KEGG   Oryctolagus cuniculus (rabbit): 100352600
Entry
100352600         CDS       T03373                                 
Name
(RefSeq) nucleoporin p54 isoform X1
  KO
K14308  nuclear pore complex protein Nup54
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03013  Nucleocytoplasmic transport
ocu05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100352600
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100352600
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ocu03019]
    100352600
Messenger RNA biogenesis [BR:ocu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     100352600
SSDB
Motif
Pfam: Nup54 Nup54_C Phage_tail_terminator_7 XhlA
Other DBs
NCBI-GeneID: 100352600
NCBI-ProteinID: XP_002717151
Ensembl: ENSOCUG00000003379
UniProt: G1SJK9
LinkDB
Position
15:71148494..71173578
AA seq 506 aa
MAFNFGAPSGTSGSAAATAAPTGGFGGFGTTSTTAGSAFSFSAPANTGTTGLFTQNKGFG
FGTGFGTTTGTSTGLGTGLGTGLGFGGFNTQQQQQQSTLGGLFSQPTQAPAQSNQLINTA
SALSAPTLLGDERDAILAKWNQLQAFWGAGKGYFNNNIPPVEFTQENPFCRFKAVGYSCM
PNNKDEDGLVVLVFIKKETDIRSQQQQLVESLHKVLGGNQTLTVNVEGIKTLPDDQTEVV
IYVVERSPNGTSRRVPATTLYAHFEQVSIKTQLQQLGVTLSMTRTELSPAQIKQLLQNPP
AGVDPIIWEQAKVDNPDSEKLIPVPMVGFRELLRRLKVQDQMTKQHQTRLDIISEDISEL
QKNQTTTMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQCEL
NAPTQFKGRLNELMSQIRMQNHFGAVKTEERYYIDADLLREIKQHLKQQQEGLSHLISII
KDDLEDIKLVEHGLNETIHIRGGVFS
NT seq 1521 nt   +upstreamnt  +downstreamnt
atggctttcaattttggggctccctcgggcacgtcgggctccgctgcagccaccgcggca
cctacgggtgggtttggaggatttggcacaacatctacaactgcaggttctgcgttcagt
ttttctgctccagctaacacaggcaccacaggactgtttactcagaacaaaggttttgga
tttggtactggttttggcacaaccaccggaactagcactggtttaggtactggcttggga
actggactgggatttggaggatttaatacgcagcagcagcagcagcagtctacattaggt
ggtctcttcagtcagcctacacaagctcctgcccagtccaaccagctgataaatactgca
agtgctctttctgctccaacgttattgggagatgagagagatgctattttggcaaaatgg
aatcaactgcaggccttttggggagcaggaaaaggatatttcaacaataacattccaccc
gtggagttcacacaagaaaatcccttttgccgatttaaggcagtaggttatagttgtatg
cccaataataaagatgaagatggcctagtcgttttagttttcatcaaaaaagaaacagat
attcgaagtcaacaacagcagttggtagaatcattgcataaagttttgggaggaaatcag
acccttactgtaaacgtagagggtattaaaacgttgccagacgatcagacagaagttgtc
atttatgttgttgaacgttctccaaatggtacttcaagaagagttccagctacgactctc
tatgcccattttgaacaagtcagtataaagacacaattgcagcaactgggtgtaaccctt
tctatgactagaacagaactctctcctgcgcagatcaaacagctcttacagaatcctcct
gctggtgttgatcctattatctgggagcaagccaaggtggataaccccgattctgaaaag
ttaattcctgtaccaatggtgggtttcagagaacttcttcgaagattgaaagttcaagat
cagatgactaagcagcaccagaccagattagatatcatatctgaagatatcagtgagcta
caaaagaatcagactacaacaatggccaagattgcacaatataagaggaaactcatggat
ctttctcatcgaacattgcaggtcctaatcaaacaggaaattcaaaggaagagtggttat
gccattcaggctgatgaagagcagttgcgagttcagctggatacgattcagtgtgaactg
aacgcacctacccagtttaagggccgacttaatgaactaatgtcccaaatcagaatgcag
aatcattttggagcagtgaaaactgaagaaagatactacatagatgcagatctgctacga
gaaatcaagcaacacttgaaacaacagcaggaaggcctgagccacttgattagcatcatt
aaagatgacctggaagacatcaaattggtcgaacacggattgaatgaaaccatccacatc
agaggtggtgttttcagttga

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