Oryctolagus cuniculus (rabbit): 100352012
Help
Entry
100352012 CDS
T03373
Name
(RefSeq) vacuolar protein sorting-associated protein VTA1 homolog isoform X1
KO
K12199
vacuolar protein sorting-associated protein VTA1
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100352012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocu04131
]
100352012
Membrane trafficking [BR:
ocu04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
100352012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vta1
Vta1_C
DAG_kinase_N
Motif
Other DBs
NCBI-GeneID:
100352012
NCBI-ProteinID:
XP_002714896
Ensembl:
ENSOCUG00000002554
LinkDB
All DBs
Position
12:complement(23170764..23277522)
Genome browser
AA seq
307 aa
AA seq
DB search
MAALAPLPPLPPQFKSIQHHLRTAQEHDKRDPVVAYYCRLYAMQTGMKIDSKTPECRKFL
SKLMDQLEALKKQLGDNEAITQEIVGSAHLENYALKMFLYADNEDRAGRFHKNMIKSFYT
ASLLIDVITVFGELTDENVKHRKYARWKATYIHNCLKNGETPQAGPVGIEEDNDGEENED
AGVASLPTQPPQPSSSSAFDPGSMPSGSYSGIQIPPGAHAPANTPAEVPHGTGVTSNTIQ
PAPQTIPAIDPALFSTVSQGDIRLTPEDFARAQKYCKYAGSALQYEDVSTAVQNLQKALK
LLTTGRE
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgctggctccgctgcccccgctccccccacagtttaagagcatacagcatcac
ctgaggacggctcaggagcatgacaagcgggacccggtggtggcctattactgtcggtta
tatgccatgcaaactggaatgaagattgatagtaaaactcctgaatgtcgtaaattttta
tcaaaattaatggatcagttagaagctcttaagaaacagttgggtgataatgaagctatt
actcaagaaatagttggctctgcccatttggagaattatgctttgaaaatgtttttatat
gcagacaatgaagatcgtgctgggcgatttcacaaaaacatgatcaagtccttctatact
gcaagtcttttaatagatgtcataacagtgtttggagaactcactgatgaaaatgtgaaa
cacagaaagtatgcaaggtggaaggcaacatatatccataattgcttaaagaatggggag
actcctcaagcaggccctgttggaattgaagaagataatgatggtgaagaaaatgaagat
gccggagtagcctctttgcccactcaaccacctcagccatcatcatcctcagcatttgac
ccaggcagcatgccatcaggcagctatagtggcatacagattcctccgggtgcacacgct
ccagccaacacaccagcggaagtgcctcatggcacaggtgtaacaagtaatactatccaa
cctgctccacagactattccagccattgatcctgcacttttcagtacagtttcccagggc
gatatccgcctcacccctgaggactttgcgagagctcagaagtactgcaaatatgccggc
agtgctttgcaatatgaagatgtaagcactgccgttcagaatctacagaaagccctcaag
ttactgacgaccggcagagaatga
DBGET
integrated database retrieval system
