Oryctolagus cuniculus (rabbit): 100352004
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Entry
100352004 CDS
T03373
Name
(RefSeq) piezo-type mechanosensitive ion channel component 2 isoform X1
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocu04131
]
100352004
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocu04040
]
100352004
Membrane trafficking [BR:
ocu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
100352004
Ion channels [BR:
ocu04040
]
Other channels
Mechanosensitive channel (Piezo)
100352004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_TM1-24
Piezo_TM25-28
Piezo_cap
Piezo_THU9_anchor
THU_Piezo1
DUF6958
Motif
Other DBs
NCBI-GeneID:
100352004
NCBI-ProteinID:
XP_051707394
Ensembl:
ENSOCUG00000010238
LinkDB
All DBs
Position
9:complement(64940783..65393847)
Genome browser
AA seq
2854 aa
AA seq
DB search
MASEVVCGLVFRLLLPICLAVACAFRYNGLSFVYLIYLLLIPLFSEPTKATMQGHTGRLL
KSLCLTSLSFLLLHIIFHITLASLEAQHRIAPGYNCSTWEKTFRQIGFESLKGADAGNGI
RVFVPDIGMFIASLAIWLICRNIVQKPVTEDAAQYNPEFENEELAGGEKVDPEEALIYDE
EFDGGDGAEGELEESTKLKLFRRFASAASKLKEFIGNMITTAGKVVVTILLGSSGMMLPS
LTSSVYFFVFLGLCTWWSWCRTFDPLLFSCLCVLLAIFTAGHLIGLYLYQFQFFQEAVPP
NDYYARLFGIKSVIQTDCSSTWKIIVNPELSWYHHANPILLLVMYYTLATLIRIWLQEPL
VQEDKTKEEDRALACSPIQITAERRRSLWYATHYPTDERKLLSMTQDDYKPSDGLLVTVN
GNPVDYHTIHPSLPVENGPAKADLYSTPQYRWEPSGESSEKKEEEEDEKEEFEEERSHEE
KRSVKVHAMVSVFQFIMKQSYICALIAMMAWSITYHSWLTFVLLIWSCTLWMIRNRRKYA
MISSPFMVVYGNLLLVLQYIWSFELPEIKKVPGFLEKKDPGELASKILFTITFWLLLRQH
LTEQKALREKEALLAEVKIGSEENEEKDEDLQDIPVEGEPQGKEEEEAAKEEKPERKKEV
EEEEVEEEDDQDIMKVLGNLVVAMFIKYWIYVCGGMFFFVSFEGKIVMYKIIYMVLFLFC
VALYQVHYEWWRKILKYFWMSVVIYTMLVLIFIYTYQFENFPGLWQNMTGLKKEKLEDLG
LKQFTVAELFTRIFIPTSFLLVCILHLHYFHDRFLELTDLKSIPSKEDSTIYRLAHPEGS
LPDLAAMNFTASLEKPEVKKLTELAEEKPEGCLEKGEPGKDSEESEVEEDEEEESEEEEE
TSDLKNKWHLVIDRLTVLFLKFLEYFHNLQVFMWWILELHIIKIVSSYIIWVSVKEVSLF
NYVFLISWAFALPYAKLRRLASSVCTVWTCVIIVCKMLYQLQTIKPENFSVNCSLPNENQ
TNIPLQDLNKSLLYSAPIDPTEWVGLRKSSPLLVYLRNNLLMLAILAFEVTIYRHQEYYR
GRNNLTAPVSKTIFHDITRLHLDDGLINCAKYFINYFFYKFGLETCFLMSVNVIGQRMDF
YAMIHACWLIAVLYRRRRKAIAEVWPKYCCFLACIITFQYFICIGIPPAPCRDYPWRFKD
ANFNDNIIKWLYFPDFIVRPNPVFLVYDFMLLLCASLQRQIFEDENKAAVRIMAGDNVEI
CMNLDAASFSQHNPVPDFIHCRSYLDMSKVVIFSYLFWFVLTIIFITGTTRISIFCMGYL
VACFYFLLFGGDLLLKPIKSILRYWDWLIAYNVFVITMKNILSIGACGYIGTLVKNSCWL
IQAFSLACTVKGYKMPDDDSSCKLPSGEAGIIWDSICFAFLLLQRRVFMSYYFLHVVADI
KASQILASRGAELFQATIVKAVKARIEEEKKSMDQLKRQMDRIKARQQKYKKGKERMLSL
TQESGEGQDIQKLSEEDDEREAEKQKAKGKKKQWWRPWVDHASMVRSGDYYLFETDSEEE
EEEELKKEDEEPPRKSAFQRAIGKFASAILALPKSVIKLPKTILQYLIRAAKFVYQAWIT
