Oryctolagus cuniculus (rabbit): 100353357
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Entry
100353357 CDS
T03373
Name
(RefSeq) transcription factor SOX-4
KO
K23581
transcription factor SOX4 (SOX group C)
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
100353357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocu03000
]
100353357
Transcription factors [BR:
ocu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100353357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
100353357
NCBI-ProteinID:
XP_051710957
LinkDB
All DBs
Position
12:140355418..140360263
Genome browser
AA seq
488 aa
AA seq
DB search
MVQQTNNAENTEALLAGESSDSGAGLELAIASSPTPGSTASTGGKADDPSWCKTPSGHIK
RPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKHM
ADYPDYKYRPRKKVKSGNANASSSAAAAAAASKPGEKGDKVGGSGGGGGGSGGGGGGSGN
AGGGGGGASGGGGANSKPAQKKSCGSKVAGGTGGGASKPHAKLVLAGGGGGSGGGGKAAA
AAAAAASFAAEQAGAAALLPLGAAAAADHHHHHALYKARTPGASASASAAAAASATLAAP
AKPLAEKKVKRVYLFGGLGATASPVGGVGAGADPSDPLGLYEEGGPGCSPDAPSLSGRSS
AASSPAAGRSPADHRGYASLRAASPAPSSAPSHASSSSSSSASSSSGSSSSDDEFEDDLL
DLHPSSNFESMSLGSFSSSSALDRDLDFNFEPGSGSHFEFPDYCTPEVSEMISGDWLESS
ISNLVFTY
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcaaaccaacaacgccgagaacacggaagcgctgctggccggcgagagctcg
gactcgggcgccggcctcgagctggccatcgcctcgtcgcccacgcccggctccaccgcc
tccacgggcggcaaggccgacgacccgagttggtgcaagacgccgagcgggcacatcaag
cggcccatgaacgccttcatggtgtggtcgcagatcgagcggcgcaagatcatggagcag
tcgcccgacatgcacaacgccgagatctccaagcggctgggcaaacgctggaagctgctc
aaagacagcgacaagatccctttcattcgggaggcggagcggctgcgcctcaagcacatg
gctgactaccccgactacaagtaccggcccaggaagaaggtgaagtccggcaacgccaac
gccagctcctcggccgccgccgccgccgccgcctccaagcccggggagaagggagacaag
gtcggtggcagcggcgggggcggcggcggcagcggcggcggcggcggcggcagcggcaac
gcggggggaggaggcggcggcgcgagcggcggcggcggcgccaactccaaaccggcgcag
aagaagagctgcggctccaaagtggccggcggcacgggcggcggggccagcaagccgcac
gccaagctcgtcctggcgggcggcggcggcggcagcggcggtggcgggaaagctgcggcc
gccgccgccgccgccgcctccttcgcggccgagcaggcgggggccgctgccctgctgccc
ctgggcgccgccgccgccgctgaccaccaccatcaccacgcgctgtacaaggcgcggact
cccggcgcctcggcctcggcctccgcggcggccgcggcctcggccaccctggcggcgccc
gccaagcccctggctgagaagaaggtgaagcgcgtctacctgttcggcggcctgggcgcc
acggcgtcccccgtgggcggcgtgggcgcgggcgcagaccccagcgacccgctgggcctg
tacgaggagggcggcccgggctgctcgcccgacgcgccgagcctgagcggccgcagcagc
gccgcgtcgtcgccggccgccggccgctcgcccgctgaccaccgcggctacgccagcctg
cgcgccgcctcgcccgccccgtccagcgcgccctcgcacgcgtcgtcgtcgtcgtcgtcg
tccgcctcctcctcctcgggctcctcgtcttccgacgacgagttcgaggacgacctgctc
gacctgcaccccagctcaaactttgagagcatgtccctgggcagcttcagctcgtcgtcg
gcgctcgaccgggacctggattttaacttcgagccgggctccggctcgcacttcgagttc
ccggactactgcacgcccgaggtgagcgagatgatctcgggagactggctcgagtccagc
atctccaacctggtcttcacctactga
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