELRVMLEDAEDRKYPENEL
FRKLRDAVKEAETCASVAQLLLSKKQKHRQSPDSGRTRTKLTVEELKAFVQQLFSLPCII
SQARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGSSLYVELPELPRLKQELQQ
ARWLDEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAK
VCLQARPRHSVASLESIVNEAKNIPAFLPNVLSLKEALQKARDWTAKVEALQSGSNYAYL
EQLESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLKKNSSHTLLQVLSPRTDI
GIYGSGKNRRKKVKELIEKEKEKDLDLEPLSDLEEGLEETRDTAVVVAVFKEREQKEIEA
MHSLRAANLAKMTMVDRIEEVKFCICRKTASGFMLQCELCKDWFHNSCVPLPKSSSQKKA
SSWQAKEVKFLCPLCMRSRRPRLETILSLLVSLQKLPVRLPEGEALQCLTERAMSWQDRA
RQALATDELSSALAKLSVLSQRMVEQAAREKTEKIISAELQKAAANPDLQGHLSSFQQSA
FNRAVSSVSSSPRQTMDYDDEETDSDEDIRETYGYDMKDTASVKSSSSLEPNLFCDEEIP
IKSEEVVTHMWTAPSFCAEHAYSSASKSCSQGSSTPRKQPRKSPLVPRSLEPPVLELSPG
AKAQLEELMMVGDLLEVSLDETQHIWRILQATHPPSEDRFLHIMEDDSVEEKPLKMKGKD
SSEKKRKRKLEKVEQLFGEGKQKSKELKKMDKPKKKKLKLNADKSKELNKLAKKLAKEEE
RKKKKEKATAAKVELVKENTEKKREKKVLDIPSKYDWSGAEESDDENAVCAAQNCQRPCK
DKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCAKKQGPDSPGQAPPPSFIMSYK
LPMEDLKETS
NT seq 5073 nt   +upstreamnt  +downstreamnt
atggcgggcgtggggccggggggctacgcggcggagttcgtgccaccgccagagtgcccg
gtctttgagcccagctgggaggagttcacagacccgctcagctttatcggccgcatccgg
cctctggccgagaaaacgggcatctgcaagatccgaccgcccaaggattggcaacctcca
tttgcatgtgaagtaaaaagctttcgcttcactccaagagtccagcgcctaaatgaactt
gaggcaatgactagagtgagactggacttcttggatcaactagcaaaattttgggaactt
caaggatctactttgaagatccctgtggtggagagaaaaattctggatctgtatgctttg
agcaagattgttgccagcaaaggtggttttgaaatggtcaccaaagaaaagaagtggtct
aaagtgggtagtcgattgggatatctgccgggaaaaggaactgggtctcttttgaagtca
cactatgaaagaattctctacccatatgagcttttccagtctggtgtcagccttatgggg
gtacaaatgcctaatttagatcttaaggaaaaagtggagcctgaagttcttggcactgat
acccaaacttcccctgatgcaggcaccagaatgaatattctaccgaagagaacaagacgt
gtaaagtctcagtcagaacctggagacatgaatagaaacacagaactgaagaaacttcag
atttttggggctgggcccaaggttgtgggcctggcgatgggagcaaaggataaagaagat
gaggtcacccgaagacgaaaagttaccaacaggtcagacgcatttaacatgcaaatgaga
caacggaaaggaactctctctgttaactttgttgacctttatgtttgtatgttttgtggt
cggggaaacaatgaagataaattgcttttgtgtgatggatgtgatgacagctaccataca
ttttgtctaattcctccactacctgatgtgcccaaaggagactggaggtgtcctaaatgt
gttgctgaggagtgtaacaaacctcgagaagcctttggatttgaacaagctgtacgagag
tatacacttcagagctttggagagatggcagataattttaagtctgattatttcaatatg
ccagtccatatggttcccacagaacttgtagaaaaggaattctggcggctggtgagcagc
attgaagaagatgtcattgtagagtatggagctgatatctcctcaaaagactttggaagt
ggatttcctgtcaaagatggtcggcggaagatgctaccagaagaagaggaatatgcactt
tctggttggaatttgaataacatgcctgtcctagatcagtctgttcttgcacatattaat
gtggacatctctggaatgaaggtgccatggctgtatgtggggatgtgtttttcttctttt
tgctggcacattgaagatcactggagttattccatcaattacctacactggggggagcca
aagacatggtatggtgtgccatctcatgctgcagaacaactggaggaggtgatgagggag
ctggctcctgaattatttgaatcccagcctgatctcctacatcagttagtcaccataatg
aaccccaatgtgctaatggagcatggtgtgcctgtatacaggaccaatcagtgtgctggc
gagtttgttgtgacgtttcctcgtgcctatcactctggatttaatcagggctacaacttt
gctgaagctgtgaacttctgtactgctgactggttgcccattggacgtcagtgtgtgaat
cattaccgccggctaaggcgtcattgtgtcttttcccatgaagaactcattttcaagatg
gcagcagatcctgaatgcctagatgtaggcttggctgctatggtctgcaaagaattgacg
ctcatgatggaagaagaaacacgattaagggaatctgtagtacaaatgggtgtcctgatg
tcagaagaagaggtgtttgaacttgttcctgatgatgaacgacagtgttcagcatgcaga