DPKTALRQRRKEKKRSAREDQKRRRKGSGDGAVEWEDREDEPVKKKSDGPDNIIKRIFNI
LKFTWVLFLATVDSFTTWLNSISREHIDISTVLRIERCMLTREIKKGNVPTRESIHMYYQ
NHIMNLSRESGLDTIDQRPGAAAGAQPAHRMDSLDSHDSISSCYTEATMLFSRQSTLDDL
DGPDTVPKTSERARPRLRKMFSMDVSSSSADSGSLASSEPTQCTMLYSRQGTTETIEEVE
AEQEEEVLGAAPQPGDAEEEEDEEEEEEGVEEAEEEREEEEEFPVGAEDCSLTPEEELPQ
FSTEDGDVEAPPSYSKAVSFEHLSFGSQDDSGAKNHMVVSPDDSRTDKLESSILPALTHE
LTASELLLNKMFHDDELEESEKFYVGQPRFLLLFYAMYNTLVARSEMVCYFVIILNHMVS
ASMITLLLPILIFLWAMLSVPRPSRRFWMMAIVYTEVAIVVKYFFQFGFFPWNKNVELNK
DKPYHPPNIIGVEKKEGYVLYDLIQLLALFFHRSILKCHGLWDEDDIVESGTDKDESDDE
LSLGHGRRGSCDSLKSINLAASVESVHVTFPEQQMAVRRKRSGGSSQISPTSSFSSNRSR
RGSTSTRNSSQKGSVLSIKQKSKRELYMEKLQEHLIKAKAFTIKKTLQIYVPIRQFFYDL
IHPDYSAVTDVYVLMFLADTVDFIIIVFGFWAFGKHSAAADITSSLSEDQVPGPFLVMVL
IQFGTMVVDRALYLRKTVLGKVIFQVILVFGIHFWMFFILPGVTERKFSQNLVAQLWYFV
KCVYFGLSAYQIRCGYPTRVLGNFLTKSYNYVNLFLFQGFRLVPFLTELRAVMDWVWTDT
TLSLSSWICVEDIYAHIFILKCWRESEKRYPQPRGQKKKKVVKYGMGGMIIVLLICIVWF
PLLFMSLIKSVAGVINQPLDVSVTITLGGYQPIFTMSAQQSQLKVMNKTTFDKFVKAFTK
DTGAMQFLENYEKEDITVAELEGNSNSLWTISPPSKRKMIQELMDLKSSFSVVFSWSIQR
NMSLGAKAEIATDKLSFALENVTRENIAKMIAGNDTESSKTPVIIEKIYPYYVKAPSDSN
SKPIKQLLSENNFMNITIILYRDNATKSNSEWWVLNLTGNRIYEQQSQALELVVFNDKVS
PPSLGFLAGYGIMGLYASVVLVIGKFVREFFSGISHSIMFEELPNVDRILKLCTDIFLVR
ETGELELEEDLYAKLIFLYRSPETMIKWTREKTN
NT seq
8565 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggaggtggtgtgtgggcttgtcttcaggctgctgctgcctatctgcctggca
gtagcatgtgcattccggtacaatgggctctcctttgtctaccttatctacctcttgctc
attcctctattctcagaaccaacaaaagccacaatgcaaggacacacaggacggttgttg
aagtctctgtgcctcaccagcctctccttcctgctgctgcacatcattttccacatcacg
ttggccagccttgaagctcagcaccgcattgcacctggttacaactgctcaacgtgggaa
aagacatttcgacagattggctttgaaagcttaaaaggagccgatgccggcaatggaatc
agagtgtttgtacctgacatcggcatgttcattgcgagtctggccatctggctcatctgc
agaaatatcgttcagaaaccagtgacggaagatgcggcacaatataatccagagttcgag
aatgaagaattggctggaggagagaaagtggatccagaagaggcgctgatttacgacgag
gaatttgatggaggtgatggtgccgagggggagctggaagaaagcaccaaactaaaactg
ttccgcaggttcgcctccgcggcatccaagctcaaggagttcattggcaacatgattacc
accgcgggaaaggtggttgtgaccattctactgggctcctcaggtatgatgctgccatct
ttgacgtcgtctgtatatttttttgtgtttctgggtctgtgcacctggtggtcctggtgc
cggacattcgacccattgttgttcagctgcctctgtgttctgctggccattttcacggct
ggacacctgattggactctatttgtaccagttccagttcttccaagaagcagtaccaccc
aatgactactacgcaaggttgtttggtatcaaatcagtcattcaaacagactgttccagt
acttggaagatcatagtaaacccagagttgtcatggtaccaccacgccaaccccatcctc
ctgctggtgatgtattacacgctggcaactcttatccggatctggctacaagaacccctg
gtgcaggaggacaagaccaaggaagaggacagagccctggcctgtagccccatccagatc
acggctgagaggaggcggagcctgtggtacgccacccattacccaaccgatgagagaaaa
