Oryctolagus cuniculus (rabbit): 100353012
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Entry
100353012 CDS
T03373
Name
(RefSeq) phospholipid-transporting ATPase ABCA3 isoform X2
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100353012
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocu02000
]
100353012
Transporters [BR:
ocu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
100353012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
SMC_N
AAA_15
RsgA_GTPase
AAA_29
AAA_23
Motif
Other DBs
NCBI-GeneID:
100353012
NCBI-ProteinID:
XP_017197999
Ensembl:
ENSOCUG00000027125
LinkDB
All DBs
Position
6:12360083..12483899
Genome browser
AA seq
1678 aa
AA seq
DB search
MAWLEFRAFRSLLWKNFILKKRRIINLLTEIFLTIVFGVGILLARKFVVVKKNGPFNYSA
QQVDNVPTFIGAPATTPYPWELAYVPSKSTAVQNIVENVKDNLNSNMKVLGFSSEREFED
YVKQNNKTKNVLAGIVFDHDFQNSNDPLPLKVKYHLRFSSFKKNSRKFATQLEEESWLTN
SLFPSMPSMGPRNQHDALGGNPGYISEGFLAVQHALDKAIMRHHNNTATETLFNGVKIFV
QRFPYPSYYHDVFFLFAIVFIPLIIVCIFSMNHLTIIQSIVWEKENRLKEYQLMIGLSNW
MLWTAYFFTFILLYFIIIIIICIILYIKIQSVSVLEYSDPIIVFIFLLFYTMPSICFSFM
VSTFFSNAYFAITLGGFCFFITYLPAANLSVNYGQMTFNQKIVSCLSSNYAMALGFKFIF
DAEVKKTGIKWNNIFSPNKQDNFLFAYILGMLLLDALLYFIVTWYVEAVYPGKYGVPKPW
NFFLQPSYWFGEPPVKKSETHQFQETIQSKYFEAEPTDLVTGITIKHLHKVFQDKGTTKV
AIKELSLNLYEGQITVLLGHNGAGKSTTMSILSGLYPPTSGEAYVYGYDISTQMVQIRKS
LGLCPQQDLLFNYLTVSEHLQFYSAIKGIPQKKCLKEIDHMLSAFNLLEKRDAFSKSLSG
GMKRKLSIIIALLGDSKVVILDEPTSGMDPASRRATWDLLQNYKQNRTMLLTTHYMDEAD
VLGDRIAIMVQGYLQCCGSSIFLKKLYGVGYHIVMVKEPHCNVEEVTKLIHYYAPAATME
SNVGTELSFTLPKEYAHRFETLFTALEKRQEKLGIASFGASITTMEEVFLRVSHMENVPE
DILAMQPPSQMSQPTMNQNRNASDVQGVHSPTLNESSIRFNTGCSLYCQQFRAMFLKRIM
FSWRNWKLVLVQVLGLAASFAFLFEVANPSNAEEKARKMDLGEYGQTIVPYSISGNSDLT
TNFLKLLESKLISEKQKLKEVKGDLLNFLMENSDNRLYIIALSIEVKTNETVFTVLFNNE
AYHSPSVALAVLDNVLSMSVSGKDASLTVSNKPQPRPNSKDKERTENGNMVASNIQLGVA
ILISGFCLLTVTEKTSKAKHIQFLSGTSVFVYWISALLCDFIIFFISFLLLMIVFRYYKL
NIYIMEYHILETMLIFTLFGWSAIPLTYLLSFLFSGSTSAYVKLILFNYFSGTICILIDN
SVDIMRSLSNGTKQFLRNLLLLFPNYNLAKCLSEYTNIYSLKILCNALKTPSAYLNCSKE
NTKKTIYSLEKGMLGKYFIIMGIAGFLFLLFILLWESTFWRVRTFLNQQVFFRIYKKFKK
EQVSKKLSGKSEDEDVQNERINILQHPEKFQNSVVLIKELTKIYFKYPVILAVKNISLAI
QKKECFGLLGFNGAGKTSTFQILTGEESATSGDVFIDGFSINRNVLQVRSRIGYCPQFDA
LLEYMTAREILIMYARVWGVSESQIQLYVNSYLNSMELEPHANKIISTYSGGNKRRLSTA
IALMGRSSVVFLDEPSTGMDPVARRLLWNVVTKTRDSGKAIVITSHSMEECDALCTRLAI
MVKGKFMCLGSPQHLKNKFGNIYILKVKGKSEHMLEPFKNFIKMTFQGSDLKHQNQKILN
YYIPCKDNGWGKMFGILEKAKEQFDLEDYSISQITLEQVFLTFANPENTDDDSLQKVP
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atggcctggttggagtttagagcatttaggagtcttctctggaagaattttattttaaag
aagcggcgaattattaatttacttacagaaatattcttaacgattgtatttggtgttgga
