Oryctolagus cuniculus (rabbit): 100352833
Help
Entry
100352833 CDS
T03373
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100352833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100352833
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100352833
mRNA degradation factors
5'-3' decay
Decapping complex
100352833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
DUF445
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_HPS5
WDR55
EIF3I
Motif
Other DBs
NCBI-GeneID:
100352833
NCBI-ProteinID:
XP_002711670
Ensembl:
ENSOCUG00000006327
UniProt:
G1SQT2
LinkDB
All DBs
Position
5:23443001..23454237
Genome browser
AA seq
1404 aa
AA seq
DB search
MASCASIDIEDATQHLRDILKLDRPAAGPSVDSQRPSNAYNGDLNGLLVPDPLCSGDGTA
TAKPGVRTMPPINLQEKQVICLSGDDSSTCIGILAKEVEIVASSDSSISSKARGSNKVKI
QPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFTGSVA
DLAFAHLNSPQLACLDEAGNLFVWRLALVNGKIQEEILVHIQQPEGTPLNHFRRIIWCPF
IPEESEDCCEESSPTVALLHEDRAEVWDLDMLRSNHSTWPVDVSHIKQGFIVVKGHSTCL
SEGALSPDGTVLATASHDGYVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQ
DPEVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFSPDIFSSVSVPPSLKVCLDLSAEY
LILSDVQRKVLYVMELLQNQEEGRACFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLPA
EEENDSLGADGTQGAGAMESAAGVLIKLFCVHTKALQDVQIRFQPQLNPDVVAPLPTHTS
HEDFAFGESRSELGSEGLGSASPGSQPDLRRIVELPAPADFLSLSSETKPKLMTPDAFMT
PTASLQQITASPSSSSSSSSSSSSSSSSSSSSLTAVSAMSSTSAVEPSLPRPPEELTLSP
KLQLDGSLTVSGSSSLQASPRSLLPGLLPGPADKLTPKGPGQVPPAASALSLELQEVEPL
GLPQASPSRTRSPDVISSASTALSQDIPEIASEALSRGFGSSAPEGLEPDSMASAASALH
LLSPRPRPGPELGPQLGLDGGPGDGDRHSTPSLLEAALTQEAVTPDSQVWPTAPDITRET
CPTLAESPRNGLQEKHKSLAFHRPPYHLLQQHDSQDTSAEQSDHDDEVASLASASGGFGT
KVPPPRLPVKDWKTKGSPRASPKLKRKSKKDDGNSAVGSRLTEHQVAEPPEDWPALIWQQ
QRELAELRHNQEELLQRLCTQLEGLQSTVTGHVERALETRHEQEQRRLERALAEGQQRGG
QLQEQLTQQLSQALSSAVAGRLERSIRDEIKKTVPPCVSRSLEPVAGQLSNSVATKLTAV
EGSMKENISKLLKSKNLTDAIARAAADTLQGPMQAAYREAFQSVVLPAFEKSCQAMFQQI
NDSFRLGTQEYLQQLESHMKSRKAREQEAREPVLAQLRGLVSTLQSATEQMAATVSSSVR
AEVQHQLHVAVGSLQESILAQVQRIVKGEVSVALKEQQAAVTSSIMQAMRSAAGTPVPSA
HLDCQAQQAHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPAQVFGQPPCPLSQPV
LLSLIQQLASDLGTRTDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKLFQFLQVEP
HNSLGKAARRLSLMLHGLVTPSLP
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctgcgcgagcatcgacatcgaggacgccacgcagcacctgcgggacatcctc
aagctggaccggcccgcggcgggccccagtgtggacagccagcggccatccaacgcctat
aatggggacctcaatgggctcctggtcccagaccctctctgctcaggtgatggtactgca
acagccaagcctggtgtccggaccatgccacctattaacctgcaggagaaacaggtcatc
tgcctctcaggagatgacagctctacctgcattgggattttggccaaggaggtggagatt
gtggccagcagtgactctagtatttcgagcaaggcacgggggagcaacaaggtgaaaatc
cagcctgttgccaaatacgactgggagcagaagtactactatggcaacctgattgctgtg
tctaactccttcttggcctacgccattcgggctgccaacaatggctccgcgatggtgcgg
gtgatcagtgtcagcacttcagagcggactctgctgaagggcttcacaggcagcgtggct
gacctggccttcgcacacctcaactctccacagctggcctgcctggatgaggcaggcaac
ctgttcgtgtggcgcttggctctggttaatggcaaaattcaagaagagatcttggtccat
atccagcagccagagggcacgccactgaaccacttccgcaggatcatctggtgccccttc
atcccagaggagagtgaggactgctgtgaggaaagcagccctactgtggccctgctgcat
gaagaccgggctgaggtgtgggacctagacatgctccgctccaaccatagcacctggccc
gtggatgtcagccacatcaagcagggcttcattgtggtaaaaggccacagcacgtgccta
agtgaaggtgccctctcccctgatggaactgtcctggctactgcgagccatgatggctat
gtcaagttctggcagatctacattgaggggcaggatgagccaaggtgcctgcatgagtgg
