Oryctolagus cuniculus (rabbit): 100352924
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Entry
100352924 CDS
T03373
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ocu03016
]
100352924
Enzymes [BR:
ocu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
100352924
Transfer RNA biogenesis [BR:
ocu03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
100352924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-GeneID:
100352924
NCBI-ProteinID:
XP_002714277
Ensembl:
ENSOCUG00000005777
UniProt:
A0A5F9D1E5
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All DBs
Position
12:139228620..139957439
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AA seq
571 aa
AA seq
DB search
MPSASCDALLDDIEDIVSQEDSKPKDRHFARKHVVPKVRRRNAQQYLEEESSPPSDSTIP
GIQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITENASDADLWLLNSCTVKNPAEDHFRN
SIKKAQEENKKVVLAGCVPQAQPRQDYLKGLSVIGVQQIDRVVEVVEETIKGHSVRLLGQ
KKENGRRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGNLASYPIDELVDR
AKQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVDVIPEGAMLRLGMTNPPYILEH
LQEMAKILNHPRVYAFLHIPVQSASDSVLMAMKREYCVADFKSVVDFLKEKVPGITIATD
IICGFPGETDQDFQETVKLVEEYKFPSLFINQFYPRPGTPAAKMEQVPAHMKKQRTKDLS
QVFHSYNPYDHKIGERQQVLVTEESFDSKFYVAHNRFYEQVLVPKNPAFMGKMVEVDIYE
SGKHFMKGQPVSDAKVYTPSISKPLAKGEVSGLTEELRNKLGHHLSSTSRGSSSSRTMRP
TPSLHQDCALRVAVGLALLAFLAAFLVRVCN
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgccatctgcatcctgtgatgctctgctggatgacatagaagacattgtgtcacaggag
gattcaaagccaaaagacaggcattttgcaagaaagcacgttgttccaaaggtacgaagg
cgaaatgcccaacaatacttggaagaggaaagtagtccaccaagtgatagcactattcca
ggcatacagaaaatttggatacggacttggggatgttctcacaataattcagatggggaa
tatatggctggacagctagctgcttatggctataaaattacagaaaatgcttcggatgca
gatttatggctcctgaacagttgtactgtaaaaaacccagctgaagaccattttagaaat
tcaattaagaaggctcaggaggagaacaagaaggtggtgctggctggctgcgttcctcaa
gcccagccccgccaggactacctgaaaggactgagcgtcatcggggttcaacagatagat
cgcgtggtggaagttgtggaggaaaccatcaaaggtcactctgtgcgactgctgggtcag
aaaaaggaaaatggaaggcggctggggggagcacgactggatttgccgaagattaggaag
aatccactgatagaaatcatttccatcaatactgggtgtctcaacgcttgtacctactgc
aaaactaaacatgccagaggaaatttggccagttatccgattgatgaacttgtagataga
gccaaacagtcttttcaagagggcgtctgtgagatatggctgaccagcgaggacacaggg
gcctacggcagagatattggcactgatctccccacgctgctgtggaagcttgttgacgtg
attcctgagggagcaatgctgaggcttggcatgacaaacccgccctatatcttagagcat
ctgcaggagatggcaaaaatcctcaatcaccccagagtctatgctttcctgcacatcccg
gtccagtcggcctccgacagcgtgctcatggccatgaagagagaatactgcgtggccgat
ttcaaaagcgtagtggattttctgaaagagaaagttcctggaataactattgccacagat
attatctgtggttttcctggagaaacagatcaggattttcaagaaacagtgaaacttgtt
gaagagtacaaatttccaagcctctttattaaccagttttacccaagaccaggaacccct
gctgcaaaaatggaacaggttccagcacacatgaaaaagcaaagaacaaaagatctttct
caggtatttcattcctacaatccgtatgatcacaagatcggcgagagacaacaagtgtta
gtaacagaagaatcgtttgattccaagttttatgttgcacacaatcgattctatgagcag
gttttagtgccaaagaatcccgcattcatggggaaaatggttgaagtggacatttatgaa
tcggggaaacattttatgaaaggacaaccagtgtcagacgccaaagtgtacactccgtcc
atcagcaaaccgttagcaaagggggaagtctcgggcttgacagaggaactcagaaacaag
cttgggcaccacctgagttcaacatcccgcggctcgtcgagttccaggacaatgcggcca
acgccaagcctgcatcaggactgcgccctgagggttgctgtgggtctcgctctgctggca
tttcttgctgcttttttagtcagagtctgtaattag
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