attttgttagcacgcaaatttgttgttgtaaagaagaatggacctttcaattatagtgct
cagcaagttgacaatgtgcctacattcatcggtgctcctgctactactccttatccttgg
gaattggcttatgtaccttccaaaagtactgcagtacagaatattgttgaaaatgtgaaa
gacaatttaaactccaacatgaaagttttgggattttcttcggaaagagaatttgaagat
tatgttaaacaaaataataaaactaaaaacgttttggctggtattgtttttgaccatgac
ttccagaatagcaatgatcccctgccacttaaggtgaaataccacctgcgttttagtagt
tttaagaagaacagcagaaagtttgcgactcagttggaagaggaatcctggttaacaaat
tctctctttccgtccatgccttctatgggacccagaaaccaacatgatgcacttgggggg
aatccagggtacatcagtgaagggttcctggctgtgcagcatgccctggataaggccatc
atgcggcatcataacaacacagctacagaaacactgtttaatggagtcaagatttttgtt
cagagatttccatatccatcttattatcatgatgttttctttttatttgctattgttttc
atccctttaataattgtatgtatcttctctatgaatcatcttaccataattcaatctatt
gtgtgggaaaaagaaaatcgattgaaggaataccagctcatgataggactcagtaattgg
atgctctggactgcctatttcttcacattcatcctcttgtattttattatcatcatcatt
atatgcataattttatatatcaagattcaatctgtctcagtccttgaatacagtgaccca
attattgtcttcatctttttgctattttataccatgccctcaatatgcttcagctttatg
gttagcacattcttcagtaatgcctattttgctattactctgggaggtttctgttttttt
atcacctatcttccggctgctaacctgtctgtcaactatggacagatgacattcaaccag
aagatagtttcttgtctcagctctaattatgcaatggcactgggatttaaatttatattt
gatgcagaagtgaagaaaactggaattaaatggaataacatcttctcaccaaacaaacaa
gacaactttttatttgcctatatcctggggatgttactacttgatgctttattgtatttc
attgtgacttggtatgtagaagctgtatatccaggaaagtatggtgtgcccaagccatgg
aactttttcttgcagccctcttactggtttggagaaccacctgtgaaaaaatctgaaaca
caccagtttcaagaaacaattcaaagcaagtattttgaagctgaacctactgatttggta
acaggtatcacgatcaaacacttgcacaaggttttccaagataagggcactactaaagta
gcaataaaggaattgtctctgaatttatatgagggacagatcactgttcttctcggacac
aatggggcaggaaaatccactaccatgtccattctgtcaggtctctatccgcctactagt
ggagaggcctatgtttatgggtatgatatctcaacccagatggttcagatcagaaaatca
ctggggttgtgtccccagcaggatttgttgtttaattacttgacagtatcagaacacctt
caattctatagtgcgataaaaggaatacctcaaaagaagtgtcttaaggaaattgaccac
atgctgtctgcttttaacctgctagaaaaacgtgatgcattttcaaagtcactgagtgga
ggaatgaagcgcaaactctccatcattatagcacttttaggagactccaaggtggtgata
cttgatgagcccacatctggcatggacccagcctcaaggagggccacctgggacctcctt
cagaactataaacagaatcgtaccatgttactgaccacccactacatggatgaagctgat
gttctaggtgaccgcattgccatcatggtccaaggatacttgcagtgctgtggctcttca
attttcctgaaaaaattatatggtgtaggataccacatagtcatggtgaaggaacctcac
tgtaatgttgaagaagtcacaaaattgattcattactatgcaccagcagccacaatggag
agcaatgttggaactgaattgtcatttactctacccaaagaatatgcacacaggtttgaa
actctgtttactgccctggaaaagagacaggaaaagctgggtattgctagctttggtgct
tcaatcactactatggaagaagtcttcctcagggtcagtcacatggaaaatgtaccagaa
gatatcctagccatgcagcctccctcgcagatgagccaacccacaatgaaccagaatagg
aatgcatcagatgtccagggggtacattctcccacactgaatgaaagctctattaggttt
