Oryctolagus cuniculus (rabbit): 100353070
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Entry
100353070 CDS
T03373
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X3
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocu03021
]
100353070
Transcription machinery [BR:
ocu03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
100353070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Zn_ribbon_RRN7
Rrn7_cyclin_N
Zn_ribbon_NOB1
Motif
Other DBs
NCBI-GeneID:
100353070
NCBI-ProteinID:
XP_008248215
Ensembl:
ENSOCUG00000005643
LinkDB
All DBs
Position
Unknown
AA seq
588 aa
AA seq
DB search
MDLEEAREFQERCTQCAAVSWGLTDEGKYYCTSCHNVTERSKEVIHTESIPNTKIKAISR
GLKRKSKLEKGWDWYVCEGFQYILCQQAEALKTLGVGPELKNEVLHNFWKRYLQKSKQAY
CKNPVYTSGRKVTQVLEDHLSHSDWTSDPELSDAHCLSLVESWAESQSDVQSRKPSSSTR
ASHSETASICSGSLDGVEYSQRKEKGIVKMTVPRTLAFLYLSLLWQREAVTLSDLLRFVE
EDHIPYVNAFERFPEEMKLYGRDKGIFAVESWPDYEDIYKKMIEIAIFLDLPRFPDITED
CYLHPNILVMKYLMEVNLPDEMQGLTCQVVKMTGIGEVDFLTFDPIAKMAKTVKYDVQAV
AVIVVALKLLFLLDDNVEWSLSDLAEDYNEDHQDKPWFDFRKWYQVMKKTVDEKKQKREE
ARAKYLWKSEKPLYHSYIDKPVVYKRREMVVNLQKQFSALADCTPAPGEKKPSSFQFNWT
EKGTDRPCFHGHSLRGVLSKKGQSLVIKNSLYWLSTQKFCRSYCKHVTTYEESNFSLSYQ
FVLNLFSFLLRIKASLLHEEVSLIEKKLFKRKYMSSNESSRSRRVRRR
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggacctggaggaggcgagagagtttcaggagcgctgtactcaatgtgctgctgtctcg
tggggtcttactgatgagggcaaatattactgcacatcttgccacaatgttacagaaaga
tccaaggaggtaatacacaccgagtccatccccaacaccaagatcaaagccatcagccgc
gggctcaaaagaaaaagcaagctggaaaaaggctgggattggtacgtgtgtgaaggcttt
cagtatatactctgtcagcaagcagaagctctgaagacccttggagtaggcccggagcta
aagaatgaagttttacataatttttggaagcgctatcttcagaagagcaagcaggcatat
tgtaaaaacccggtctacaccagtggaaggaaagttacacaggtgttagaagaccacctg
agtcattcagactggaccagtgatcctgagctaagtgatgctcactgtctgtccttggtt
gaaagctgggcggagtctcagtctgacgtccagagtcggaagccttcctccagtaccaga
gcatcgcactcagaaaccgcgtcgatctgctcgggctctcttgatggggtcgagtactcg
cagcggaaggagaagggcattgtgaagatgactgtgcccaggacgcttgctttcctctat
ctgtccttactttggcagagagaggccgtcactctttcagaccttctgagatttgttgaa
gaggaccatattccatatgtaaatgcttttgagcgttttccagaagaaatgaaactgtat
gggcgtgacaaaggcatctttgctgtggagtcgtggcctgactatgaagatatctacaaa
aagatgattgaaattgccatattcttagatttgcctcgttttccagacataactgaagac
tgctacctccaccccaacatcttggtcatgaagtacctgatggaagtcaacctccctgat
gaaatgcagggtttaacctgccaagtagtgaaaatgactggaataggagaggtggatttc
ctgacgtttgatcctatcgctaaaatggcaaagactgttaaatatgatgtacaagctgtg
gctgtcattgtagtggcactgaaactgctctttttattggatgacaatgtggaatggtct
ttgtctgatcttgctgaagactataatgaagaccaccaagataagccatggtttgatttc
agaaagtggtaccaagttatgaagaaaaccgttgatgagaaaaaacaaaaacgggaggaa
gccagggcaaagtacctgtggaaaagtgaaaagccactctaccactcgtacattgacaag
ccggtggtgtataagagacgagagatggtggtgaatctccaaaagcaattcagtgcactg
gctgattgcaccccagctcctggggagaaaaagccttcaagctttcagttcaactggact
gagaagggcaccgacaggccgtgtttccacggacatagcctgaggggcgtcctgagtaag
aaaggccaatccctggtcatcaagaactcgctatactggctcagcacccaaaaattctgc
agaagctactgtaaacatgtgacaacctacgaagaatctaatttttctctgagttaccag
tttgtattaaatctcttctccttcctgctgagaataaaggcctccttactccatgaagaa
gtgagcttaattgaaaagaaactttttaaaagaaaatacatgagttcaaacgagtcttca
agatccagaagagtgagaagacgttga
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