Oryctolagus cuniculus (rabbit): 100351946
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Entry
100351946 CDS
T03373
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ocu03009
]
100351946
Ribosome biogenesis [BR:
ocu03009
]
Eukaryotic type
90S particles
Other 90S particles
100351946
Pre-60S particles
Other pre-60S particles
100351946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
100351946
NCBI-ProteinID:
XP_002718648
Ensembl:
ENSOCUG00000005662
UniProt:
G1SPF1
LinkDB
All DBs
Position
18:complement(42491597..42520449)
Genome browser
AA seq
1293 aa
AA seq
DB search
MGRSGKLPSGVSAKLKRWKKGHSSDSNPAISRHREAARSRFFSRPSGKSDLTVDAVKLHN
ELQSGSLRLGSRGAPETAMEEEGELAVTEKSSGTFLSGLSDCTNVTFSKVQRFWESSSAA
HKEICAVLAAVTEVIRSQGGKETETEYFAALMTTMEAVESPESLAAVAYLLNLVLKRVPS
AVLIKKFSDTSKAFMDVMSAQAGSGSSSALRWVLSCLATLLRKQNLEAWGYPVTLQVYHG
LLSFTVHSKPKIRKAAQHGVCSVLKGSEFMFGEKAPAQHPAAVSTAKFCIQEIEKSGGSK
EATTTLHMLTLLKDTLACFPEGLVKSCSETLLRVMTLSHVLVTACAMQAFHSLFHAKPGP
GTLSAELNAQIITALYDYVPSENDLQPMLAWLKVMEKAHINLVRLQRDLGLGHLPRFFGT
AMTCLLSPHSHVVTAATQSLKELLKECVAPHMAAIGSVTSSASGPAQYIAKMFRAAEEGL
TYKFHAVWSSVLQLLCVFFEACGRQAHPVMKKCLRSLCDLRLSPHFPHTAALDQAVGAAV
TSMGPEVVLQAVPLEIDGSEETLDFPRSWLLPVIRDHVRETRLGFFTTYFLPLATTLKSK
AMELAQAGSTVESKIYDTLQWQIWTLLPGFCTRPTDVSTSFKGLARTLGMAISERPDLRV
TVCQALRTLITKGCEAEADRAEVSRFAKNFLPILFNLYGQPVAAGDTPAPRRAVLETIRT
YLTITESQLVNGFLEKASEKVLDPASSEFTRLSVLDLVVALAPHADEAAISKLYSTIRPY
LESKAHGVQKKAYRVLEEVCASTQGPGARFVQSHLDDLKKTLLDSLRSTASPAKRPRLKC
LIHIVKQLSAEHAEFIAALVPEVILCTKEVSVGARKNAFALLVEMGHAFLRFGSNQEEAL
QRYLVLIYPGLVGAVTMVSCSILALTHLLFEFKGLMGTSTVEQLLENVCLLLASRTRDVV
KSALGFIKVAVVVMDVTHLAKHVQLVLEAIGKLSDDMRRHFRTKLRNLFTKFIRKFGFEL
VKGLLPEEYHRVLVNIRKAEARAKRHRALSQAAVEEEEEEEEPAQGKGDSIEEILADSDD
EEDNEEEERNRGKEQRKLARQRSRAWLKEGGGDEPLNFLDPKVAQRVLATQPGPGRGKRK
DHGFKVSADGRLIIRDEEDEKVEEEEGTRGEDEEMTDLMADVNVRNKKQKLKQQKEEEEE
ELETPPQYQAGGSGIHRPIAKKVVPGAEYKAKKAKGDVKKKGRLDPYAYIPLNRTKLNRR
KKVKLQGQFKGLVKAAQRGTRAGHRLRRKGHRP
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgggccgctcggggaagttgccctccggtgtctcggccaagttgaagcgctggaagaaa
ggccacagcagcgacagcaaccctgccatctcccgccaccgcgaagccgcccgcagccgc
ttcttcagccggccgtcaggcaagagcgacctgacggttgatgctgtcaagttgcataat
gagctgcagtcagggtccctgcgcctgggcagccgcggagccccggagacggccatggag
gaagagggggagctggctgtcaccgagaagtcctccggcaccttcctgagcggcctctcc
gactgcaccaacgtcaccttcagcaaagtgcagcgcttctgggagtccagctcggctgct
cacaaagagatctgtgctgtgctggccgccgtcaccgaggtgatccgctcccagggcggg
aaggagacggagaccgagtactttgccgctctgatgaccaccatggaagcagtggagtcc
ccagagtctctggccgccgtggcttacctgctgaacctcgtcctgaagcgggtgcccagt
gccgtgctcattaagaagttctccgatacctccaaagccttcatggatgtcatgtcagcc
caggccggcagtggctcctcctctgccctccgatgggtcctctcctgcctggccaccctt
ctgcggaagcaaaacctggaggcctggggctaccccgtgacccttcaggtgtaccacggg
ctcctgagcttcactgtgcacagcaagcctaagatccgcaaggctgcccagcatggagtg
tgctcggtcctcaagggcagcgagttcatgtttggtgaaaaggcccctgcccagcatcct
gctgccgtttccaccgccaagttctgcatccaggagattgagaagtctggaggctccaag
gaagccaccaccacgctgcacatgctgacgctgctgaaggacacgctggcctgcttccca
gaaggcctggtgaagagctgcagcgagactctcctccgggtcatgaccttaagccatgtg