accacctgttttctctctgctctcacatgctcctgtaatcctgagcggcttgtatgtctc
taccatccaactgatctgtgcccctgccccatgcagaagaaatgtcttaggtatcgttac
cctttagaagacctcccttctctgttatatggtgtgaaagtcagggcacagtcctatgac
acctgggtcagtcgtgttacagaagcattagctgctaacttcaaccacaagaaagatttg
attgaattgcgagtaatgctggaagatgctgaggacaggaaatacccagagaatgagctc
tttcgaaaactcagggatgctgtaaaagaagctgagacctgtgcttctgtggctcagcta
ctcctgagtaaaaagcagaaacaccggcagagcccagatagtgggaggacccggaccaaa
ttgacagtggaagagttgaaggcctttgtccagcagctttttagtcttccatgcatcatc
agccaagctcgacaagtcaagaatttgctggatgatgtggaagagtttcatgaacgtgca
caggaggccatgatggatgaaactccagattcttctaaactccagatgttgatagacatg
ggctccagcctctacgtagagctacctgaattaccccgactgaagcaagagctacaacag
gctcggtggctggatgaagtaagactgaccctgtcagatccacaacaagtcactttggat
gtaatgaagaaactgattgactctggggtcgggttggcgccccaccatgctgtggagaaa
gcaatggctgaactacaggagctccttacagtctctgaacgatgggaggaaaaggctaag
gtctgcctacaggcaagaccgcggcacagtgtggcaagcttagagagcattgtgaatgaa
gccaagaacattccagcctttctacccaatgtattgtccctgaaagaagccttacagaag
gctcgagattggacagctaaagtggaagctcttcagagtggcagcaactatgcttacttg
gaacaacttgagagtttgtctgctaaaggacgccctatccctgtgcgtcttgatgcgctg
ccccaggtggaatcacaggttgcagcagcacgggcttggagagagcgaactgggcgaacc
tttctgaagaagaattcgagccatacattgttacaggtgctaagtccccggactgacatt
ggtatatatggaagtggtaaaaatagaaggaaaaaagtgaaagaactaatagaaaaagaa
aaagaaaaggatctggaccttgagcctttgagtgatttggaggaaggattggaggaaacc
agagacacagctgtggtggtggcagttttcaaagaacgggagcaaaaggagattgaagcc
atgcattccctcagagcagccaacctagccaagatgacgatggtggaccgcatagaggaa
gtaaaattttgcatttgccgcaagacagcaagtgggtttatgctacagtgtgagctatgt
aaagactggttccataacagctgtgttccccttcctaaatcaagttcccagaagaaagca
tccagttggcaggccaaagaagtaaaattcctttgccctctctgcatgcgttctcggagg
ccgaggctagagactattctatcactcttggtgtctcttcagaagttgcctgtacggttg
ccagaaggagaggccctacagtgtttgacagaacgtgctatgagttggcaagatagagcc
cggcaggccctagccactgatgaattgtcctctgcactggccaagctgtctgtgttgagc
cagcgtatggtggaacaggcagctcgagaaaaaactgaaaagatcattagtgcagaactc
caaaaagcagctgccaatccagacttacagggacacttatctagtttccagcagtctgct
tttaaccgggcggtgagcagtgtatcatcttctcctcgacaaacgatggactatgatgat
gaagaaacagattctgatgaagacattcgggagacctatggctatgacatgaaggacaca
gctagtgtgaagtcctctagtagtctggaacccaatcttttttgtgatgaagagattccc
atcaagtcagaggaggtagtaactcacatgtggacagcaccctcgttctgtgcagaacat
gcctattcttctgcttctaagagttgttctcaaggttctagcacaccaaggaaacaacct
cggaagagccctttggtgccccgaagtttggaacctccagtgttggagttgtcacctgga
gccaaagcccagctggaagagctgatgatggtgggagatctcctagaagtgtctctggat
gagactcaacacatatggcgcattttgcaggcgacacacccaccctctgaagacagattc
ctgcatatcatggaggatgacagcgtggaagagaaaccactaaaaatgaagggaaaggat
tcttcagagaagaaacggaaacggaagctggaaaaggtagaacagctttttggggaagga
aaacagaagtctaaggagttaaagaaaatggacaaacctaaaaagaaaaaattaaaatta
aatgcagacaaatcaaaggagctgaacaaactggccaagaagctagcaaaagaagaagaa
agaaagaaaaagaaggagaaggctactgcagccaaagttgaacttgtgaaagagaataca
gagaagaaaagagagaaaaaagtgctagacattccctccaagtatgactggtcgggagcg
gaggagtctgatgatgagaatgccgtgtgtgccgcgcagaactgccagaggccctgcaaa
gacaaggtagactgggtacaatgtgatggtggctgtgatgagtggtttcatcaagtttgt
gtgggtgtatctccagaaatggctgaaaatgaagattacatctgtataaactgtgcaaag
aagcagggcccagatagcccaggtcaagcaccgcctccttccttcataatgagctacaaa
ctacccatggaggatcttaaagagaccagttag

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