Oryctolagus cuniculus (rabbit): 100352661
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Entry
100352661 CDS
T03373
Symbol
SMO
Name
(RefSeq) smoothened, frizzled class receptor
KO
K06226
smoothened
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04340
Hedgehog signaling pathway
ocu04360
Axon guidance
ocu05200
Pathways in cancer
ocu05205
Proteoglycans in cancer
ocu05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
100352661 (SMO)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100352661 (SMO)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100352661 (SMO)
05205 Proteoglycans in cancer
100352661 (SMO)
09162 Cancer: specific types
05217 Basal cell carcinoma
100352661 (SMO)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ocu04030
]
100352661 (SMO)
G protein-coupled receptors [BR:
ocu04030
]
Frizzled / Smoothened family
100352661 (SMO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Frizzled
Fz
Dicty_CAR
Motif
Other DBs
NCBI-GeneID:
100352661
NCBI-ProteinID:
XP_002712105
LinkDB
All DBs
Position
7:complement(15366399..15397639)
Genome browser
AA seq
1125 aa
AA seq
DB search
MPVHSPRTAWCPDSLSRGPNADSRASSLNVCPQNADRRREELKELPQSKKASRSWGTGPA
TRRHPRSLPARTRRQVRSPQAAGSDARSAAPSSRRPPRLLLQLRAPISTRVSPLGDPGGG
ERGPRVPPARAPRSAGEADVSAPPPQPPLPPLPPQSLLQPRRAGLARRGRCIPESGASRS
NKGAGESARRARGAAARSGGGGGWAAGWRGAEPGSWCRTPGSRLASPAGPGVDFSGGRRN
GAGERGCRGGPGLKTLWIAGRGRAELCVPARASAAQHGPRVPKLAKLGAEEPGRAERRWG
LGPGLAGRAGRLSRLHGPQSRACGRGAPGLLLSWRVCALAAGRPARGPELLLLGLLLLLG
APGRGAAWSGNATGPGPRGAGGSARRSAAATGPPPLLSRCGRAAHCEPLRYNVCLGSALP
YGATSTLLAGDSDSQEEAHGKLVLWSGLRNAPRCWAVIQPLLCAVYMPKCENDRVELPSR
TLCQATRGPCAIVERERGWPDFLRCTPDHFPEGCPNEVQNIKFNSSGQCEAPLVRTDNPK
SWYEDVEGCGIQCQNPLYTEAEHQDMHSYIAAFGAITGLCTLFTLATFVADWRNSNRYPA
VILFYVNACFFVGSIGWLAQFMDGARREIVCRADGTMRLGEPTSNETLSCVIIFVIVYYA
LMAGVVWFVVLTYAWHASFKALGTTYQPLSGKTSYFHLLTWSLPFVLTVAILAVAQVDGD
SVSGICFVGYKNYRYRAGFVLAPIGLVLIVGGYFLIRGVMTLFSIKSNHPGLLSEKAASK
INETMLRLGIFGFLAFGFVLITFSCHFYDFFNQAEWERSFRDYVLCQANVTIGLPTKKPI
PDCEIKNRPSLLVEKINLFAMFGTGISMSTWVWTKATLLIWRRTWCRLTGQSDDEPKRIK
KSKMIAKAFSKRRELLQNPGQELSFSMHTVSHDGPVAGLAFDLNEPSADVSSAWAQHVTK
MVARRGAILPQDVSVTPVATPVPPEEHANLWLVEAEISPELEKRMGRKKKRRKRKKEVCP
LGPPPELHRPAPAPSTSAVPRLPQLPRHKCLVAAGAWGTGEPSRQGAWTLVSSPFCPESS
LRQDPFLPSVPAPTTWAQGRRQGLGPMHSRTNLMEAELMDADSDF
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtgcatagcccacggacagcttggtgtccagactctctgagcagaggccccaac
gcggatagcagagcatcgtccttgaacgtgtgtcctcagaatgccgacaggcgcagagag
gagttgaaagagctgccccaaagcaagaaagcctcgcggagctggggaaccgggcccgcc
acccgcaggcatccccggtctctcccagcccgaaccaggagacaagttcgctccccgcag
gctgctggttcggacgcacgatccgcagccccatcatccaggcgcccgccaaggcttttg
ttgcaactccgagccccgatttccacccgcgtctctcccctcggcgacccgggcggcggc
gagcggggtccccgggtccccccagcgcgggcccctcggagcgccggggaagccgacgtt
agcgctcctcctccccagccgcccctcccgcccctcccgccccagtccctcctccagccc
cggcgggcgggcttggctcggcgcggccggtgcattccagagagcggggccagccgaagc
aacaaaggagccggggagtcggcacggagagctcggggggctgcggcgcgctcgggcgga