ctggtgacagcctgtgccatgcaggcctttcacagcctcttccatgccaagccaggccca
ggtaccctgtcagcagagctcaacgcccagatcatcacggccttatatgactacgttccc
agtgaaaatgacttacagcccatgctcgcctggcttaaggttatggagaaagcccacatc
aacctggtcaggttgcagcgggacctggggctgggccaccttcctcgcttttttggaaca
gccatgacctgtctcctgtccccccactctcacgtggtgacagctgccacccagagcctc
aaggagctcctgaaggaatgcgtggctccccacatggctgccattggctcggtgacctcc
tcggcctcaggccccgcccagtacattgccaagatgttcagggccgcagaggagggcctg
acgtacaaattccatgcggtctggagctccgtgttgcagctgctgtgtgtcttctttgag
gcgtgtggaaggcaggcgcaccctgtgatgaagaagtgccttcggtccctgtgtgacctg
cgcctctcccctcacttcccccacacggcagccctcgaccaggcagtgggggctgcagtg
accagcatgggacctgaggtggtgttgcaggctgtgcctttggagatcgatggctctgag
gagactctggactttccacggagctggctgttgcctgttatccgggaccacgttcgggaa
acgcgactgggtttcttcaccacctacttcttgcctctggctaccaccctgaagagcaaa
gcaatggaactagcccaggcaggcagcacggtggagtccaagatctacgacacactccag
tggcagatctggaccctcctgcctggtttctgcacgaggcccacggatgtgtccacctcc
ttcaaagggctggcacggacactgggcatggccatcagtgagcgcccagacctgagagtc
accgtgtgccaggccctgcgcaccctcatcaccaagggctgtgaggcggaggctgaccgt
gccgaagtgagccgctttgccaagaactttctcccgatcctcttcaacctgtacgggcag
cctgtggctgccggggacacgccagctcctcgccgggctgtgctggagaccatcagaact
tacctcaccatcaccgagtcgcagttggtgaacggattcctggagaaagccagtgagaag
gtgctcgaccctgccagctctgagttcaccagattgtctgttctggacctggtcgtagcc
ttggctccccatgctgacgaagctgccatcagcaagctgtactccaccatccggccctac
ctagagagcaaggcccacggggtgcagaagaaggcctaccgcgtgctggaggaggtgtgt
gccagcacccagggcccaggggcccgcttcgtgcagagccacctggacgacctgaagaag
accctgctggactcgctgaggagcacagcctctcccgccaaaaggccccgcctgaagtgc
ctcatccacatcgtgaagcagctgtcggccgagcacgcggagttcatcgcggccctcgtg
ccggaggtgatcctatgcaccaaggaggtgtcagtgggtgcgcggaagaacgcctttgcc
ctgctggtggagatgggccacgctttcctgcggtttggctccaaccaggaagaggccctg
cagcgctacctcgtgctcatctaccctggcctcgtgggcgcggtgaccatggtcagttgc
agcatcctggctctgacccacctcctgttcgagtttaaaggtctgatggggaccagcacg
gtggagcagctgctggagaatgtgtgcctgctcctggcctcccgcacccgcgacgtggtc
aagtccgcactgggcttcatcaaggtggctgtggttgtcatggacgtcacacacttggcc
aagcatgtgcagctggtgctggaggccatcgggaagctctccgacgacatgcggcggcac
ttccgcaccaagcttcgcaacctgttcaccaagttcatccgcaagtttgggtttgagctg
gtgaaggggctgctgcctgaggagtaccacagagtcctggtcaacatcaggaaagccgag
gcccgggccaagaggcaccgggccctgagccaggctgcagtggaggaggaagaggaggag
gaagagcccgcccagggcaaaggtgatagcatcgaggagattttggctgactcggacgat
gaggaggacaatgaggaagaggaaagaaaccggggcaaggaacagcggaagctggcccgg
cagaggagccgggcgtggctgaaggaaggtggtggggatgagcctctcaacttcctggat
cccaaggtggcccagcgagtcctggccacacagccagggcctggccggggcaagaggaag
gaccatgggttcaaggtgagcgccgacggccgattgatcatccgggacgaggaggatgag
aaggtggaggaagaggagggcaccagaggtgaggacgaagagatgactgatctgatggca
gatgtgaacgtcaggaataaaaagcagaagctgaagcagcagaaggaggaggaggaggag
gagctggagacgccccctcagtaccaagctggaggctctggcattcatcgccctatagcc
aagaaagttgtgcccggggctgaatacaaggccaagaaagcaaagggtgacgtgaagaag
aaaggtcggctcgacccctacgcctacatccccctcaacagaaccaagctcaaccgcagg
aaaaaggtgaagctgcagggacagttcaaaggcctggtgaaagctgcgcagcgggggacc
cgggccggacacagactccgcagaaagggtcaccggccctga
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