cttttatccatgacccaagatgactacaagccatctgatggcctgctggtgaccgtgaat
ggcaaccccgtggactaccacaccatccaccccagcctgcctgtggagaacggccctgcc
aaggctgacctatactcaacaccccaatatcgctgggagccatccggtgaatcctcagaa
aagaaagaggaagaagaggatgagaaagaagaatttgaagaggaaaggagccacgaggaa
aaaagaagtgtgaaagttcatgccatggtctcagtgttccagtttattatgaagcaaagt
tacatctgtgccctcatcgcgatgatggcttggagcatcacctatcacagctggttgact
tttgtgctgctcatttggtcctgcactctctggatgattcgcaacaggagaaaatatgcc
atgatcagctctcctttcatggttgtgtatggaaatctactgctggtattgcagtatata
tggagttttgaacttccagaaattaagaaggttccaggatttttagaaaagaaagatcca
ggagaacttgcttcaaagattctcttcaccatcactttctggctcctgctaaggcagcac
ctcacagagcaaaaggcccttcgagaaaaggaagcccttttagctgaagtcaaaattgga
agtgaggaaaatgaggagaaagacgaggaccttcaagacattccagtggaaggggagcct
caagggaaggaggaggaagaggcagcaaaggaggagaagccagagagaaagaaggaggtg
gaggaggaggaggtggaggaggaagacgaccaggacatcatgaaggtgctgggcaacctg
gtggtggccatgttcatcaagtactggatctatgtgtgcgggggcatgttcttcttcgtc
agcttcgagggcaagattgtgatgtacaaaatcatctacatggtgctgttcctcttctgt
gtggccttgtaccaggtgcactatgaatggtggaggaaaattctgaaatatttctggatg
tcggtggttatttacactatgctggtgctcatctttatatacacatatcagtttgaaaac
ttcccaggcctgtggcaaaatatgactggattgaaaaaagaaaagcttgaggaccttggt
ttaaagcagttcacagtggctgaactcttcacccgcattttcatcccgacctccttcctg
ctggtgtgcatcctgcacctgcactatttccacgaccgcttcctggaactcacagacctc
aagtccatccccagcaaagaagacagcaccatctacagattggcccacccagaaggaagt
cttccagaccttgcagccatgaacttcactgccagcctggagaagccagaagtgaagaag
ttgactgaacttgcagaggagaagccagaggggtgcttggagaagggtgagcctgggaaa
gacagcgaggagtcggaggtggaggaagatgaagaggaggaatccgaggaggaggaagaa
acatcagatctaaagaacaaatggcatctggtgattgaccgcctcactgtgctcttcttg
aaattcctggagtattttcacaatctgcaggtgttcatgtggtggattctagagctgcac
atcatcaaaattgtttcatcgtacattatctgggtttccgtgaaggaggtctctctgttc
aactatgtatttttgatttcatgggcatttgctctaccgtatgccaagctacgccgcctg
gcttccagtgtctgcactgtctggacgtgtgtgatcatcgtctgcaaaatgttgtaccag
cttcagaccattaagcccgagaacttttctgttaactgttccttgccaaatgaaaatcaa
acgaacataccccttcaggatttgaacaagtctctgctctacagcgctcccattgatccg
acagagtgggttggcctcagaaagtcttctcctttgcttgtctacctgaggaataatctc
ctgatgctagctattctggcctttgaagtcaccatttatcgccatcaggaatactaccgg
ggtcgaaataacctcacagctcctgtgtctaaaactatttttcacgacatcacaaggctg
catctggatgatgggctgattaactgtgccaagtatttcatcaactatttcttctacaaa
tttggtctggagacctgtttcctaatgtcagtgaacgtgatcggtcagcggatggatttc
tacgccatgattcacgcctgctggctcatcgcggtcttgtatcgccgcagaagaaaagcc
atcgctgaggtctggcccaaatactgctgcttcctggcctgcatcatcaccttccagtac
ttcatctgcattggcatcccccctgccccctgccgagattacccatggaggttcaaagat
gccaacttcaatgacaacatcatcaagtggctgtacttcccagacttcatcgtgcggccc
