KEGG   Oryctolagus cuniculus (rabbit): 100351579
Entry
100351579         CDS       T03373                                 
Name
(RefSeq) LIM domain-containing protein 1
  KO
K16682  LIM domain-containing protein
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04390  Hippo signaling pathway
ocu04392  Hippo signaling pathway - multiple species
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04390 Hippo signaling pathway
    100351579
   04392 Hippo signaling pathway - multiple species
    100351579
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ocu03019]
    100351579
   03036 Chromosome and associated proteins [BR:ocu03036]
    100351579
Messenger RNA biogenesis [BR:ocu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     100351579
Chromosome and associated proteins [BR:ocu03036]
 Eukaryotic type
  Sister chromatid separation proteins
   Aurora kinases
    Regulators of Aurora kinases
     100351579
SSDB
Motif
Pfam: LIM zf-ChsH2
Other DBs
NCBI-GeneID: 100351579
NCBI-ProteinID: XP_002713442
Ensembl: ENSOCUG00000001984
UniProt: G1SRZ5
LinkDB
Position
9:102628220..102687223
AA seq 662 aa
MDKYGDLGLQASKFIEDLNMYEASKDGLFRVDKGASNNPEFEETRRVFATKMAKIHLQQQ
QQQQQLQEETLPRGGRGPVNGAAVGSRLVGDGAARPPLAASTGAATMVAAGQPLYSRQEQ
RTRPGVQGPKLGSQDCGSREGPASLERSAPQRPGICEDPSCLTHGDYYDNLSLASTKWGD
APPGSSSISLGAGSGWPGPQGSDPPLPKPCGDHRLYQPQPSLGSSRPFESALGGQDAGIG
NRSSEKPAGLWSTASSQRVSPGLSSPGLENGAPGLGPAQPRTPPVSAPLAPNSSGPGALP
RTDSRLGSEISGVTSKPAMDPQPWFQDGPKSYLSTPALSSLPASKDSAQLGTVPGLGPKP
GCTDLGTAAQLSPTSLAHPIMSTLPDSTSKEDPLGWSPDSSLGPELPESSPRVRLPCQTL
APGPELGPSAAELKLEALTQRLEREMDAHPKADYFGACVKCSKGVFGAGQACQAMGNLYH
DACFTCAACSRKLRGKAFYFVNGKVFCEEDFLYSGFQQSADRCFLCGHLIMDMILQALGK
SYHPGCFRCVVCNECLDGVPFTVDSENKIYCVRDYHKVLAPKCAACGLAILPPEGSDETI
RVVSMDRDYHVECYHCEDCGVELNDEDGHRCYPLEDRLFCHSCHVKRLEPGPPTAALHQH
HF
NT seq 1989 nt   +upstreamnt  +downstreamnt
atggataagtacggtgacctgggcctgcaggccagcaagttcatcgaggacctgaatatg
tatgaggcctccaaggacgggctcttccgagtggacaagggtgccagcaacaaccctgag
tttgaggagacccgcagggtgtttgccaccaagatggccaaaatccacctccagcagcag
cagcagcagcaacagcttcaggaggagaccctgcccagggggggcagaggccccgtcaac
ggagccgctgtgggcagcaggctggtgggcgatggtgctgccaggccccctctggcagcc
tccaccggggcagccaccatggttgccgccgggcagcccctgtacagccgccaggagcag
aggaccaggcccggtgtccagggcccgaaactgggcagccaagactgtggctccagggag
ggccctgccagtttggagaggtctgctccccagcggcctggtatctgtgaagatccttcc
tgcctcactcacggggactattatgacaatctctccctggcaagcaccaagtggggtgat
gctccacctgggtcctccagcatcagcctgggtgcagggagcgggtggcctggcccccaa
gggagtgacccgccactgcccaaaccctgtggggaccatcgcctgtaccagccgcagccc
tccctcggctccagcaggccctttgagagtgcccttggtggccaggatgctggcatcggt
aaccgcagcagtgagaagccagcaggcctttggtccacggcttcctcccagcgggtgagc
cctggcctgtcttctccaggcttggagaacggggccccaggcctgggacccgctcagccc
aggacccctcctgtgtcagcacccctggccccaaacagctctgggccaggagctcttccg
agaacagactcgcgcctggggagtgagatttcaggcgtgacgtccaaacccgccatggac
cctcagccctggttccaggatgggcccaagtcttacctttccactcctgccctgtcttcc
ttgccagccagcaaggacagtgcccagctgggtactgtccccgggctggggcctaagcct
ggctgtacagacctcggcacggctgcccagctcagccccaccagccttgcccatccgata
atgtccactctgcctgactcgacttccaaagaggatcccctggggtggtcccctgacagt
agcctgggtcctgagctcccagagagctcccccagggtgaggctgccctgccagaccctg
gccccgggacccgagctcggcccatcggccgccgagttaaaattggaagccctcacccag
