Oryctolagus cuniculus (rabbit): 100352116
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Entry
100352116 CDS
T03373
Name
(RefSeq) syntaxin-17
KO
K08491
syntaxin 17
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04130
SNARE interactions in vesicular transport
ocu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
100352116
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100352116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocu04131
]
100352116
Membrane trafficking [BR:
ocu04131
]
SNARE
Syntaxin (Qa)
Stx-sER
100352116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
IncD
Phage_holin_3_6
ThrE
C19orf12
Motif
Other DBs
NCBI-GeneID:
100352116
NCBI-ProteinID:
XP_002707992
Ensembl:
ENSOCUG00000004217
UniProt:
G1SLB3
LinkDB
All DBs
Position
1:complement(27349612..27442026)
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AA seq
303 aa
AA seq
DB search
MMSEDEEKVKLRRLEPAIQKFIKIVIPTDLERLRKHQINIEKYQRCRIWDKLHEEHINAG
RTVQQLRSNIREMEKLCLKVRKDDLILLKRMIDPVKEEAAAATAEFLQLHLESVEELKKQ
FSDEETLLQPSLTRSMTIGGEFHTTEAEASCQSLTQIYALPEIPRDQNAAESWETLEADL
IELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNLGKAAKYKLAALPVAGALI
GGVVGGPIGLLAGFKVAGIAAALGGGVLGFTGGKLIQRKKQKMMEKLTSSCPDLPSQTDK
KCS
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgaagatgaagaaaaagtgaaattacgccgtcttgagccagctattcagaaa
ttcattaaaatagtaatcccgacagacctggaaagattaagaaagcaccagataaatatt
gagaagtatcaaaggtgcagaatctgggacaagttgcacgaagaacatatcaatgcgggg
cgtacagttcagcaactccgctccaatattagggaaatggagaaactttgtttgaaagtc
cgaaaggatgacctaatacttttgaagagaatgatagatccagttaaagaggaagcagca
gcagcaacagcagaatttctgcaactccatttggaatctgtggaagagcttaagaaacaa
tttagtgatgaagaaactttattacagccttctttaaccagatccatgactattggtgga
gaatttcacactactgaggctgaagctagctgtcagagtttgactcagatatatgcattg
cctgaaattcctcgagatcaaaatgctgcagaatcatgggaaaccttggaagcggattta
attgaacttagccaactggtcactgatttctctctcctagtgaattctcagcaggagaag
attgacagcattgcagaccatgtcaacagtgctgctgtgaatgttgaagagggaaccaaa
aacttggggaaggctgcaaaatacaagctggcagctctgcctgtggcaggtgcactcatc
ggaggagtggtggggggtccgattggcctccttgcaggcttcaaagtggcaggaattgca
gctgcacttggtggtggggtgttgggcttcacaggtggaaaattgatacaaaggaagaaa
cagaaaatgatggagaagctcacttccagctgtccagatcttccgagccaaactgacaaa
aaatgcagttaa
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