aatactgggtgctccctctactgccaacagtttcgtgccatgttcttaaagagaataatg
ttcagttggcgcaattggaaactggttttggtacaggtactgggacttgcagcttccttt
gcctttctgtttgaggttgctaacccttcaaatgctgaagagaaggctagaaaaatggat
ttgggtgaatatggtcagaccattgtgccttattctatttctggaaattctgatttgact
acaaattttttaaaactccttgagagtaagctaatatctgagaaacaaaaacttaaagaa
gtgaaaggtgatctactgaatttcttaatggaaaatagtgataatcgtttatatattatc
gcgctttccattgaggtgaaaacaaatgagacagtatttactgttctgttcaacaatgaa
gcttatcattcaccatctgtggccctagcagtgttagacaacgttctgtccatgtcagtt
tctggcaaggatgcttccttaacagtgtccaacaaacctcagccacgccctaacagtaaa
gataaggaaagaactgaaaatggaaatatggtggcctccaatatacagcttggtgtggct
attctgatcagtggattttgtctcctgacagtgactgagaaaacttctaaggcaaagcat
atccagtttttgagtggaacctctgtctttgtgtactggatttctgctttactgtgtgat
ttcatcatcttcttcatttctttcttattactaatgattgtattcagatactacaaactt
aatatttacatcatggagtatcacattctggaaacaatgctaatcttcacactatttggc
tggtctgccattcccctcacgtatctgttgagcttcctgttttctggaagtacttctgcc
tatgtcaaactgatcctattcaactacttttcaggcactatttgcatcctcatagacaac
tcggtagatatcatgcgaagtttatcgaatggcaccaaacagtttctacgcaatttgtta
ctgttgtttcccaattacaaccttgcaaagtgcctcagtgaatatactaatatctacagt
ttgaagatactgtgcaacgctctaaagactccctctgcctaccttaattgtagtaaagaa
aatactaagaagactatttactctttggaaaagggtatgcttggaaagtattttattatc
atgggtattgcaggctttcttttccttctcttcattttactttgggagagtactttttgg
agagtaagaacatttctcaatcaacaagttttctttagaatctataagaaattcaagaag
gagcaggtgtccaagaaactttctggaaaatccgaagatgaagatgtacaaaatgagaga
attaacatactgcagcatcctgagaagtttcagaattctgtagttcttattaaggaactc
acaaagatatattttaagtatccagttattctggctgtgaaaaatatctcccttgcaata
caaaagaaagaatgctttggattgcttggattcaatggagctggaaaaacaagtaccttc
caaattttgactggagaagagagtgctacctcaggggatgtgttcattgatggctttagc
atcaacagaaatgtcctacaggtgaggtcgagaattggctattgtcctcaatttgatgcc
ttgctggaatacatgactgctcgagaaatactgataatgtatgccagagtttggggagtc
tctgagtctcagattcagctgtatgtgaactcatatttgaactcaatggaactggagcct
catgctaacaagattattagcacctatagtggaggaaacaaacgtaggctgagtactgct
attgctctaatgggaaggtcctcagttgtcttcctggatgagccatcaacaggcatggac
ccagtggcccgacgcctgctctggaatgtggtgaccaagacccgtgacagtggaaaagct
attgttatcacctcccacagtatggaagaatgtgatgccctctgtaccaggctagccatc
atggtgaaggggaagttcatgtgcttgggcagccctcagcatctcaagaacaagtttggc
aatatttacatcctgaaggttaagggcaagagtgagcatatgttggaaccttttaaaaat
tttatcaaaatgacatttcaaggtagtgacttgaagcaccagaatcaaaagatccttaac
tactatattccctgcaaggacaacggctggggaaagatgtttggcattttggagaaagct
aaagagcaattcgatttagaagattattccatcagtcagataaccctggaacaagtcttc
ctcacttttgctaatccagaaaatacagatgatgattctctacaaaaggtgccatga
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integrated database retrieval system