cgcctggagcgggagatggatgctcacccgaaggccgattactttggagcctgtgtgaaa
tgcagcaaaggggtgtttggcgccggccaggcctgccaggccatggggaacctctaccac
gacgcgtgcttcacctgtgcggcctgtagccggaagctgagaggaaaagccttttatttt
gtcaatggcaaagtgttttgtgaggaagactttctgtactcgggtttccagcagtctgct
gacaggtgctttctctgtggacatctgatcatggacatgatcctgcaggccttggggaag
tcctaccacccgggctgtttccgctgcgtcgtctgtaatgagtgtttggacggggtgcct
ttcactgtggactcggagaacaagatctactgcgtccgagattaccacaaggttctggcc
cccaagtgtgcagcctgcgggctcgctattcttcctcccgagggctcagatgagaccatc
cgtgtggtgtccatggacagagactaccatgtggagtgttaccactgcgaggactgtggt
gtggagctcaatgatgaagacgggcaccgctgctaccccctggaggaccgcctgttctgt
cactcctgccacgtcaagcggctggagccgggccccccgaccgcagccctccaccagcac
cacttctag

KEGG   Oryctolagus cuniculus (rabbit): 100356027
Entry
100356027         CDS       T03373                                 
Name
(RefSeq) Wilms tumor protein 1-interacting protein
  KO
K16682  LIM domain-containing protein
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04390  Hippo signaling pathway
ocu04392  Hippo signaling pathway - multiple species
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04390 Hippo signaling pathway
    100356027
   04392 Hippo signaling pathway - multiple species
    100356027
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ocu03019]
    100356027
   03036 Chromosome and associated proteins [BR:ocu03036]
    100356027
Messenger RNA biogenesis [BR:ocu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     100356027
Chromosome and associated proteins [BR:ocu03036]
 Eukaryotic type
  Sister chromatid separation proteins
   Aurora kinases
    Regulators of Aurora kinases
     100356027
SSDB
Motif
Pfam: LIM
Other DBs
NCBI-GeneID: 100356027
NCBI-ProteinID: XP_051702699
LinkDB
Position
5:4309396..4322305
AA seq 438 aa
MQRSRAAADEAALLLAGLALREREPESGGDSPGRGRRGPRPGPGDEAAPALGRRGKGGGG
GVGPEAGADGPSRAERGPRRAAAPELSAQPAGSPRASLAGSDGGGGGGGGGGSARSSGIS
LGYDQRHGSPRSGRSDLRPGPGPPSGGSARSSVSSLGSRGSAGAYADLLLPGAGPAPARS
PEPAGPAPFPLPSLPLPPGRESGASAAERRLEALTRELERALEARTARDYFGICIKCGLG
IYGARQACQAMGSLYHTDCFTCDSCGRRLRGKAFYSVGEKVYCQEDFLYSGFQQTADKCS
VCGHLIMEMILQALGKSYHPGCFRCSVCNECLDGVPFTVDAESNIYCVRDYHTVFAPKCA
SCARPILPAQGCETTIRVVSMDRDYHVECYHCEDCGVELNDEDGHRCYPLEDRLFCHSCH
VKRLEPGPPTAALHQHHF
NT seq 1317 nt   +upstreamnt  +downstreamnt
atgcagcgctcccgggcggccgcggacgaggcggccctgctcctggccgggctggccctg
cgggagcgggagccagagtccggcggcgactctccgggccgcgggcggcgggggccgagg
cccgggccgggagacgaggcggcgccagcgctgggccgcagagggaagggcggcggcggc
ggcgttggccccgaggctggggcggacggaccgagccgcgcggagaggggcccccggcgc
gcggcggccccggagctcagtgcgcagccggcaggcagcccgcgggctagcctggcgggc
tccgacggcggcggcggcggcggtggcggcggcggcagcgcgcgctccagtggtatcagc
ctcggctacgatcagcgccacggcagcccgcgctccggccgctcggatctgcgtcccggc
cccgggccgccgtcggggggcagcgcccgctccagcgtgtccagtctcggctcccgcggc
tccgccggcgcctacgccgacctgctgctgcctggcgccggccccgcgccggctcgctcc
ccggagcccgcggggccggcccccttccctctgccttcgctgccgctgcccccgggccgg
gagagcggcgcgagtgcggccgagcggcgactggaggcgctcacccgggagctggagcgg
gcgctggaggcacgcacggcgcgggactacttcggcatttgcatcaagtgtgggcttggc
atctacggagcgaggcaggcgtgccaggccatggggagcctgtaccacaccgactgcttc
acctgtgactcctgtgggcgccggctccgcgggaaggccttctacagcgtgggcgagaag
gtgtactgccaggaggacttcctgtactccgggttccagcaaacggctgacaagtgcagt
