Oryctolagus cuniculus (rabbit): 100353160
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Entry
100353160 CDS
T03373
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03250
Viral life cycle - HIV-1
ocu04623
Cytosolic DNA-sensing pathway
ocu05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100353160
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
100353160
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
100353160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocu03400
]
100353160
DNA repair and recombination proteins [BR:
ocu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
100353160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
SAM_1
HD
HD_assoc_2
PDEase_I
Motif
Other DBs
NCBI-GeneID:
100353160
NCBI-ProteinID:
XP_051702077
Ensembl:
ENSOCUG00000007607
LinkDB
All DBs
Position
4:10787970..10833020
Genome browser
AA seq
660 aa
AA seq
DB search
MLRRLAAEVGLLVRLRGAREPRFLSVLRRAPGVAMQRAECEQPSKRPRCDGSPRTPPNTP
SAADWSLSPELHPDHQTWGPEQVCAFLERNGFSELRLLKSFRENKITGSLLPFLDESLLE
NLGISSLGDRKKLLNCIQQLSQTYVDTMKIINDPIHGHIELHPLLIRIIDTPQFQRLRYI
KQLGGGYYVFPGASHNRFEHSLGVGYLAGCLVRALSEKQPELQISERDVLCVQIAGLCHD
LGHGPFSHMFDGRFIPLARPEVKWTHEQGSVEMFEHLVSANGLRAVMEHYGLVPEEDIYF
IKEQIKGPLESPEDEATWPYKGRPREKSFLYEIVANKRNGIDVDKWDYFARDCHHLGIQN
NFDHKRFIKFARVLEVENKKRICTRDKEVGNLYDMFHTRYSLHRRAYQHKVGNIIDTMIT
DALLKADPYIKITGAAGKTYSISTAIEDMEAFTKLTDNIYLEILYSTDPKLAAAQEVLKN
IEYRKLYKYVGETQPGSPKKKIKKEDYEQLPKEVADAKPSDVPLEAEMKAEDFIVDVINI
DYGMQDKNPIDHVRFYCKAEPNKPVMITKGQVSQFLPEIFAEQLIRVYCKKTDKQSLFAA
RQHFVHWCAIRDFTKPQDGDVIAPLITPRKREWNRDPGASPTGSREALRSRGQLFQDKLA
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgccgtctcgccgctgaggttgggttgttagtgcgtctgcgcggggctcgggag
ccgcggttcttgagtgtgcttcggcgggcgccgggtgtagccatgcagagagcggagtgt
gagcagccctctaagcggccccgatgcgatggcagcccgagaaccccgccgaacactccg
tccgcggcagactggtccctgagcccggagctccacccggaccaccagacctggggcccg
gagcaggtgtgcgccttcttagagcgcaatggcttcagcgagctccgactgctgaaaagc
ttccgagaaaacaaaatcacagggtcattactgccctttcttgatgaatctcttcttgag
aatcttgggataagttccttgggagataggaagaagctgcttaattgcatccaacaattg
agtcaaacttacgtcgatacaatgaagataattaacgatcccatccacggccacatcgag
ctgcaccccctcctcatccgcatcatcgacacgccccagttccagcggctgcggtacatt
aaacagctgggcggaggttactatgttttcccaggagcctcacataaccggtttgagcat
agtctaggggtgggatatctagcgggatgtctagttcgtgcactaagtgaaaaacagcca
gagctgcagatcagtgagcgagatgtgctctgtgttcagattgctgggctttgccatgat
cttggtcatgggccattttctcatatgtttgatggaagatttattcccctcgctcgtcca
gaggtgaagtggacgcacgagcagggctccgtggagatgttcgagcacctggtgagcgct
aacgggctcagagctgtcatggagcactacggtctcgtccctgaagaagatatttacttc
atcaaggagcaaatcaaggggccgctcgagtcacccgaggacgaggccacgtggccctat
aaagggcgccctagagagaaaagcttcctgtatgagatcgtggccaacaagagaaacggc
atcgatgttgacaaatgggattattttgccagggactgccatcacctgggaatccagaac
aactttgatcacaagcgcttcatcaagtttgcccgcgtcttagaagtagaaaataagaaa
cggatttgtaccagagacaaggaggttgggaatctctatgacatgttccacacacgctac
tccttacaccgcagagcctaccagcacaaggttggcaacatcatcgacacaatgattaca
gatgctctcctcaaggcggacccctacataaagatcacaggtgcagccggaaagacgtac
agcatttccacggccatcgaggacatggaagccttcaccaagctcacagataatatttat
ctggagatcttatactccacggatcccaaattggctgcagcacaagaggttctaaaaaat
attgaataccgcaagctctacaagtacgtgggcgagacccagccggggagcccgaagaag
aagattaagaaggaagactacgaacagcttcccaaggaggtcgccgacgccaagcctagc
gacgtgccgctggaggctgagatgaaggcggaagatttcatcgtggacgtcatcaacata
gattatgggatgcaagacaagaatccgattgatcacgttcgcttctactgtaaggctgag
cccaacaaacccgtcatgatcaccaaaggccaggtttcgcagtttctgccagaaatattc
gctgagcagctgatccgcgtgtactgtaagaagacggacaaacagagcttgttcgccgca
agacagcacttcgtccactggtgcgccatccgcgacttcaccaagccgcaggatggcgat
gtaatcgcgccgcttatcacccctcgaaagcgggagtggaacagggatccaggcgcgagc
cccaccggcagccgggaggcgctcaggtccaggggccagctcttccaggacaagctggcg
tga
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