Oryctolagus cuniculus (rabbit): 100353191
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Entry
100353191 CDS
T03373
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03015
mRNA surveillance pathway
ocu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100353191
09123 Folding, sorting and degradation
03018 RNA degradation
100353191
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100353191
03041 Spliceosome [BR:
ocu03041
]
100353191
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100353191
mRNA cycle factors
Stress granule specific factors
100353191
Spliceosome [BR:
ocu03041
]
Complex C
Other components
Complex C specific factors
100353191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
RRM_occluded
RRM_MARF1
RBD_DEAH11
RRM_3
RBD_RDR6
Motif
Other DBs
NCBI-GeneID:
100353191
NCBI-ProteinID:
XP_051676021
Ensembl:
ENSOCUG00000028226
UniProt:
A0A5F9C3X8
LinkDB
All DBs
Position
15:27639168..27646988
Genome browser
AA seq
370 aa
AA seq
DB search
MNVAAKYRMASLYVGDLHSDVTEDLLFKKFSRVGPVLSIRICRDLVTRRSLGYAYVNFLQ
LADAQKALDTMNFDVVKGKAIRLMWSQRDAYLRKSGIGNVFIKNLDKSIDNKSLYECFSA
FGKILSSKVMSDDRGSKGYAFVHFQSQSAADRAIEEMNGKFLKDCKVFVGRFKSRKDREA
ELRNKASEFTNVYIKNFGDDMDDERLREVFSTYGRILSVKVMTNSCGKSRGFGFVSFDSH
EAARKAVEEMNGKEVNGQPIFVGRAQKKVERQAELKQMFEQLKKERIRGCQGAKLYIKNL
DENIDDEKLRKEFSSFGSISRVKVMQEEGQSKGFGLICFSSSEDAARAMTVMNGRILGSK
PLNIALAQGY
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtggcagccaagtaccgcatggcctccctctatgtgggcgacctccattccgat
gtcaccgaggacctgctgttcaagaagttcagcagggtggggcccgtgttgtccatccgc
atctgcagggacctggtgacccgccgctctctgggctatgcctacgtcaacttcctgcag
ctggccgatgcccagaaggccctggacacaatgaactttgatgtggtgaaaggcaaggcc
atccgactcatgtggtcccaacgggacgcctacttgaggaaatctggaatcgggaacgtc
ttcatcaagaatctggacaagtccatagacaacaaaagcctttatgaatgtttttcagct
tttggaaagatcctttcttccaaggtgatgagtgatgaccggggctccaagggttatgcg
ttcgtgcacttccagagccagagcgccgcagacagggccatcgaggagatgaacgggaag
ttcctcaaggactgcaaggtgtttgtgggcagattcaaaagccgcaaagatcgggaagcc
gagctcagaaacaaagccagtgaattcaccaatgtctacatcaaaaacttcggggacgac
atggatgatgagaggctgcgggaagtcttcagtacctacggcagaattctcagtgttaag
gtgatgaccaactcctgtgggaaatccagaggctttggctttgtgagttttgacagccac
gaggccgccagaaaggccgtggaagaaatgaacggcaaggaagtaaacgggcagcccatt
tttgtaggtcgggcacagaagaaggtagagcggcaggctgagttaaagcaaatgtttgaa
cagttgaaaaaggaaagaatccgcgggtgccagggggcgaaactctacattaagaacctt
gatgagaacattgatgatgaaaaactccgaaaggagttttcttcctttgggtccattagc
agagttaaggtgatgcaggaagaaggacaaagcaaaggtttcggcttgatctgcttctcc
tcttctgaggatgccgctagagcaatgactgtgatgaatggtcgcatcttgggctccaaa
cctctcaacatcgctttggcccaggggtactag
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