gtgtgtggacacctcatcatggagatgatcctgcaggccctgggcaagtcctaccacccg
ggctgcttccggtgctccgtgtgcaacgagtgcctggacggggtgcccttcacggtggac
gcggagagcaacatctactgcgtcagggactaccacacggttttcgcaccaaaatgtgcc
tcctgtgcccgtcctatcctccctgcacagggctgtgagacgaccatccgtgtggtgtcc
atggacagggactaccatgtggagtgttaccactgcgaggactgtggtgtggagctcaat
gatgaagacgggcaccgctgctaccccctggaggaccgcctgttctgtcactcctgccac
gtcaagcggctggagccgggccccccgaccgcagccctccaccagcaccacttctag

KEGG   Oryctolagus cuniculus (rabbit): 100358827
Entry
100358827         CDS       T03373                                 
Name
(RefSeq) Wilms tumor protein 1-interacting protein isoform X1
  KO
K16682  LIM domain-containing protein
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04390  Hippo signaling pathway
ocu04392  Hippo signaling pathway - multiple species
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04390 Hippo signaling pathway
    100358827
   04392 Hippo signaling pathway - multiple species
    100358827
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ocu03019]
    100358827
   03036 Chromosome and associated proteins [BR:ocu03036]
    100358827
Messenger RNA biogenesis [BR:ocu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     100358827
Chromosome and associated proteins [BR:ocu03036]
 Eukaryotic type
  Sister chromatid separation proteins
   Aurora kinases
    Regulators of Aurora kinases
     100358827
SSDB
Motif
Pfam: LIM KRAB
Other DBs
NCBI-GeneID: 100358827
NCBI-ProteinID: XP_051692016
LinkDB
Position
Unknown
AA seq 328 aa
MTESQGTVTFKDVAIDFTQEEWKQLDPTQRNLYRNVMLENYNNLITVGYPFTKPDVIFKL
EQEEEPWVAEEEALRRHCPGICIKCGLGIYGARQACQAMGSLYHTDCFTCDSCGRRLRGK
AFYSVGEKVYCQEDFLYSGFQQTADKCSVCGHLIMEMILQALGKSYHPGCFRCSVCNECL
DGVPFTVDAESNIYCVRDYHTVFAPKCASCARPILPAQGCETTIRVVSMDRDYHVECYHC
EAEWTVRERNREKGLPLLLVHPQMAVAAGGLQPAHRADPKAGARCLSWSPMGCRAQALGP
SSTALPGHSRELAWKRGNRDRIWRPDRD
NT seq 987 nt   +upstreamnt  +downstreamnt
atgactgaatcccagggaacagtgacattcaaagatgtggctattgacttcacccaggag
gaatggaagcagctggatcccactcagaggaatctctaccggaacgtgatgctagagaac
tataacaacttaatcacagtgggctacccattcaccaaacctgatgtgattttcaagttg
gaacaagaagaagaaccatgggtggcagaggaagaggcactaaggagacactgtccaggc
atttgcatcaagtgtgggcttggcatctacggagcgaggcaggcgtgccaggccatgggg
agcctgtaccacaccgactgcttcacctgtgactcctgtgggcgccggctccgcgggaag
gccttctacagcgtgggcgagaaggtgtactgccaggaggacttcctgtactccgggttc
cagcaaacggctgacaagtgcagcgtgtgtggacacctcatcatggagatgatcctgcag
gccctgggcaagtcctaccacccgggctgcttccggtgctccgtgtgcaacgagtgcctg
gacggggtgcccttcacggtggacgcggagagcaacatctactgcgtcagggactaccac
acggttttcgcaccaaaatgtgcctcctgtgcccgtcctatcctccctgcacagggctgt
gagacgaccatccgtgtggtgtccatggacagggactaccatgtggagtgttaccactgt
gaggcagagtggacagtgagagagagaaacagagagaaaggtcttcccttgctgttggtt
caccctcaaatggccgtcgcggctggcgggctacagccggcacaccgcgctgatccgaag
gcaggagccaggtgcttatcctggtctcccatggggtgcagggcccaagcacttgggcca
tcctccactgcactcccgggccatagcagagagctggcctggaagaggggcaaccgggac
agaatatggcgccccgaccgggactag

KEGG   Oryctolagus cuniculus (rabbit): 100359157
Entry
100359157         CDS       T03373                                 
Name
(RefSeq) LIM domain-containing protein ajuba isoform X1
  KO
K16682  LIM domain-containing protein