aaccccgtgttccttgtctatgatttcatgctgctcctctgtgcctccctgcaacggcag
atttttgaggatgaaaacaaggctgctgtacgaatcatggccggcgacaacgtcgagatt
tgcatgaacctcgatgcggcctcgttcagccaacataaccctgtaccggatttcattcac
tgcagatcttacttagacatgtccaaagtggtcatcttcagctacctcttctggttcgtc
ctgacgatcatcttcatcaccgggacaaccaggatcagcatcttctgcatgggatacttg
gtggcctgtttctacttcctgctcttcgggggtgacttgcttctgaagcccatcaagagc
atcctgcgctactgggactggctgatcgcatacaacgtgttcgtgatcaccatgaaaaat
atcttgtcgataggagcttgtgggtacattggaacgctggtgaaaaacagctgctggttg
atccaagctttcagcctggcctgcacagtcaaaggctataaaatgcctgatgatgactca
tcttgcaaactaccgagtggtgaagcaggaattatttgggatagcatatgctttgccttc
ctcctgcttcaaagaagagtgttcatgagttattacttcctacatgtcgtggctgacatt
aaagcctcacagatcctggcatcaagaggggctgaacttttccaggccacaattgtaaag
gctgtaaaggcaagaattgaggaagagaaaaagtccatggatcagcttaaaagacagatg
gatcgcatcaaggccaggcaacagaaatacaaaaagggtaaggagaggatgctgagtttg
acccaggaatcaggggaaggccaggacatccaaaaactctctgaagaggatgatgaaaga
gaagcagaaaaacagaaagccaagggcaaaaaaaagcagtggtggcggccttgggttgat
catgcttccatggtcaggagtggagattattatttgtttgaaacggatagtgaagaagag
gaagaggaagagttaaagaaggaagatgaagaaccaccccggaagtcagctttccagaga
gctattgggaagtttgcgtcagccattttagccttgccaaagtctgtcattaaacttccc
aaaactattcttcagtatttaatcagagctgcaaagtttgtttaccaagcctggatcacc
gaccctaaaactgccctccgacagagacgcaaagagaaaaagagatccgcaagagaagac
cagaaacgaaggcggaaaggctctggggacggtgcggtggaatgggaagaccgagaggat
gaacctgtcaaaaagaaatccgatggcccagacaacatcatcaaaaggatatttaacatc
ttgaagttcacctgggtgctgtttctggcgaccgtggacagtttcaccacatggctgaac
tccatctccagagagcacattgacatatccacagttctgagaattgagagatgcatgctg
accagggaaatcaagaagggcaatgttccgacgcgggagagcatccacatgtactatcag
aaccacatcatgaacctttccagagagtcaggactggataccattgaccaacgtcctgga
gctgccgcaggggcacagccagcgcacaggatggatagcttagattcacatgacagtatc
tccagctgctacactgaagcaaccatgctgttctcaaggcagtctacccttgatgattta
gatggaccagacacggttcccaaaacaagtgagcgcgcacggcctaggctccgtaaaatg
ttcagcatggatgtgtcctcctcatctgctgacagtggcagtttagcgtcaagcgagccc
acgcagtgcaccatgctgtactcacgccagggaacgacggaaaccatcgaggaggtggag
gctgagcaggaggaggaggtgctgggagcagcaccccagcccggggatgctgaggaggag
gaggacgaggaggaggaggaggagggagtagaggaggcagaggaagagagggaggaggaa
gaggagttccccgtgggggctgaggactgcagcctcacgccggaggaggagctgccacag
ttcagcacggaggacggggatgtggaggccccaccctcctacagcaaggccgtgagcttc
gagcacctgtccttcggctcacaggacgactccggggccaagaaccacatggtggtgagc
cccgacgacagccgcaccgacaagctggagtccagcatcctccccgccctgacgcacgag
ctgaccgccagcgagctgctgctgaacaagatgttccacgacgatgagcttgaagagtcg
gagaagttctacgtgggccagccccggttcctgcttctcttctatgccatgtacaacacg
ctggtggcacgctccgagatggtgtgctacttcgtgatcatcctcaaccacatggtctct
