Oryctolagus cuniculus (rabbit): 100353425
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Entry
100353425 CDS
T03373
Name
(RefSeq) LOW QUALITY PROTEIN: serine/arginine repetitive matrix protein 1-like
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03013
Nucleocytoplasmic transport
ocu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100353425
03015 mRNA surveillance pathway
100353425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100353425
03041 Spliceosome [BR:
ocu03041
]
100353425
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100353425
Spliceosome [BR:
ocu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
100353425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
100353425
NCBI-ProteinID:
XP_051708614
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All DBs
Position
9:complement(112141265..112144616)
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AA seq
851 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKSAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSRKKRERSRSPRSDILKVP
KPEPVPEPKEPSPEKNSKKEKEKTRARSRSRSKSRSQTQSRSPSHTXPRRRHRSRSRSYS
PRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRHSSASLSASTSSSSSSRSWSP
PKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSV
SPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQRRQYRRQNQ
QSSSDCGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRMQMGKRW
QSPVTNSGRRRRSPSPPTTRRRRSPSPAPPPRRRRSPTPPPRRRTPSPPPRRRSPSPRRY
SPPIQRRYTPSPPPKRRTPSPPPPPKRRASPSPPPKRGVSHSPPPKPRSSPVTKRRSPSL
SSKHRKGSSPSRSAREARSPQPNKRHSPSPRPRVPQTSSSPPPSRRAPSSSPQRRQSPSP
STRPIRRVSRTPEPKKTKKTASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSPVQSQSP
STNWSPAVPVKKAKSPTPSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKA
VAAVAVAAAAAVPPAAVAAATTTSAQEEAEAALEPKKETESEAEDNLDDLEKHLREKALR
SMRKAQVSPQS
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggaacaagtgcggaacaggataatcggttcagcaacaaa
cagaagaaactactgaagcagctgaagtctgcagaatgcctagaaaaaaaggtggacatg
agcaaagtaaatttggaagttataaagccttggataacaaaacgagtaacggaaatcctt
gggtttgaagatgatgttgtgattgagtttatattcaaccagctggaagtgaagaatcca
gactctaaaatgatgcaaatcaacctgactgggtttttgaatggaaaaaatgctagagaa
tttatgggagaactgtggcctctgctgttaagtgcacaagaaaacatcgctggaatcccc
tctgctttcctggaactgaagaaagaagaaataaaacagagacagattgagcaagaaaaa
ttggcatctatgaaaaagcaagatgaagacaaagataagagggataaggaagaaaaagaa
agcagcagaaaaaaaagggaacggtctcgaagcccgagaagtgacatcctgaaagttccc
aagcctgaacctgtaccagaacctaaagaaccttctccagaaaaaaattccaaaaaggaa
aaggagaagaccagagcacgatctcggtcacgttccaaatcaaggtcacagacgcagtct
cgctctccttctcacacttgacctagacggcgccatagatcccgatcaagatcatactct
cctagaagacggccaagcccgaggaggcgcccatcccctcggagaagaactcctccaaga
cgaatgcctcctccgccacggcacaggaggagcagatctccagtgcgaagaagacgacat
tcatcagcatccttgtctgcaagtacctcatcatcctcttcatctcgttcctggtcgccg
ccaaagaaacctcctaagaggacatccagtccccctcgaaaaactcgcaggctatctcct
tccgcgagtcctccaaggcgaaggcataggccatcccctccagcaactccaccaccaaaa
actcgccattccccgacaccccagcagtcaaaccgtacgagaaaaagccgtgtttctgtg
tctccagggagaacttcaggtaaagtgacaaagcataaaggtactgagaaaagagaatcc
ccttcaccagcaccgaaacctagaaaagtagaattatctgaatcagaagaagacaaaggt
ggcaaaatggctgcagcagattctgtgcagcagagacgccagtacagacgacagaaccag
cagtcttcatctgactgtggctcctcttcgtcctcagaagatgagcgacccaaaagatcc
cacgtgaagaatggtgaggtaggcaggcggcggagacattccccttccaggagtgcctct
ccctcaccacgaaagcgccagaaagagacttcccctcggatgcagatgggaaagcgatgg
cagtcgccagtgaccaacagtggtagacggaggagaagtccctcaccaccaaccaccaga
aggcggcgctctccttctcccgctcctcctccgcgacggcgcaggtctcctacaccaccg
ccccgacgaaggactccttctccaccgccacgccgacgctcgccttcccctcggaggtac
tcccctcccatacagaggagatacaccccttctccacctcccaagagaaggacgccttct
cctcctccccctccaaaacggagggcgtcgccatctccaccaccaaagcggggagtctcg
cattctccacctcccaaaccgagaagctcgccggtcaccaagagacgctcgccttcgttg
tcatccaagcataggaaaggctcttcgccaagccgctccgcccgggaagcccgctcgcca
cagccaaacaagcggcactcgccttcccctcggcctcgagttcctcagacctcctccagc
cctccaccctcgcggagagcaccgtcgtcctcaccccaaagaaggcagtctccatctcca
agtactaggcccattaggagagtctcccggactccggagcctaaaaagacaaaaaagact
gcctctccaagcccacagtctgtaaggagggtctcatcctcccgatctgtgtctggatct
cctgagccagcagctaaaaaacctccagcacctccgtcccctgtccagtctcagtcgccc
tctacaaactggtcaccagcggtaccggtcaaaaaggctaagagcccaacaccaagcccg
tcaccggcaaggaattcagatcaagaaggaggtggaaagaaaaagaagaaaaagaaggac
aagaaacacaaaaaggataagaagcacaagaagcacaaaaaacacaagaaggagaaggcg
gtggcagcggtggcggtggcagctgctgccgccgtcccccctgcagctgtcgctgctgcc
acgaccacctcagcacaggaggaagcagaggcagcgctggagcccaagaaggagactgaa
agtgaagctgaagataaccttgatgacctagagaagcacctgcgggagaaggctctgcgg
tccatgcggaaggctcaggtgtccccacagtcctag
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