Oryctolagus cuniculus (rabbit): 100352600
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Entry
100352600 CDS
T03373
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03013
Nucleocytoplasmic transport
ocu05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100352600
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100352600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100352600
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100352600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Phage_tail_terminator_7
XhlA
Motif
Other DBs
NCBI-GeneID:
100352600
NCBI-ProteinID:
XP_002717151
Ensembl:
ENSOCUG00000003379
UniProt:
G1SJK9
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All DBs
Position
15:71148494..71173578
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AA seq
506 aa
AA seq
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MAFNFGAPSGTSGSAAATAAPTGGFGGFGTTSTTAGSAFSFSAPANTGTTGLFTQNKGFG
FGTGFGTTTGTSTGLGTGLGTGLGFGGFNTQQQQQQSTLGGLFSQPTQAPAQSNQLINTA
SALSAPTLLGDERDAILAKWNQLQAFWGAGKGYFNNNIPPVEFTQENPFCRFKAVGYSCM
PNNKDEDGLVVLVFIKKETDIRSQQQQLVESLHKVLGGNQTLTVNVEGIKTLPDDQTEVV
IYVVERSPNGTSRRVPATTLYAHFEQVSIKTQLQQLGVTLSMTRTELSPAQIKQLLQNPP
AGVDPIIWEQAKVDNPDSEKLIPVPMVGFRELLRRLKVQDQMTKQHQTRLDIISEDISEL
QKNQTTTMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQCEL
NAPTQFKGRLNELMSQIRMQNHFGAVKTEERYYIDADLLREIKQHLKQQQEGLSHLISII
KDDLEDIKLVEHGLNETIHIRGGVFS
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggctttcaattttggggctccctcgggcacgtcgggctccgctgcagccaccgcggca
cctacgggtgggtttggaggatttggcacaacatctacaactgcaggttctgcgttcagt
ttttctgctccagctaacacaggcaccacaggactgtttactcagaacaaaggttttgga
tttggtactggttttggcacaaccaccggaactagcactggtttaggtactggcttggga
actggactgggatttggaggatttaatacgcagcagcagcagcagcagtctacattaggt
ggtctcttcagtcagcctacacaagctcctgcccagtccaaccagctgataaatactgca
agtgctctttctgctccaacgttattgggagatgagagagatgctattttggcaaaatgg
aatcaactgcaggccttttggggagcaggaaaaggatatttcaacaataacattccaccc
gtggagttcacacaagaaaatcccttttgccgatttaaggcagtaggttatagttgtatg
cccaataataaagatgaagatggcctagtcgttttagttttcatcaaaaaagaaacagat
attcgaagtcaacaacagcagttggtagaatcattgcataaagttttgggaggaaatcag
acccttactgtaaacgtagagggtattaaaacgttgccagacgatcagacagaagttgtc
atttatgttgttgaacgttctccaaatggtacttcaagaagagttccagctacgactctc
tatgcccattttgaacaagtcagtataaagacacaattgcagcaactgggtgtaaccctt
tctatgactagaacagaactctctcctgcgcagatcaaacagctcttacagaatcctcct
gctggtgttgatcctattatctgggagcaagccaaggtggataaccccgattctgaaaag
ttaattcctgtaccaatggtgggtttcagagaacttcttcgaagattgaaagttcaagat
cagatgactaagcagcaccagaccagattagatatcatatctgaagatatcagtgagcta
caaaagaatcagactacaacaatggccaagattgcacaatataagaggaaactcatggat
ctttctcatcgaacattgcaggtcctaatcaaacaggaaattcaaaggaagagtggttat
gccattcaggctgatgaagagcagttgcgagttcagctggatacgattcagtgtgaactg
aacgcacctacccagtttaagggccgacttaatgaactaatgtcccaaatcagaatgcag
aatcattttggagcagtgaaaactgaagaaagatactacatagatgcagatctgctacga
gaaatcaagcaacacttgaaacaacagcaggaaggcctgagccacttgattagcatcatt
aaagatgacctggaagacatcaaattggtcgaacacggattgaatgaaaccatccacatc
agaggtggtgttttcagttga
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