KEGG   Oryctolagus cuniculus (rabbit): 100352088
Entry
100352088         CDS       T03373                                 
Name
(RefSeq) methylosome protein 50
  KO
K13221  methylosome protein 50
Organism
ocu  Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ocu03041]
    100352088
Spliceosome [BR:ocu03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    100352088
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_RIG_2nd WDR55 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_HPS5 NBCH_WD40 WD40_RFWD3 WD40_MABP1-WDR62_1st TAF1C_beta-prop WD_LRWD1 Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_NWD2_C Beta-prop_WDR11_2nd Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 100352088
NCBI-ProteinID: XP_002715823
Ensembl: ENSOCUG00000007801
LinkDB
Position
13:53011514..53020102
AA seq 342 aa
MRKETPPPPVPPAAREWNLPPNAPACMERQLEAARYRSDGALLLGASSLSGRCWAGSLWL
FKDPRAAPNEGFCSAGVQTEAGVADLTWVGDRGILVASDSGAVELWELDENETLIVSKFC
KYEHDDIVSTISVLSSGTQAVSGGKDFCIKVWDLAQQVVLNSYRAHAGQVTCVAASPHKD
SVFLSCSEDNRILLWDTRCPKPASQMGCNASGYLATSLAWHPQQSEVFVFGDENGTVSLV
DTKSAGCALSSAVHSQCVTGLVFSPHSAPFLASLSEDCSLAVLDSSLSEVFRSRAHRDFV
RDATWSPLNHSLLTTVGWDHQVIHHAVPTEPLPAPGPESVAE
NT seq 1029 nt   +upstreamnt  +downstreamnt
atgcggaaggaaactccgcctcctccagtgcccccggcggcccgcgagtggaaccttccc
cctaatgcgcccgcctgcatggaacggcagttggaggctgcgcggtaccggtctgatggg
gcgctgctcctcggggcctccagcctgagtggccgctgctgggccggctccctctggctt
ttcaaggaccctcgtgcggcccccaacgagggcttctgttccgctggcgtccagacagag
gccggagtggcagacctcacgtgggtgggggacagagggatcctcgtggcttctgattca
ggtgcggttgaactgtgggagctggatgagaatgagacacttatagtcagcaagttctgc
aagtacgagcatgatgacatcgtgtctaccatcagtgtcctgagctccggcacacaggct
gtcagtggtggcaaagacttctgcatcaaagtctgggaccttgctcagcaggtggtgctg
aattcataccgagctcacgctgggcaggtcacctgtgttgctgcctctccccataaggac
tccgtgtttctttcgtgcagtgaggacaatagaattttactgtgggatacccgctgtccc
aagccggcatcacagatgggctgcaatgcctctggctaccttgctacttcactggcttgg
catcctcagcaaagtgaagtctttgtctttggtgatgagaatgggactgtctctcttgtg
gacaccaagagtgcgggctgtgcgctcagttcagctgtgcactcgcagtgtgtcactggg
ctggtgttctcgccccacagtgcgcccttcctggcctctctcagcgaagactgctcgctt
gctgtgctggactccagcctttccgaggtgtttaggagccgggcccacagagactttgtg
agagatgctacttggtccccgctcaatcactccctccttaccacggtgggctgggaccat
caagtcatccaccatgctgtgcccacagagcctctcccagccccgggacctgagagtgta
gccgagtag

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