Oryctolagus cuniculus (rabbit): 100353387
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Entry
100353387 CDS
T03373
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein M isoform X1
KO
K12887
heterogeneous nuclear ribonucleoprotein M
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100353387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocu03041
]
100353387
Spliceosome [BR:
ocu03041
]
Common components
Common spliceosomal components
hnRNP proteins
100353387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HnRNP_M_NLS
RRM_MARF1
RRM_3
RRM_occluded
Collagen_mid
RBD_DEAH11
RRM_5
Motif
Other DBs
NCBI-GeneID:
100353387
NCBI-ProteinID:
XP_051700802
LinkDB
All DBs
Position
1:35352513..35354869
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AA seq
691 aa
AA seq
DB search
MAAGVEAAAEVAATEPKMEEESGAPGVPSGNGTPGPKSEGERPTQNEKRKEKNIKRGGNR
FEPYANPTKRYRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEGKSRGCAVVEFK
MEESMKKAAEVLNKHSLSGRPLKVKEDPDGEHARRAMQKAGRLGSTVFVANLDYKVGWKK
LKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEAVQAISMFNGQLLFDRPMHVKMD
ERALPKGDFFPPERPQQLPHGLGGIGMGLGPGGQPIDANHLNKGIGMGNIGPAGMGMEGI
GFGINKMGAMEGPFGGGMENMGRFGSGMNMGRINEILSNALKRGEIIAKQGGGGGGGSVP
GIERMGPGIDRIGGAGMERMGAGLGHGMDRVGSEIERMGLVMDRMGSVERMGSGIERMGP
LGLDHMASSIERMGQTMERIGSGVERMGAGMGFGLERMAAPIDRVGQTIERMGSGVERMG
PAIERMGLSMERMVPAGMGASLERMGPVMDRMASGLERMGANNLERMGLERMGTNSLECM
GLERMGANSLERMGPAMGPALGAGIERMGLAMGGGGGASFDRAIEMERGNFGGSFAGSFG
GAGGHAPGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKF
ESPEVAERACRMMNGMKLSGREIDVRIDRNA
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaggggtcgaagcggcggccgaggtggcggcgacggaacccaaaatggaggag
gagagcggcgcgcccggcgtgccgagcggcaatgggactccgggcccgaagagtgaagga
gaacgacctactcagaatgagaagaggaaggagaaaaacataaaaagaggaggcaatcgc
tttgaaccttacgccaatccgacaaagagataccgagccttcatcacaaacatacctttt
gatgtgaaatggcagtcacttaaagacctggttaaagaaaaagttggtgaggtaacatac
gtggagctcttaatggacgctgaaggaaagtcaaggggatgtgccgttgttgaattcaag
atggaagagagcatgaaaaaagctgctgaagttctaaacaagcatagtttgagtggacgg
ccactgaaagtaaaggaagatcctgatggtgaacatgccaggagagcaatgcaaaaggct
ggaagacttggaagcacagtatttgtagcaaatctggattataaagttggctggaagaaa
ctgaaggaagtatttagtatggctggtgtggtggtccgagcagacattctggaggataaa
gatgggaaaagtcgaggaataggcactgtgacttttgagcagtccattgaagctgtgcaa
gctatatctatgtttaacggtcaactgctgtttgacagaccgatgcacgtcaaaatggat
gagagggccttaccaaagggagattttttccctcctgagcgtccacaacaactgccccat
ggacttggtggtatcggcatggggttaggaccaggagggcagcctattgatgccaatcat
ttgaataaaggcattggtatgggaaacatagggcctgcaggaatgggaatggaaggcata
ggatttggaataaataaaatgggagccatggaaggcccctttggtggtggtatggaaaac
atggggcgatttggatctgggatgaacatgggcaggataaacgaaatcctaagtaatgca
ctgaagagaggagagatcattgcaaagcagggaggaggtggaggcggaggcagtgttccg
gggattgagaggatgggccccggcatcgaccgcatcgggggtgctggcatggagcgcatg
ggcgcaggcctgggccacggcatggatcgagtgggctctgagatcgagcgcatgggcctg
gtcatggaccgcatgggctcagtggaacgcatgggctccggcatcgagcgcatgggcccg
ctgggcctcgaccacatggcctccagcatcgagcgcatgggccagaccatggagcgcatt
ggctctggtgtggagcgcatgggcgccggcatgggcttcggcctggagcgcatggctgcg
cccattgaccgtgtgggccagaccattgagcggatgggctctggcgtggagcgcatgggc
cctgccatcgagcgcatgggcctgagcatggagcgcatggtgccagcaggcatgggggcc
agcctggagcggatgggccccgtgatggatcgcatggccagcggcctggagcgcatgggc
gccaacaacctcgagcgcatgggcctggagcgcatgggcaccaacagtctcgagtgcatg
ggcctggagcgcatgggcgccaacagcctggagcgcatgggccccgccatgggcccagcc
ctgggcgctggcatcgagcgcatgggcctggccatgggtggcggtggaggtgccagtttt
gaccgtgccattgagatggaacgtggcaactttggaggaagcttcgcaggttcctttggt
ggagctggaggccatgctcctggggtggccaggaaggcctgccagatctttgtgagaaat
ctcccatttgattttacatggaagatgctaaaggacaagttcaacgaatgtggccacgtg
ctgtacgccgacatcaagatggagaacgggaagtccaaggggtgcggtgtggttaagttt
gagtcgccagaggtggcggagcgagcctgccggatgatgaatggcatgaagctgagtggc
cgagagattgatgttcgaatcgatagaaatgcttaa
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