KEGG   Oryctolagus cuniculus (rabbit): 100353489
Entry
100353489         CDS       T03373                                 
Name
(RefSeq) UV excision repair protein RAD23 homolog B
  KO
K10839  UV excision repair protein RAD23
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03420  Nucleotide excision repair
ocu04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    100353489
  09124 Replication and repair
   03420 Nucleotide excision repair
    100353489
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:ocu03051]
    100353489
   03400 DNA repair and recombination proteins [BR:ocu03400]
    100353489
Proteasome [BR:ocu03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    100353489
DNA repair and recombination proteins [BR:ocu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      100353489
SSDB
Motif
Pfam: XPC-binding UBA ubiquitin UBA_7 Rad60-SLD Rad60-SLD_2 Crinkler UBA_3 Dsc3_N UBA_2 DUF1421 UBA_9
Other DBs
NCBI-GeneID: 100353489
NCBI-ProteinID: XP_002708173
Ensembl: ENSOCUG00000007316
UniProt: G1SST9
LinkDB
Position
1:complement(19952517..20001517)
AA seq 409 aa
MQVTLKTLQQQTFKIDIDPEETVKALKEKIESEKGKDAFPVAGQKLIYAGKILNDDTALK
EYKIDEKNFVVVMVTKPKAVTTPAPATTQQSNSATTTAVSSSTATAVTQASTPAPALAPT
STPASIAPASTTSSEPAPASATKQEKPAEKPVETPVATSPTSTDSTSGDSSRSNLFEDAT
SALVTGQSYENMVTEIMSMGYEREQVIAALRASFNNPDRAVEYLLMGIPGDRESQAVVEP
PQAAGTGAPQSSAVAAGAATTTATTTTTSSGGHPLEFLRNQPQFQQMRQIIQQNPSLLPA
LLQQIGRENPQLLQQISQHQEHFIQMLNEPVQEAGSQGGGGGGSGNAGIAEAGSGHMNYI
QVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLLQQNFDED
NT seq 1230 nt   +upstreamnt  +downstreamnt
atgcaggtcaccctgaagacccttcagcagcagaccttcaagatcgacatcgaccccgag
gagacggtgaaagcactgaaagagaagattgaatcagaaaaggggaaagatgcctttcca
gtagcaggtcaaaaattaatttatgcaggcaaaattctcaatgatgacactgctctcaaa
gaatacaaaattgatgagaaaaactttgtggtggttatggtgaccaaacccaaagcagtg
acaacaccagcaccagctacaactcagcaatcaaattctgccaccactactgcagttagt
tcctccacagcaacagctgtaactcaggcctcaacacctgcccctgctttggctcccact
tccacacctgcgtccattgctccagcatcaacgacatcttctgaacctgcacctgctagt
gcaactaagcaagagaaacctgcagaaaagccggtagagacaccagtggctactagtcca
acatcaactgacagtacatcaggagattcgtctcggtcaaacctttttgaagatgcaaca
agtgcacttgtgacaggtcagtcttacgagaatatggtgactgagatcatgtcaatgggc
tatgaacgagagcaagtaattgcagccctaagagccagtttcaacaaccctgacagagct
gtggagtatcttttaatgggaattcctggagatagagaaagtcaggctgtggttgagccc
ccgcaagcagctggtaccggagctcctcagtcttcagcagtggctgcaggtgccgcaact
acaactgcgacgacgacgacaactagttctggaggacatccccttgaatttttacggaat
caacctcagtttcaacagatgagacaaattattcaacagaatccctccctgcttccagca
ttgctacaacagataggtcgagagaatcctcaattactacagcaaattagccaacaccag
gagcattttattcagatgttaaatgaaccagttcaggaagctggcagtcaaggaggagga
ggaggtggaagtggcaacgcaggaattgcagaagctggaagtggtcatatgaattacatt
caagtaacacctcaggaaaaagaagctatagaaaggttaaaggcattaggatttcctgaa
ggacttgtgatacaagcatattttgcttgtgagaagaatgagaatttggctgccaatttt
cttctacagcagaactttgatgaagattga

KEGG   Oryctolagus cuniculus (rabbit): 108178685
Entry
108178685         CDS       T03373                                 
Name
(RefSeq) UV excision repair protein RAD23 homolog B
  KO
K10839  UV excision repair protein RAD23
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03420  Nucleotide excision repair
ocu04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    108178685
  09124 Replication and repair
   03420 Nucleotide excision repair
    108178685
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:ocu03051]
    108178685
   03400 DNA repair and recombination proteins [BR:ocu03400]
    108178685
Proteasome [BR:ocu03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    108178685
DNA repair and recombination proteins [BR:ocu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      108178685
SSDB
Motif
Pfam: UBA XPC-binding UBA_7 UBA_3 UBA_9 UBA_2 GIP1_N RasGAP_C
Other DBs
NCBI-GeneID: 108178685
NCBI-ProteinID: XP_051682871
LinkDB
Position
X:complement(32770755..32781667)
AA seq 336 aa
SPTPDDAIAGPSSRAQPSEQAARALLTRPASEQMVAEIVSMGYEREQVLAALRASFNNPH
RAVEYLLMGLPGDRASAAEVEPPQAGSSGAGRSSAVEADEGAATSGSGGHPLDVLRNLPE
FEELRRIIQHFPSLLPGVLQRLCPQDPQLEDQLRQYQEYLVHMLTTEEEEDGSEGGGGGE
GVDNAETAETVREDDSYIEVTPQEQAAIERLKALGFPEGLVIQAYFACEKNEILAASLLS
SRTWRRTERDSPVAHISRRSIRYADFVSYSVLDDLALGSPYLASELDVGAGAGVTRCRGF
RDSPHLLGMTLAKDLEEWQFSGATSIQYVDDLLVAC
NT seq 1011 nt   +upstreamnt  +downstreamnt
agccccacaccagatgacgccatcgcgggaccctcctctcgggcccagccgtctgagcag
gcagcaagggcgctgctgacacgtccggcttccgagcaaatggtcgccgagatcgtgtcc
atgggctacgaacgggagcaggtccttgcagccctgagagccagcttcaacaaccctcac
agagccgtggagtatcttttaatgggactccccggagacagggcaagtgcggccgaggtc
gagccccctcaagccggtagcagcggagctggtcggtcttcagcggtggaggcagatgaa
ggggctgcgacatcgggttctggaggacaccccctggatgttttacggaatttaccagag
tttgaagagttgagacgaatcattcagcacttcccatctttgcttccaggagtgctgcaa
cgcttatgtccacaggatcctcaattagaagatcaacttagacagtaccaagagtacttg
gttcatatgctaactaccgaggaggaggaagatggcagtgaaggaggaggaggaggtgaa
ggagttgacaatgcagaaactgcagaaacagtaagagaagatgacagctacattgaagta
acacctcaggaacaggcagctatagagaggttaaaggcattgggctttcctgaaggcctt
gtgatacaagcatattttgcttgtgagaagaatgagatcttagctgccagtttgttatcg
agcaggacttggaggaggactgaaagggactctcctgtggctcacatctcccgccgttcc
attcgttacgctgactttgtctcctacagcgtcttggatgacttggccttaggttcacca
tacttggcatcagaactagatgttggggcaggggcgggagtcacacgttgcaggggattc
cgagatagtcctcacctgcttggaatgactttggctaaggatctagaggaatggcaattt
tctggggctacctccatccagtatgtggatgaccttttagtggcctgttga

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