ggcggtggctgggccgctggctggcgcggggcggagccggggagctggtgccgtaccccc
ggctcgcgcctcgcctcccccgcggggccgggagtcgattttagcggtgggagaaggaat
ggtgctggggaaagggggtgcagggggggcccggggctgaagactttgtggattgccggg
cgagggcgagcggagctgtgtgtccccgcccgggcctccgccgcccaacatgggccccgg
gttccaaagttggcgaagttgggcgccgaggagccggggcgcgcggagcgtcgctggggg
ctcggcccgggactcgcggggcgcgcaggccgcctgagccgcctccacggcccccagagt
cgtgcgtgtggccgaggggcgccggggcttctgctgagttggcgggtttgcgctttggcc
gctggccgccctgcgcgggggccggagctcctgctgctggggctgctgctgctgctgggg
gccccgggccggggggcggcctggagcgggaacgcgacggggcctgggccgcgcggcgcc
ggcgggagcgcgaggaggagcgcggcggccacgggccctcctccgctgctgagccgctgc
ggccgggccgcgcactgcgagccgctgcgctacaacgtgtgcctgggctcggcgctgccc
tacggcgccacctccacgctgctggccggggattccgactcccaggaggaagcgcacggc
aagctggtgctctggtccggcctccggaatgccccccgctgctgggcagtgatccagcct
ctgctgtgtgccgtgtacatgcccaagtgtgagaatgaccgggtggagctgcccagccgc
accctctgccaggccacccggggcccctgcgccatcgtggagagggagcggggctggccc
gacttcctgcgctgcacccctgaccactttccggaaggctgcccgaacgaggtgcagaac
atcaagttcaacagttcgggccagtgcgaagcgcccttggtacggaccgacaaccccaag
agctggtacgaggacgtggagggctgcgggatccagtgtcagaacccgctctacaccgaa
gccgaacaccaggacatgcacagctacatcgccgccttcggcgccatcacaggcctctgc
acgctcttcaccctggccacgtttgtggctgactggcggaactcgaatcgctaccctgct
gtcatcctcttctatgtcaacgcatgtttcttcgtgggcagcatcggctggctggcccag
ttcatggacggggcccgccgggagatcgtctgtcgggcagatggcaccatgaggctgggg
gagcccacctccaatgagaccctgtcctgcgtcatcatctttgtcatcgtgtactatgcc
ctgatggctggcgtggtctggtttgtggtcctcacttacgcctggcacgcctccttcaaa
gcgctgggcaccacctaccagcctctctcgggcaagacctcctacttccacctgctgacg
tggtccctgcccttcgtcctcaccgtggccatccttgctgtggcccaggtggacggggac
tctgtgagcggcatctgtttcgtgggctacaagaactaccgataccgtgccggcttcgtg
ctggcccccatcggcctggtgctgatcgtgggaggctacttcctcatccgaggagtcatg
actttgttctccatcaagagcaaccaccccgggctgctgagcgagaaggcggcgagcaag
atcaacgagaccatgctgcgcctgggcattttcggtttcctggcttttggcttcgtgctc
attaccttcagctgccacttctacgacttcttcaaccaggctgagtgggagcgcagcttc
cgggactatgtgctgtgccaggccaatgtgaccatcgggctgcccaccaagaagcccatc
cccgactgcgagatcaagaatcgccccagcctgctggtggagaagatcaacctgtttgcc
atgttcggaactggcatttccatgagcacctgggtctggaccaaggccaccctgctcatc
tggaggcgcacctggtgcaggctgacggggcagagcgatgacgagcccaagaggatcaag
aagagcaagatgatcgccaaggccttctccaagcgccgcgagctgctgcagaacccgggc
caggagctctctttcagcatgcacaccgtctcccatgacgggcccgtggctggcttggcc
ttcgacctcaacgagccctccgccgacgtctcctccgcctgggcccagcacgtcaccaag
atggtggctcggagaggagccattctgccccaggacgtgtctgtcacgcccgtggcaacg
ccagtgccccctgaggaacacgccaacctgtggctggtggaggccgagatctccccggag
ctggagaagcgcatgggccggaagaagaagcggaggaagcggaagaaggaggtgtgcccg
ctggggccgcccccggagctgcaccggccggcgcccgccccttccaccagcgccgtcccg
cgcctgccgcagctgccccggcacaagtgcctggtggctgcaggtgcctggggcaccggg
gagccctcccgacagggagcctggaccctggtctccagccccttctgcccggagtccagt
ttgcggcaggatccgtttctgcccagcgtgccggcccccacgacctgggctcagggccgc
cgccagggcctggggcccatgcactcccgcaccaacctcatggaggcagagctcatggac
gcagactcggacttctga
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