aagcctcatgatgggcggcctctctcctgtctcctgttttgtgacaaccataagaaacag
gaccctgaggtcccattctggaggttcctcattactggcgctgaccagaatcgggagttg
aagatgtggtgcacagtgtcctggacctgcctgcagacgattcgcttctccccagatatc
ttcagctcagtgagtgtgccccccagcctcaaggtttgcctagacctttcagcagaatac
ctgattctcagcgatgtgcaacgaaaggtcctctatgtgatggagctgctgcagaaccag
gaagagggccgtgcctgcttcagttccatctcggagttcctcctgacccacccagtgctg
agctttgggatccaggttgtgagtcgctgccggctgcggcacactgaagtgctgcctgcc
gaggaggagaatgacagtctgggggctgatggtactcagggagctggtgccatggagtct
gcagctggtgtgctcatcaagctcttttgtgtgcatactaaggcactgcaagatgtgcag
atccgcttccagccacagctgaaccctgatgtggtagctccactccccacccacacatcc
catgaggactttgcatttggagagtctcgatctgaactaggctctgaaggcctgggatct
gcctctcctggctcccagcctgacctgcgacgcattgtagagctgcctgcacctgctgac
ttcctcagtctgagcagtgagaccaaacccaagttaatgacacctgatgccttcatgacg
cccactgcctccctacagcagatcactgcatcccctagcagcagcagcagcagcagcagc
agtagcagcagcagtagcagtagcagcagcagctctcttacagctgtgtctgctatgagc
agcacttcagctgtggagccctccttgccaaggccacccgaggagctgaccttgagcccc
aagttgcagctggacggcagtctgacagtgagtggcagcagcagccttcaggcaagccca
cgcagcctcctgcctggcctactcccaggcccagccgacaaattgactcccaaagggcct
gggcaggtacctcctgctgcctctgcactgtccttggagctgcaggaagtagaacctcta
ggactaccccaggcctcccccagccgtacccgttcccctgatgttatctcttcggcttcc
actgccctgtcccaggacatccctgagattgcgtctgaggccctgtcccgtggctttggc
tcctctgcccctgagggccttgagccagacagtatggcctcagctgcctcagcactacac
ctgctatccccacggccccgtccagggcccgagcttggcccccagcttggcctagatgga
ggccctggggacggagatcggcatagtaccccttccctcctggaggcagccttgacccag
gaggctgtgactcctgatagtcaggtctggcctacggcgcctgatattactcgtgagacc
tgtcccactctggcagagagccccaggaacggcctccaggaaaagcacaagagcctggcc
ttccaccgaccaccttatcacctgctgcagcaacatgatagccaggacactagtgctgag
caaagtgaccatgatgatgaggtggccagccttgcttctgcctcaggaggctttggcacc
aaagttccccctcctcggctgcctgtcaaggactggaaaaccaagggatctcctcgggct
tcacccaagctcaagcggaaaagcaagaaggatgatgggaattcagccgtgggatcccgg
cttacagagcaccaggtggcagagccccctgaggactggccagcattaatttggcaacag
cagagagagctggcagagctgcggcacaaccaagaagaactgctgcagcgcctgtgtacc
cagctcgaaggcctgcagagcacggtcacaggccatgtggaacgagcactagagactcgg
catgaacaggaacagcggcggctggagcgggcactggctgaggggcagcagcggggtggg
cagctgcaggagcagctgacccagcagctttcccaggcactgtcttcagctgtggctggg
cggctggagcgcagcattcgggatgaaatcaagaagacggttcctccgtgtgtctccagg
agtctggagcccgtggcaggtcaactgagtaactcagtggctaccaagctcacagctgtg
gagggcagcatgaaagagaacatctctaaactgctcaagtccaagaacttgacagatgcc
attgcccgagcagctgcagacacattacaggggccaatgcaggctgcttaccgtgaagcc
ttccagagtgtggtgctgcctgcctttgagaagagctgccaggccatgttccagcagatc
aatgatagcttccggctgggcacacaggaatacttgcagcagctagaaagtcacatgaag
agccggaaagcacgggaacaggaagctcgggaacctgtgctggctcagctgcggggcctg
gtcagcacgctgcaaagtgccactgagcagatggcggccactgtgtccagcagcgttcgg
gctgaggtgcagcaccaactgcacgtggctgtgggcagcctgcaggagtcaattttagca
caggtacaacgtatcgttaaaggtgaggtgagcgtggcactcaaggagcagcaggctgct
gtcacctccagcatcatgcaggccatgcgctcagctgctggcacacctgtcccctctgcc
catctcgactgccaggcccagcaagcccatatcctgcagctgctgcagcagggccacctc
aatcaggccttccagcaggctctgacagctgctgacctgaacctggtgctgtatgtgtgt
gaaactgtggacccagcccaggtttttgggcaaccaccctgcccactctcccagcccgtg
ctcctttccctcatccagcagctggcatcagaccttggcactcgaactgacctcaagctc
agctacctggaagaggctgtgatgcacctggaccacagtgatcccatcactcgagaccac
atgggctccgttatggcccaggtgcgccagaagctcttccagttcctgcaggttgagcca
cacaactcacttggcaaagcggcccggcgtctcagcctcatgctgcacggccttgtgacc
ccgagcctcccttag
DBGET
integrated database retrieval system