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04390  Hippo signaling pathway
ocu04392  Hippo signaling pathway - multiple species
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04390 Hippo signaling pathway
    100359157
   04392 Hippo signaling pathway - multiple species
    100359157
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ocu03019]
    100359157
   03036 Chromosome and associated proteins [BR:ocu03036]
    100359157
Messenger RNA biogenesis [BR:ocu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     100359157
Chromosome and associated proteins [BR:ocu03036]
 Eukaryotic type
  Sister chromatid separation proteins
   Aurora kinases
    Regulators of Aurora kinases
     100359157
SSDB
Motif
Pfam: LIM
Other DBs
NCBI-GeneID: 100359157
NCBI-ProteinID: XP_051678605
LinkDB
Position
17:complement(44105711..44115152)
AA seq 548 aa
MERLGEKASRLLEKLRLSDSGSAKFGRRKGESSRSGSDGTPGPGKGRLSGLGAPRKSGSR
GAAGGPGDEPLEPAREQGPLDAERSPRGSFEAQRYEGSFPGGPPPTRALPLPQSLPPDFR
LETTAPALSPRSSFASSSASDASKPSSPRGSLLLDGAAAGGAGGSRPCSNRTSGISMGYD
QRHGSPLPAGPCLFGPPLPGASAGYSPGGVPSAYPELHAALDRLCAHRPAGFGCQESRHS
YPPALGSPGALAGAGVGAAGPLERRGAQPGRHSVTGYGDCAAGARYQDELTALLRLTVGT
GVREAGARGEPSGMEPSGLEEPPGPFVPEAARARMREPEAREDYFGTCIKCNKGIYGQSN
ACQALDSLYHTQCFVCCSCGRTLRCKAFYSVNGSVYCEEDYLFSGFQEAAEKCCVCGHLI
LEKILQAMGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPI
LPSEGCEDIVRVISMDRDYHFECYHCEDCRMQLSDEEGCCCFPLDGHLLCHGCHMQRLNA
RQPPANYI
NT seq 1647 nt   +upstreamnt  +downstreamnt
atggagcggttaggggagaaagccagtcgtctgctggagaagttaagactctcggactcc
ggcagcgccaagttcggccgcagaaagggtgaatccagccggtctgggtctgatgggacc
cccgggccgggcaaggggcgcctaagtgggttgggggcaccgaggaagtcagggtcccga
ggagctgctgggggacctggggatgagccgctggagcctgcccgagagcaagggcccctg
gacgcagagcggagcccgcgcggctccttcgaggcgcagcgctacgaaggctcctttccc
ggggggccgccgcccacccgggccttgcctctacctcagtccttgccccccgattttcgg
ctggagaccacagccccggccctaagcccccgctccagcttcgccagtagctcggccagc
gacgcgagcaagccgtccagcccccggggcagcctgctgctggacggcgcggcggctggc
ggagccggaggcagccggccctgcagcaaccgtaccagcggcatcagcatgggctacgac
cagcggcacgggagccccctgcccgccgggccgtgcctgttcggcccacccctgcccggg
gcttccgcgggctattcccccggaggggtcccgtccgcctacccggagctccacgccgcg
ctggaccgactgtgcgctcaccggcccgcggggttcggctgccaggaaagccgccactcg
taccccccggccctgggcagccccggagcactagccggggccggagtgggggcggcgggg
cccttggagagacggggagcgcagcccggacgacactcggtgaccggctatggggactgc
gccgcgggcgcccgataccaagatgagctgacagcattgctgcgcctgacggtgggcacc
ggcgttcgagaagccggcgcccgcggggagccctccgggatggagccgtcgggtctcgag
gagccgccaggtccgttcgttcccgaggccgcccgagcccggatgcgggaaccggaggcc
agagaggactactttggcacctgtatcaagtgcaacaaaggcatctatgggcagagcaat
gcctgccaggccctggacagcctctaccacacccagtgctttgtctgctgctcctgtgga
cgcactttgcgctgcaaggctttctacagcgtcaacggctctgtgtactgtgaggaagac
tatctgttttcagggtttcaggaggcagctgagaaatgctgtgtctgcggtcacttgatt
ttggagaagatcctgcaggccatggggaagtcctatcacccaggctgcttccggtgcatc
gtttgcaacaagtgcctggatggcatccccttcactgtggacttctccaaccaggtgtac
tgtgtgactgactaccacaaaaattacgctcccaagtgtgcggcctgcggccaacccatc
ctcccctctgagggctgtgaggacatcgtgagggtgatatccatggaccgagattatcac
ttcgagtgctaccactgtgaggactgccggatgcagctgagtgacgaggagggctgctgc
tgcttccctctggacgggcacttgctctgccatggctgtcacatgcagcggctcaacgcc
cggcagccccctgccaactatatttga

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