Oryctolagus cuniculus (rabbit): 100352258
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Entry
100352258 CDS
T03373
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X1
KO
K10570
DNA excision repair protein ERCC-8
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03420
Nucleotide excision repair
ocu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100352258
09124 Replication and repair
03420 Nucleotide excision repair
100352258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocu04121
]
100352258
03400 DNA repair and recombination proteins [BR:
ocu03400
]
100352258
Ubiquitin system [BR:
ocu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
100352258
DNA repair and recombination proteins [BR:
ocu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
100352258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WDR55
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
Beta-prop_EML
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_RFWD3
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_RIG_1st
Beta-prop_Nup120_160
Beta-prop_WDR11_1st
Beta-prop_NUP159_NUP214
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
100352258
NCBI-ProteinID:
XP_002714099
Ensembl:
ENSOCUG00000004519
UniProt:
G1SLZ1
LinkDB
All DBs
Position
11:12588399..12666493
Genome browser
AA seq
396 aa
AA seq
DB search
MLGFLSARQVGLEDPVRLRRAESTRRVLGLELNKDRDVERIHGSGVNTLDIEPVEGRYML
SGGSDGVIVLYDLENSSRQPFYTCKAVCSIGRNHPDVHKYSVETVQWYPHDTGMFTSSSF
DKTLKVWDTNTLQTADVFNFEETVYSHHMSPVATRHCLVAVGTRGPKVQLCDLKSGSCSH
ILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGEKSQAVESA
NTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNDSRKGLKFAVS
CGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKNVDCCVFQSNFQELYSGSRDCNILA
WVPSLSEPVPDDDEAATKTQLNPAFEDAWSSSDEEG
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgctggggtttttgtccgcgcgacaggtgggtttagaggaccctgttcgcctccggaga
gcagagtctacacggagggttttgggactggagttaaacaaagacagagatgttgaaaga
atccatggcagtggagttaacacccttgacattgaacctgttgaaggacgatacatgtta
tcaggtggatcagatggtgtgattgtgctttatgaccttgagaactccagcagacagcct
ttttacacctgtaaggcggtgtgttccattggcagaaaccatcctgatgttcacaaatac
agtgtggagacggtacagtggtatcctcacgatactggcatgttcacatcaagttcgttt
gacaaaactctgaaagtatgggatacaaatacattacaaactgcagatgtatttaatttt
gaggaaacagtttatagccatcacatgtctccagtcgccaccaggcattgcttggtagca
gttggtactagagggccgaaagtacaactttgtgacttaaagtcgggatcctgttctcac
attctacagggtcacagacaggaaatactggcagtttcctggtcaccacgctatgattat
atcttagcaactgcaagtgctgacagcagagtaaagttatgggatgtgaggagagcatcg
ggatgtctgattactcttgatcagcataatggggaaaagtcacaagctgttgaatcagca
aacactgctcataatgggaaagttaatggcttatgttttacaagtgatggacttcacctc
ctcactgttggtacagataatcgaatgaggctctggaatagttccaacggagaaaacaca
ctagtgaactatggaaaagtttgtaatgacagtagaaaaggattgaaattcgctgtctcc
tgcggctgcagttcagaatttgtttttgtaccatatggtagcaccattgctgtttataca
gtttactcaggagaacagataactatgcttaagggacattataaaaatgttgactgctgt
gtatttcaatctaatttccaggaactttatagtggtagcagagactgcaatattcttgct
tgggtgccatctttaagtgaaccagttccagatgatgatgaggctgcaaccaaaacacaa
ctgaatccagcgtttgaagatgcttggagcagcagtgatgaggaaggatag
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