Oryctolagus cuniculus (rabbit): 100351898
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Entry
100351898 CDS
T03373
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04140
Autophagy - animal
ocu04211
Longevity regulating pathway
ocu05010
Alzheimer disease
ocu05014
Amyotrophic lateral sclerosis
ocu05016
Huntington disease
ocu05017
Spinocerebellar ataxia
ocu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100351898
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
100351898
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
100351898
05014 Amyotrophic lateral sclerosis
100351898
05016 Huntington disease
100351898
05017 Spinocerebellar ataxia
100351898
05022 Pathways of neurodegeneration - multiple diseases
100351898
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ocu01009
]
100351898
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocu04131
]
100351898
03029 Mitochondrial biogenesis [BR:
ocu03029
]
100351898
Protein phosphatases and associated proteins [BR:
ocu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100351898
Membrane trafficking [BR:
ocu04131
]
Autophagy
Autophagosome formation proteins
ULK complex
100351898
Mitochondrial biogenesis [BR:
ocu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
100351898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Jag_N
Motif
Other DBs
NCBI-GeneID:
100351898
NCBI-ProteinID:
XP_051699689
Ensembl:
ENSOCUG00000016393
LinkDB
All DBs
Position
3:complement(67411238..67516015)
Genome browser
AA seq
1589 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIQSKYKIAIQHQVLVVNGGECMAADRRVC
TYSAGTDTNPIFLFNKEMILCDRAPAIPKATFSTENDMELKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTNSYQKLLSKFESIYSNYLK
SIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLERLDSLPEHDGSEKAEMKRSTEL
VLSPDMPNKSSLTSLHKSVEHVSSDTTDAESGKEIKESCQSPIQHDEASIDAKDSDLPFF
NVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIRPFIAECHQTIAKLDNQNMKAIKG
LEDRLYALDQMIASCGRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLMIML
QNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLERVK
IVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKQLYEAEKSKRESFGKLFRK
SFLRNRLFRGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPLLRVPLLCD
FEPLHQHVLALHNLVKAAQSLDEMSQTITDLLNEQKASVSQASPQSASSPRIESATGMTT
TTSPRSPPPLTVQDPLCPTVCPLEELSPDSIDAHTFDFETIPHPNIEQTIHQVSLDLDSL
AESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTNTCK
ENFGDHASLNIQLEKCKVVAQDSHFSIQTIKEDLCHFRTFVQKEQCDFSNSLKCTAVEIR
NIIEKVKCSLEITLKEKHQKELQSLKNEYESKLEALIKESEENGNKIKKLKGDLACLEEV
LQNKDNEFALVKNEKEAVICLQNEKDQKLLEMENLMHTQNCEIRELKHSRELMLEDLKKL
HVENDEKIQLLREELQSLEQSHLKELEDTLHIRHTQAFEKVMEDHKVSLEKLKKENQQQI
DQLQASHATVIQEKEQQLQELKLKVSDLSDMRCKLEVELALKEAETDEIKILLEESRTQQ
