KEGG   Oryctolagus cuniculus (rabbit): 100351462
Entry
100351462         CDS       T03373                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100351462
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ocu03041]
    100351462
Spliceosome [BR:ocu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    100351462
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd ANAPC4_WD40 PRP4 Beta-prop_EML WD40_MABP1-WDR62_1st WDR90_beta-prop_4th NBCH_WD40 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_Vps41 WD_LRWD1 Beta-prop_IFT140_1st WD40_like Ge1_WD40 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_WDR11_1st
Other DBs
NCBI-GeneID: 100351462
NCBI-ProteinID: XP_002708169
Ensembl: ENSOCUG00000005046
LinkDB
Position
1:complement(14230859..14248274)
AA seq 521 aa
MASSRASSTATKTKAPDDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIE
AGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITL
FGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGPNSLKVARLWI
ANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSP
NSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAA
DGSVKLWSLESDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQ
EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYH
IATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPG
WSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE
NT seq 1566 nt   +upstreamnt  +downstreamnt
atggcttcgtcacgagcctcctccacggccaccaaaacgaaagcgcctgatgacctggtg
gctccggtggtgaagaagccacacatttattatggaagtctggaagagaaggaaagggag
cggctggccaaaggagaatctgggattttgggaaaagaaggacttaaagcaggaattgaa
gcaggaaatattaatataacctccggagaagtatttgaaattgaagagcacatcagtgag
cggcaggcagaggtattggccgagtttgagaggaggaagcgggcccggcagatcaacgtt
tccacagatgactcggaggtcaaggcttgccttcgagccctgggggagcccatcacgctg
tttggagagggccctgctgaaagaagagaaaggttaagaaatatcctctcagtggttggt
actgatgccttaaaaaagaccaaaaaagatgatgagaaatctaagaagtccaaagaagag
tatcagcagacctggtaccacgaaggaccaaacagcctcaaggtggccagactgtggatt
gccaactattccctgcccagggcaatgaagcgcttggaggaggcccgtctccataaagag
attcctgagacaacacggacctcccagatgcaagagctgcacaagtctctccggtctttg
aataatttctgcagtcagattggagatgatcggcctatctcctactgtcattttagtccc
aattctaaaatgctggccacagcctgttggagtgggctttgcaagctctggtccgttcct
gactgtaacctccttcacactctgcgaggccataacacaaatgtaggagccatcgtcttc
catcccaaatccaccgtgtccttagaccaaaaagatgtcaacctggcctcttgcgctgct
gatggttctgtgaagctttggagccttgaaagtgatgaaccagtggcagatattgaaggc
cacacagtgcgtgtggcccgagttatgtggcatccatcaggacgcttcttgggcaccacc
tgttacgaccgttcctggcgcttatgggacctggaggcccaagaggagatcctgcatcag
gaaggccacagcatgggtgtgtacgacatcgccttccaccaagatggctctttggccggc
actgggggactggatgcattcggtcgagtttgggacctgcgcacaggacggtgtatcatg
ttcctagaaggccacctcaaggaaatctatggaataaacttctcccccaatggctaccac
atcgcaactggcagcggtgacaacacctgcaaagtgtgggacctgcgacagcggcgctgc
gtctataccatccctgcccatcagaacttggtgactggcgtcaagtttgagcctatccat
gggaacttcttgctcaccggtgcctatgataacacagccaagatctggacccaccccggc
tggtccccgctgaagactctggctggtcacgaaggcaaagtgatgggcctagacatttct
tctgacgggcagctcatagccacttgctcctatgacagaaccttcaagctctggatggct
gagtag

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