Oryctolagus cuniculus (rabbit): 100352788
Help
Entry
100352788 CDS
T03373
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
100352788
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocu04990
]
100352788
Domain-containing proteins not elsewhere classified [BR:
ocu04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
100352788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
PLAC
TSP1_CCN
TSP1_spondin
ADAMTS_CR_3
Motif
Other DBs
NCBI-GeneID:
100352788
NCBI-ProteinID:
XP_051677733
LinkDB
All DBs
Position
17:complement(1685875..1806160)
Genome browser
AA seq
632 aa
AA seq
DB search
MMFVSCLILTLLRAQTAVAARPGGESIGCDDFLDSDKVVDKCGVCGGDNSGCQVVSGVFK
RPLTSLGYHRVLEIPQGATKINITEMHKSNNYLALRSRSGRSIINGNWAIDRPGKYEGGG
TMFTYKRPNEISSTAGESFLADGPTNEILDVYMIHQQPNPGVHYEYVIRGTNAIGPEMPP
LRRSGQPFNGQLVTDGRSQDEGEQERSEETEDVGSPNSPVPPAPQPPRRSPGHRWKQLGV
TECSATCGKGSRSPIFRCVHRSTQEEVPESYCDASVKPSPEAEPCNIFPCPAFWDIGEWS
QCSKTCGLGTQHRQVLCRQVYANRSLTVQPYRCQHLERPETASTCQLQICSEWHIRADWT
SCSVPCGVGQRTRDVKCMSNLGDVVADEECNVKLRPSDIENCDMGPCARSWFLTEWSERC
SAECGAGVRTRSVVCMASHVSSLPLEGCGDNRPAEATPCDNGPCTGKVEWFAGSWSQCSV
ECGPGTQQREVICVRKNAGSFEVLEPFACSFLERPASRQACHLKPCGATWFSTEWSVCSK
SCQGGFRVREVRCLSDNMTLSDRCDPQLKPEERETCNPQDCVPEVDENCKDQYYNCNVVV
QARLCVYSYYETACCASCTRGAQRQAGVLGSR
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttgtcagctgcctgatcctaaccttgctgcgcgctcagacagcagtcgccgcg
agacctgggggagagagcatcggctgtgacgacttcctggactccgacaaggtggtggac
aaatgtggggtgtgcggcggagacaactcgggctgccaggtggtgtctggtgtgttcaag
cggccgctcaccagcctgggctaccaccgcgtgctggagattccgcagggagccacgaaa
atcaacatcaccgagatgcacaagagcaacaactacctggccctgcgcagtcgctccggc
cgatccatcatcaacgggaactgggccatcgaccggcccgggaaatacgaaggcggaggg
accatgttcacctacaagcgtcccaatgagatctccagcacagccggagagtccttcctg
gccgacggccccaccaacgagatcttggatgtctacatgatccaccagcagcccaacccc
ggcgtgcactacgagtatgttatccggggcaccaacgccatcggcccggagatgccacca
ctcaggagatcagggcagcccttcaacggccagctggtgacagacggcaggagccaggac
gagggggagcaggagcggagcgaggagacggaggacgtgggcagccccaacagcccggtg
cccccagcgccgcagccaccgcggcggagcccgggccacaggtggaagcagctgggggtg
acggagtgctcagccacctgcgggaaaggatcgcggtcacccattttccgctgtgtgcac
agaagcacgcaggaggaggtccccgagagctactgcgacgccagcgtgaagccgagcccc
gaggccgagccgtgcaacatcttcccctgcccggccttctgggacatcggcgagtggtcg
cagtgcagcaagacctgtggcctaggcacgcagcaccggcaggtgctgtgccgccaggtg
tacgccaaccgcagcctcaccgtgcagccctaccggtgccagcacctggagcggcctgag
accgccagcacgtgccagctccagatctgcagcgagtggcacatccgggccgactggacc
tcgtgctcggtgccctgcggcgtggggcagaggacccgcgacgtgaagtgcatgagcaac
ctcggggacgtggtcgccgacgaggagtgcaacgtgaagctgcggcccagcgacatcgag
aactgcgacatggggccctgcgccaggagctggttcctcaccgagtggagcgagcggtgc
tcggcagagtgcggggctggagtgcggacacgctcggtggtgtgcatggccagccacgtc
agcagcctgcccctggagggctgtggggacaaccggccagccgaggccaccccgtgtgat
aatgggccctgcacgggcaaggtggagtggttcgcgggcagctggagccagtgctcggtg
gagtgcggcccggggacgcagcagagggaggtcatctgcgtgaggaagaacgcgggcagc
ttcgaggtgctggagcccttcgcgtgctccttcctggagcggcccgcgagccggcaggcc
tgccacctcaagccgtgtggcgccacgtggttcagcaccgagtggagcgtgtgctccaag
agctgccagggtggctttcgggtccgggaagtgcggtgcctgtcggacaacatgaccctg
agcgaccgctgcgaccctcagttgaaaccagaagagagagagacctgtaacccccaggac
tgcgtccctgaagttgatgagaactgcaaggaccagtactacaactgcaacgtggtggtg
caggcacgcctctgcgtctacagctactacgagaccgcctgctgcgcctcctgcacccgc
ggggcccagcggcaggccggcgtcctggggagcagatga
DBGET
integrated database retrieval system