KETLKSLLEKETENLRTEISKLNQKIQDNNENYQVGLVELRTLMAIEKDQCISELISRHE
EESNVLKAELSKVTSLHHQAFEMEQNLKEQIVELQNKLDSELSALEKQKDEKISQQEDKY
EIIIHRLVKDKETLVVRHEQDREQLIQKLNCEKDEAIQTALKEFKLEREVVEKELLEKIK
HLENQIAKSSTAESAREDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVRTSLI
AEQQTNFNTVLTREKMRKENIINDLSDKLKSTMQQQERDKDLIESLSEDRARLLEEKKKL
EEEVSKLRSSSFVPSPYVAAAPELYGACAPEVPGEIDRPALETAEEGRVDSAMETSMMSV
QENIHTLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDFQVGD
LVLIILDERHDNYVLFTVSPTLYFLHSESLPALDLKPGEGASGASRRPWVLGKVMEKEYC
QAKKAQNRFKVPLGTKFYRVKAVSWNKKV
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatatgtatttctggttaacactggaactactctaacatttgacactgaactt
acagtgcaaactgtggcagacctgaagcatgccattcaaagcaaatacaagattgctatt
caacaccaggtgctggtggtcaatggaggagaatgcatggctgcagatcgaagagtatgc
acctacagtgctggaacggacacaaatccaatttttctttttaacaaagaaatgatctta
tgtgatcgtgcacctgctattcctaaagctaccttttcaacagaaaatgacatggagtta
aaagttgaagagtctcttatgatgcctgcagtttttcatactgttgcttcaaggacacag
cttgcagtggaaatgtatgaagttgccaagaaactttgttctttttgtgaagggcttgtc
catgatgaacaccttcaacaccaaggctgggctgcaatcatggccaatctggaagactgt
acaaattcgtaccaaaagctactttccaagtttgaaagtatttattcaaattatctgaaa
tccatagaagacatcaagttaaaacttactcatttaggaactgctgtttcagtaatggcc
aagattccactgttggagtgcctaaccagacatagttacagagaatgtttagaaagactg
gattctttacctgaacatgatggctcagaaaaggcggagatgaaaagatccactgaactg
gtgctctctcctgatatgcctaacaaatcctcgttaacctcacttcacaagtcagtggag
catgtatcttcagataccacagatgctgaaagtggcaaagaaattaaagaatcatgtcaa
agtcccatccagcatgatgaagcatcaatagatgctaaagacagtgatctgccttttttt
aatgtttcattattagactggataaatgttcaagatagacctaatgatgtggagtctttg
gtcaggaagtgctttgattctatgagtaggcttgatccaagaattattcgaccatttata
gcagaatgccatcaaacaattgccaaacttgataatcagaatatgaaagctattaaaggg
cttgaagatcgactgtatgccctggaccagatgatcgctagctgtggccggctggtgaat
gaacagaaagaacttgctcagggatttttagctaatcagatgagagcagaaaacttgaag
gatgcatctgtattacctgatttgtgcctgagtcatgcaaatcagttgatgattatgttg
caaaatcatagaaaactgttggatattaaacagaagtgcaccactgccaaacaagaacta
gctaataatctacatgttagactgaagtggtgttgttttgtaatgcttcatgctgatcaa
gatggagagaaattacaagccttgctccgccttgtaatagagctgttagagagagttaaa
attgttgaagctctcagtacagttcctcagatgtactgcttagctgttgttgaggttgta
aggagaaaaatgttcataaaacactacagggagtgggctggtgctttagtcaaagatgga
aaacaattatatgaagctgaaaagtcaaaaagggaatcctttgggaaattatttaggaaa
tcttttttaagaaatcgtctgtttaggggattggactcctggccaccttctttttgtact
caaaaacctcgaaagtttgactgtgaacttccagatatttcattaaaagatttacagttt
ctgcaatcattttgtccttcggaagttcagcctttgctcagggttcccttactttgtgac
tttgaacctctacaccagcatgtacttgctctacataatttggtaaaggcagcacaaagt
ttggatgaaatgtcacagaccattacagatctgctcaatgaacaaaaggcatctgtaagt
caggcctccccacagtcggcttcttcaccacggatagaaagtgcaacaggaatgacaact
actacctcaccaagaagtcctcccccactcactgttcaagatcccttatgtcccacagta
tgtccattagaagaattatctccagatagcattgatgcacatacgtttgattttgaaacg
atcccccatccaaacatagaacaaactattcaccaggtttctttagacttggattcatta