gcctccatgatcaccctcctgctccccattctgatcttcctttgggccatgctgtctgta
cccagacccagccggcgcttctggatgatggccattgtctacactgaggtggcaattgta
gtcaagtatttcttccaatttgggttctttccctggaataagaacgtggaattgaacaaa
gataaaccgtaccaccccccaaatatcataggagtggaaaagaaggaaggttacgtcctt
tacgacctcattcagctcctggctctgttcttccaccgctcaatattgaagtgccatggc
ctctgggatgaagatgacattgttgaaagtggcaccgacaaggacgagtccgacgatgag
ctctcccttggtcatggccgaaggggctcctgcgactcactgaagtccatcaacctggct
gcctcggtggagtcggtgcacgtgaccttccccgagcagcagatggccgtacgcaggaag
cggtctggtggcagctcccagatctccccaacatccagcttttcttcaaacaggtccaga
agagggagtacaagcacccggaacagtagccaaaaaggcagtgttttgagcattaagcaa
aaaagcaaaagggaactctacatggaaaagcttcaggaacatttaatcaaagcgaaagcc
tttaccataaagaagactctgcaaatatacgtgcccatcagacaattcttctatgacctc
atccacccagactacagtgccgtgaccgatgtctacgtgctcatgttcctagctgacacg
gtggacttcatcatcattgtctttggcttttgggcctttgggaaacactcagcagcagca
gacatcacctcttccctctcggaggaccaggtcccgggtccctttttggtgatggttctg
attcagtttggaaccatggtggtggatcgagcactctacctcaggaagacggtattgggc
aaggtcatcttccaggtcatccttgtgtttggaattcacttctggatgttcttcatctta
cctggcgtgactgagaggaaattcagccagaacctggttgcccagctttggtactttgtg
aagtgtgtctactttggattgtccgcctaccagatccgttgtggctaccccacgcgtgtc
ctcgggaacttccttaccaagagctacaactacgtcaacctcttcctgtttcaggggttc
cgcctcgtcccgtttctgaccgagctgagggcagtgatggactgggtgtggacagacacg
actctgagcctctccagctggatctgcgtggaggacatctatgctcacatattcatcctc
aagtgttggcgggagtcggaaaagaggtacccacagccccggggccagaagaagaagaag
gtggtgaagtacggcatgggaggcatgatcatcgtcctgctcatttgcatcgtctggttt
cctctcctttttatgtctttgatcaaatccgtcgcaggggtcatcaaccagcccctggac
gtgtctgtcacaattaccctgggagggtatcagcctattttcaccatgagtgcccagcaa
agccaactgaaagttatgaacaagacaacgtttgataagtttgtaaaagcttttactaag
gacactggtgctatgcaatttctggaaaattatgaaaaagaagacataacagtagcagaa
ctggaaggaaactcaaattctttgtggaccatcagccctcccagtaagcggaaaatgata
caagagctcatggacctcaagagtagcttctctgttgttttttcatggagtattcagaga
aacatgagtctgggtgcaaaagcagagatagccacagataagctttcctttgctcttgaa
aatgtcacgcgagagaatatagccaagatgatagctggcaatgacacagagagttcaaaa
acgcccgtgataatagaaaagatctacccgtattatgtgaaagcacctagtgattctaac
tcaaaacctataaagcaactgttatctgaaaataatttcatgaacatcaccattattttg
tacagagacaatgcaactaaatctaacagtgagtggtgggttctcaacctgactggaaat
aggatctatgagcagcagtcccaggccttggaactggtggtcttcaatgacaaagtcagc
cccccaagtctggggttcctagctggctatggtatcatgggattgtacgcttcggtggtc
ctcgtgattgggaaatttgtccgtgaattcttcagcgggatttcgcactccatcatgttt
gaggagctcccaaatgtggatcggattttgaagctatgcacagacatttttttagttcgg
gagacaggggaactggaactagaagaagatctctatgccaaattaatattcctctaccga
tcaccggagaccatgatcaaatggaccagagagaaaacaaactga
DBGET
integrated database retrieval system
