Oryctolagus cuniculus (rabbit): 100353248
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Entry
100353248 CDS
T03373
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocu03041
]
100353248
03016 Transfer RNA biogenesis [BR:
ocu03016
]
100353248
Enzymes [BR:
ocu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100353248
Spliceosome [BR:
ocu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100353248
Transfer RNA biogenesis [BR:
ocu03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
100353248
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
Paramyxo_PNT
Motif
Other DBs
NCBI-GeneID:
100353248
NCBI-ProteinID:
XP_002710081
Ensembl:
ENSOCUG00000007010
UniProt:
G1SS73
LinkDB
All DBs
Position
2:164840385..164877889
Genome browser
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD
NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEVPAHMKNQALFPACVLKNAELKF
NFGEEEFKFPPKDGFVALCKAPDAYTVKSQHTGNAQVAQTKFLPNAPKALIVEPSRELAE
QTLNNVKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLSQGYSDFINRMHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKNHIRTDEVHAKDNTRPGAN
SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQF
SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS
EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGNYKGHVDVLAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttctccgagatgggtgttatgcctgagattgcacaagctgtggaggagatg
gattggctcctcccaactgatatccaggctgaatctatcccgttgatcctaggaggaggt
gatgtacttatggctgcagaaacaggaagtggaaaaactggtgctttcagtattccagtt
atccagatagtttatgaaactttgaaagaccagcaggaaggcaaaaaaggaaaaacaaca
atcaaaaccggtgcttcagtgctcaacaaatggcaaatgaacccatatgatagaggatct
gcttttgcaattgggtcagatggtctttgctgtcaaagccgagaagtaaaggaatggcat
gggtgtagagctactaaaggattgatgaaagggaaacattactatgaagtatcctgtcat
gaccaaggcttatgcagagttggttggtctaccatgcaggcctccttagacctaggtaca
gacaagtttggatttggctttggaggaacaggaaagaaatcccataataaacagtttgat
aattatggagaggagttcactatgcatgataccattggatgttacctagatatagataaa
gggcatgtcaagttctccaaaaatggaaaagatcttggtctggcatttgaagtaccagca
catatgaaaaaccaagccctctttcctgcctgtgttttgaagaatgctgaactaaaattt
aacttcggtgaagaagaatttaagtttccaccaaaagatggttttgttgctctttgcaag
gcaccagatgcttacactgtcaaatcacagcacacaggtaatgcacaggtggcacaaaca
aagtttctccccaatgctcctaaagctctcatcgttgaaccctcccgggagttagctgaa
caaactttgaataatgtgaagcagtttaagaaatatattgataatcctaaattaagggaa
cttctgataattggaggtgttgcagcacgagatcaactctccgttttggaaaatggcgta
gatatagtcgtaggcactccaggaagactagatgatttggtgtcaactggaaagctgaac
ttatctcaagttagattcctggtcctggatgaagctgatgggcttctttctcaaggttat
tctgattttataaataggatgcatagtcagattcctcagatcacctctgatggaaaaaga
cttcaggtgatcgtttgctctgctactttacattcttttgatgtgaagaaactgtctgag
aagataatgcattttcccacatgggttgatttgaaaggagaagactctgttccagatact
gtgcaccatgttgttgtcccagtgaatcccaaaactgacagactctgggaacggcttggc
aaaaaccacattagaactgatgaggtacatgcaaaagataacacaagacctggtgctaac
agtcccgagatgtggtctgaagctattaaaatcctgaaaggggaatatgctgtccgagca
atcaaggagcacaagatggatcaagcaattatcttctgtagaaccaaaattgactgtgac
aacttggagcagtattttatgcagcaaggaggaggacctgataaaaaagggcaccaattc
tcctgtgtgtgtcttcatggtgacagaaagcctcatgagagaaaacaaaacttggagaga
tttaagaagggggatgtaagatttttaatttgcacagatgtagctgctagaggaattgat
atccacggtgtaccttatgttataaatgtcaccctgcccgatgaaaagcagaactatgtt
cacagaattggcagagtaggaagagctgaaaggatggggctggccatttccctggtggca
acagaaaaagaaaaggtttggtaccatgtgtgtagcagccgtggaaaagggtgttacaac
acaaggctcaaggaagatggtggctgcaccatatggtacaatgagatgcagttgctgtca
gagatagaagaacacctgaactgtaccatttctcaggttgagccagatataaaagtacca
gttgatgaatttgatgggaaagttacctatggtcaaaaaagggctgccggtggtgggaac
tataaaggccatgtggatgttctggcacctaccgttcaagagttggctgcccttgaaaag
gaggcgcagacatctttcctgcatcttggctaccttcctaaccagctgttcagaaccttc
tga
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