gcagaaagtcctgaatcagattttatgtctgctgtgaatgagtttgtaatagaagaaaat
ttatcatctcctaatcctataagtgacccacaaagtccagaaatgatggtggaatcactt
tattcatccgttatcaatgcaattgacagtagacgtatgcaggatacaaatacgtgtaaa
gagaattttggagatcatgcttctttaaacatccagttagaaaaatgtaaagttgttgcc
caggactctcactttagtattcaaaccatcaaggaagacctttgtcactttagaacattt
gtacaaaaagaacagtgtgacttctccaattctttaaaatgtacagcagtggaaataaga
aatattattgaaaaagtaaaatgttccctagaaataacactaaaagagaaacatcagaaa
gaactacaatccttaaaaaatgaatatgaaagtaaacttgaggcactaataaaggaaagt
gaagaaaatggaaacaaaattaaaaaattgaaaggagacttagcatgtcttgaggaggtt
ttacaaaataaagataatgaatttgctttagttaaaaatgaaaaagaagctgtcatctgc
ttgcagaatgaaaaagatcagaagttgttagagatggaaaatttaatgcacactcaaaat
tgtgaaattagagaactgaagcattcaagagaactaatgctagaagacttaaagaagctc
cacgttgaaaacgatgagaagatacagttattgagggaagaacttcagtccttagagcaa
agtcatctaaaggagttagaggatacactgcacattaggcacacacaggcatttgagaaa
gttatggaagaccacaaagtttctttggagaaattgaaaaaggaaaaccagcaacaaatt
gatcagctacaagcgtctcatgctacagtgatccaggagaaagagcaacagctccaagaa
ttaaaactcaaggtttctgacttgtcagacatgagatgtaagttagaggttgaacttgca
ttgaaggaagcagaaactgatgaaataaaaattttgttggaagaaagcagaactcagcag
aaagagaccttgaaatctctccttgaaaaagaaacagaaaatttgagaacagaaattagt
aaattaaaccaaaagattcaggataataatgaaaattatcaggtgggcctagtagagcta
agaactttaatggcaattgaaaaagatcaatgcatttcagagttgattagtagacatgaa
gaagaatctaatgtgcttaaagctgaattaagcaaagtaacatcgttgcatcaccaagca
tttgagatggaacaaaacctaaaagaacaaatagttgaactgcagaataaattggactca
gaattgagtgctcttgaaaaacagaaagatgaaaaaattagtcaacaagaagataaatat
gaaattattatacaccgccttgtgaaagacaaagagacattggttgtgcgccatgaacaa
gacagagaacagttaattcagaagcttaattgtgaaaaagatgaagctattcagactgcc
ctaaaagaatttaaattggagagagaagttgttgagaaagagttattagaaaaaattaag
catcttgaaaatcaaatagcaaaaagttctactgctgaatctgccagggaggattcttca
agcttagttgctgaacttcaagaaaagctacaggaagaaaaagctaaatttctagaacag
cttgaagagcaagaaaaaagaaagaatgaagaaatgcagaatgttcgaacatctttgatt
gcagagcaacagaccaattttaacactgttttaacaagagagaaaatgagaaaagaaaac
ataataaatgatcttagtgataagttgaaaagtacaatgcaacaacaagaacgggacaaa
gatttgatagagtcactttctgaagatcgagctcgattgcttgaggaaaagaaaaaactt
gaagaagaagtcagtaagttgagaagcagcagttttgttccttcaccatatgtagctgca
gccccagaactctatggagcttgtgcacctgaagtcccaggtgaaatagatagacctgcc
ctggaaacagcagaagaaggaagagtggattcagcaatggagacaagcatgatgtctgta
caagaaaatatccatacactatctgaagaaaaacagaggataatgctgttagaacgtaca
ctgcagttaaaggaagaagaaaataagcggttaaatcaaagactgatgtctcagagtatg
tcttctgtatcttcaaggcattctgaaaagatagctataagagattttcaggtgggagat
ttggtactcatcatcctagatgaacgccacgacaattatgttttgtttactgttagtcct
actttatatttcctgcactcagagtctctgcctgccctggatctcaaaccaggtgagggt
gcttcaggtgcatctagaagaccctgggtacttggaaaagtaatggagaaggaatattgt
caagccaaaaaggcacaaaatagatttaaagttcctttgggaacaaagttttaccgagtg
aaagctgtgtcgtggaataagaaagtataa
DBGET
integrated database retrieval system
